Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114798541
Identifier: 114798541
GI number: 114798541
Start: 215044
End: 216600
Strand: Direct
Name: 114798541
Synonym: HNE_0222
Alternate gene names: NA
Gene position: 215044-216600 (Clockwise)
Preceding gene: 114797105
Following gene: 114797391
Centisome position: 5.8
GC content: 59.09
Gene sequence:
>1557_bases ATGAAACACTATCTGAAATACTTGCCTGCGGTTCTGCCGCTTATAGCGGCAGCCTGCGCGGCGGCGCCGGAAACTCCGCA ACTGGCGCCCGGCAACGCGCCGGTGGTGGATGTACCTGTGGCGCCGGAAGCGGCGGAGACGGTATCCCCGGCGCTGTCTT TTGTATCAGTCCAGCCCGAGCTTTTTGGTGTGGCCGGATCGCTCTCGAATGTGTGGGCGGACTTTGACCGGGATGGCCAG CTTGATCTGGCCGTGTCGCTGAAGGGCGGCGCTGTGCGGCTTTACAGGCAGGATGATGGGGTGTTCACAAGCGTGGGTGA GGCGCTGGGATTGCCTGTTTCGGGCCCGGAATTCCGGGGCTTGAGCTGGGGTGATTATGACGAGGACGGCTATCCTGACC TGCTCGCGGGCGCAACGTCTCCAGAAGAACTGAGCCGTGTTTTCCGGAACGATGCCGGGACGGGTTTTGTGGATGTGTCC GCAGAGCTTGGCCTTACCATTCCGGGCCGGTCAGCGCGCCAGACCAACTGGATCGACTATGACAATGATGGTGATCTGGA TGTTTATTCGGCCAACCGTGCGGGTACGAACAAGCTGTTCGAAAACACCGGAGGTGTGTTTGCGGAAGTATTTGTGGGCG AGGGCCCAAGCGATGAGCGTCCAACGGTCGGAGCTTGCTGGTTCGATTATAATCTGGATGGGCGGCTTGATCTCTTCCTT GCCAACCAGTCCGGCGCTGAAGACGCCGTCTGGAAAAATGACATTTCCGGCTTCACCGATGTGGCTTCTGAAGCCGGTAT AATCACTACCGGGCGCACGAAGCAGGAAGGCGGCGTTGGCTGCGCGGTCGGAGATTTCGACAATGATGGCCGGCTGGACA TCTATTTCATCAATTATGGCGCCAACAAGCTCTACCGGAACACCGGCGAAGGCGGGTTCGAGGATGTCACCGAAGCCTCA GGAGTTGCAGACCCCGACCATGCGGTCGGCGGCGATTGGGGCGACTTCAACAATGACGGATTTCTCGACCTGTTCGTCGT GGGATATGAGGGGCCGTTCGGCGAGCAGGTACCTGTCAACTATCTGTACCTGAATGACGGGCAGGGGGGCTTCTCCAATA TCCTGCCACTCGATCACCCGATCAATGCCGGCGATCATGGTGTGATATGGGTAGACTATGATCTTGATGGCGCGCTCGAT CTTTCGCTGACGGATGGCTACGGACCGGAGGGCGGACATTTCGTGTTCCGGAACGAACTCGGTGCCGGGACGGGACTGAA TGTCATGGTGCTGAATTCTGCGGGACTTCGCGTTGTTCCGGGTGCGGAAGTTCGCCTGTATGACGCGGCCGGCGACATTC TTGCGACCCGCCTGGTTCACACCGGAGGCGGCTATAACGCGCAGAGCGCTGTTCCCGTACATTTCGGCCTGAAGGACGCC GAGTCCGTGACTGTGGAGGTGACGTTTCTGACTGCGCAGGGACGCGTCACTCAGAAAGTGACAGGGGTCGATCCGGTAGA ATGGGCAGGCAAGGCGCTGGTTGTTCAGCAAGAATAA
Upstream 100 bases:
>100_bases GGAAAAGTACCGCGAACTCTGGCTGCAACGCGAGCAGGTGGAAGCCAACCTGGCAGAGCGCACTCCGCTCAACCGATAGT CCCAATACGGATATACCGAG
Downstream 100 bases:
>100_bases CCGGGGACGTGCGATCAATGCTCATGGCTTGGTGCTCCTCGCGGGCGCCAAGCTTATTTTTGATCTATTACGCCCGCGGG ACATTTTCCTTCCGCAACAA
Product: FG-GAP repeat-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Domain Protein; FG-GAP Repeat-Containing Protein; ASPIC/UnbV; FG-GAP Repeat Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; ASPIC/UnbV Domain Protein; Integrin-Like Protein; TPR Repeat-Containing Protein; Protein Tyrosine Kinase Family; FG-GAP Repeat Protein/ASPIC/UnbV Domain Protein
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MKHYLKYLPAVLPLIAAACAAAPETPQLAPGNAPVVDVPVAPEAAETVSPALSFVSVQPELFGVAGSLSNVWADFDRDGQ LDLAVSLKGGAVRLYRQDDGVFTSVGEALGLPVSGPEFRGLSWGDYDEDGYPDLLAGATSPEELSRVFRNDAGTGFVDVS AELGLTIPGRSARQTNWIDYDNDGDLDVYSANRAGTNKLFENTGGVFAEVFVGEGPSDERPTVGACWFDYNLDGRLDLFL ANQSGAEDAVWKNDISGFTDVASEAGIITTGRTKQEGGVGCAVGDFDNDGRLDIYFINYGANKLYRNTGEGGFEDVTEAS GVADPDHAVGGDWGDFNNDGFLDLFVVGYEGPFGEQVPVNYLYLNDGQGGFSNILPLDHPINAGDHGVIWVDYDLDGALD LSLTDGYGPEGGHFVFRNELGAGTGLNVMVLNSAGLRVVPGAEVRLYDAAGDILATRLVHTGGGYNAQSAVPVHFGLKDA ESVTVEVTFLTAQGRVTQKVTGVDPVEWAGKALVVQQE
Sequences:
>Translated_518_residues MKHYLKYLPAVLPLIAAACAAAPETPQLAPGNAPVVDVPVAPEAAETVSPALSFVSVQPELFGVAGSLSNVWADFDRDGQ LDLAVSLKGGAVRLYRQDDGVFTSVGEALGLPVSGPEFRGLSWGDYDEDGYPDLLAGATSPEELSRVFRNDAGTGFVDVS AELGLTIPGRSARQTNWIDYDNDGDLDVYSANRAGTNKLFENTGGVFAEVFVGEGPSDERPTVGACWFDYNLDGRLDLFL ANQSGAEDAVWKNDISGFTDVASEAGIITTGRTKQEGGVGCAVGDFDNDGRLDIYFINYGANKLYRNTGEGGFEDVTEAS GVADPDHAVGGDWGDFNNDGFLDLFVVGYEGPFGEQVPVNYLYLNDGQGGFSNILPLDHPINAGDHGVIWVDYDLDGALD LSLTDGYGPEGGHFVFRNELGAGTGLNVMVLNSAGLRVVPGAEVRLYDAAGDILATRLVHTGGGYNAQSAVPVHFGLKDA ESVTVEVTFLTAQGRVTQKVTGVDPVEWAGKALVVQQE >Mature_518_residues MKHYLKYLPAVLPLIAAACAAAPETPQLAPGNAPVVDVPVAPEAAETVSPALSFVSVQPELFGVAGSLSNVWADFDRDGQ LDLAVSLKGGAVRLYRQDDGVFTSVGEALGLPVSGPEFRGLSWGDYDEDGYPDLLAGATSPEELSRVFRNDAGTGFVDVS AELGLTIPGRSARQTNWIDYDNDGDLDVYSANRAGTNKLFENTGGVFAEVFVGEGPSDERPTVGACWFDYNLDGRLDLFL ANQSGAEDAVWKNDISGFTDVASEAGIITTGRTKQEGGVGCAVGDFDNDGRLDIYFINYGANKLYRNTGEGGFEDVTEAS GVADPDHAVGGDWGDFNNDGFLDLFVVGYEGPFGEQVPVNYLYLNDGQGGFSNILPLDHPINAGDHGVIWVDYDLDGALD LSLTDGYGPEGGHFVFRNELGAGTGLNVMVLNSAGLRVVPGAEVRLYDAAGDILATRLVHTGGGYNAQSAVPVHFGLKDA ESVTVEVTFLTAQGRVTQKVTGVDPVEWAGKALVVQQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI47777317, Length=414, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54725; Mature: 54725
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHYLKYLPAVLPLIAAACAAAPETPQLAPGNAPVVDVPVAPEAAETVSPALSFVSVQPE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHEEEECHH LFGVAGSLSNVWADFDRDGQLDLAVSLKGGAVRLYRQDDGVFTSVGEALGLPVSGPEFRG HEEECCCHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCEEEHHHHHCCCCCCCCCCC LSWGDYDEDGYPDLLAGATSPEELSRVFRNDAGTGFVDVSAELGLTIPGRSARQTNWIDY CCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCCCCCCC DNDGDLDVYSANRAGTNKLFENTGGVFAEVFVGEGPSDERPTVGACWFDYNLDGRLDLFL CCCCCEEEEECCCCCCHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEE ANQSGAEDAVWKNDISGFTDVASEAGIITTGRTKQEGGVGCAVGDFDNDGRLDIYFINYG ECCCCCCCCHHHHCCCCHHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEEC ANKLYRNTGEGGFEDVTEASGVADPDHAVGGDWGDFNNDGFLDLFVVGYEGPFGEQVPVN CCHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEE YLYLNDGQGGFSNILPLDHPINAGDHGVIWVDYDLDGALDLSLTDGYGPEGGHFVFRNEL EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEECC GAGTGLNVMVLNSAGLRVVPGAEVRLYDAAGDILATRLVHTGGGYNAQSAVPVHFGLKDA CCCCCCEEEEECCCCEEEECCCCEEEEECCCCCEEEHEEECCCCCCCCCEEEEEECCCCC ESVTVEVTFLTAQGRVTQKVTGVDPVEWAGKALVVQQE CEEEEEEEEEEECCCEEEEECCCCCHHHCCCEEEEECC >Mature Secondary Structure MKHYLKYLPAVLPLIAAACAAAPETPQLAPGNAPVVDVPVAPEAAETVSPALSFVSVQPE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHEEEECHH LFGVAGSLSNVWADFDRDGQLDLAVSLKGGAVRLYRQDDGVFTSVGEALGLPVSGPEFRG HEEECCCHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCEEEHHHHHCCCCCCCCCCC LSWGDYDEDGYPDLLAGATSPEELSRVFRNDAGTGFVDVSAELGLTIPGRSARQTNWIDY CCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCEECCCCCCCCCCCCCC DNDGDLDVYSANRAGTNKLFENTGGVFAEVFVGEGPSDERPTVGACWFDYNLDGRLDLFL CCCCCEEEEECCCCCCHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEE ANQSGAEDAVWKNDISGFTDVASEAGIITTGRTKQEGGVGCAVGDFDNDGRLDIYFINYG ECCCCCCCCHHHHCCCCHHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEEC ANKLYRNTGEGGFEDVTEASGVADPDHAVGGDWGDFNNDGFLDLFVVGYEGPFGEQVPVN CCHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEE YLYLNDGQGGFSNILPLDHPINAGDHGVIWVDYDLDGALDLSLTDGYGPEGGHFVFRNEL EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEECC GAGTGLNVMVLNSAGLRVVPGAEVRLYDAAGDILATRLVHTGGGYNAQSAVPVHFGLKDA CCCCCCEEEEECCCCEEEECCCCEEEEECCCCCEEEHEEECCCCCCCCCEEEEEECCCCC ESVTVEVTFLTAQGRVTQKVTGVDPVEWAGKALVVQQE CEEEEEEEEEEECCCEEEEECCCCCHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA