Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is yqjG [H]

Identifier: 113476246

GI number: 113476246

Start: 4091507

End: 4092475

Strand: Reverse

Name: yqjG [H]

Synonym: Tery_2639

Alternate gene names: 113476246

Gene position: 4092475-4091507 (Counterclockwise)

Preceding gene: 113476251

Following gene: 113476245

Centisome position: 52.81

GC content: 35.29

Gene sequence:

>969_bases
ATGGTTAATAAACGCAGATCACTTCCACCCTCTCTAACAATTAAATTAGGAAAATGGGTTTGGACAACCCTCTGGCAAAC
AATGATGTCAAAACTTGCTCCAAGAAACAATTCAGGAGAATACATTCGCCCAGTCAGCCTATTTAGACAAACAGTAGGGA
TACAACCAGAGAATAAATATCAACCAGCTACCAAACGCTACCGCCTATTTGTTGGGCTAGGTTGCCCTTGGGCACACCGA
ACTATTGTAGTTAGAGCACTGAAAGGTTTGGAAGATGCTATATCAGTAACTATTGCTTCTCCAGCAGGAGATAAAGGCAT
TTGGGTATTTGAAGAAGAAGAAGAAGGATGCAATACTTTACCAGAATTATATAATTTAGCACAGCCTGGTTACAACGGCC
GTGCCACTGTACCTGTGTTGTGGGATGAGCAAACAAAAACTATTGTTAATAATGAAAGTGCAGATATTATTGTTATACTC
AATACTGAATTTAATCACTTTGCCAAAAATTCTAATCTTGACCTTTATCCAGAACAACTAAAAGCAAAAATAGACCAGTG
GAATGAAAAGATTTATCATACAGTAAATAATGGAGTTTATCGTTGTGGGTTTGCCCAAAGTCAAGAAGCTTATGAAAAAG
CTTGCCAAGAATTATTTACTACCTTAGATGAAATTGACAATATGCTTTCTACAAGTCGATATCTTTGTGGTGAGTCAGTA
ACATTAGCAGATGTACGTTTATTTACTACTTTATTCCGCTTTGATATTGTTTACTATGGATTATTTAAATGTAACTTACG
GAGAATTAAAGATTATAAATATTTGAGTGTTTATTTACAAGATTTATATAAACTTCCAGGAATAGCAGAGACTTGCAATT
TAGAGGCAGTGAAAAAAGATTATTATGGTAATCTTTTTCCTCTTAACCCAGGAGGTATAATTCCTTTAGGTCCAGATCTA
AATAGCTAG

Upstream 100 bases:

>100_bases
GTCAGGCGATCGCATCAAAAATCAACTAAATTCCTTTGAACCATATTATAGTATCTTTGCCTAAGCCCTGTTAATATTAA
AACAACGTATTATCAAACAA

Downstream 100 bases:

>100_bases
GTTTTACTGAAAAAAACAAAGGGGAAAGTTGGCTATCAGAGAGAAAAATTAGGATAACACATCTTGTTGGCTAATAGGCA
CAAAATTTTTGAGCTTTAAC

Product: glutathione S-transferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MVNKRRSLPPSLTIKLGKWVWTTLWQTMMSKLAPRNNSGEYIRPVSLFRQTVGIQPENKYQPATKRYRLFVGLGCPWAHR
TIVVRALKGLEDAISVTIASPAGDKGIWVFEEEEEGCNTLPELYNLAQPGYNGRATVPVLWDEQTKTIVNNESADIIVIL
NTEFNHFAKNSNLDLYPEQLKAKIDQWNEKIYHTVNNGVYRCGFAQSQEAYEKACQELFTTLDEIDNMLSTSRYLCGESV
TLADVRLFTTLFRFDIVYYGLFKCNLRRIKDYKYLSVYLQDLYKLPGIAETCNLEAVKKDYYGNLFPLNPGGIIPLGPDL
NS

Sequences:

>Translated_322_residues
MVNKRRSLPPSLTIKLGKWVWTTLWQTMMSKLAPRNNSGEYIRPVSLFRQTVGIQPENKYQPATKRYRLFVGLGCPWAHR
TIVVRALKGLEDAISVTIASPAGDKGIWVFEEEEEGCNTLPELYNLAQPGYNGRATVPVLWDEQTKTIVNNESADIIVIL
NTEFNHFAKNSNLDLYPEQLKAKIDQWNEKIYHTVNNGVYRCGFAQSQEAYEKACQELFTTLDEIDNMLSTSRYLCGESV
TLADVRLFTTLFRFDIVYYGLFKCNLRRIKDYKYLSVYLQDLYKLPGIAETCNLEAVKKDYYGNLFPLNPGGIIPLGPDL
NS
>Mature_322_residues
MVNKRRSLPPSLTIKLGKWVWTTLWQTMMSKLAPRNNSGEYIRPVSLFRQTVGIQPENKYQPATKRYRLFVGLGCPWAHR
TIVVRALKGLEDAISVTIASPAGDKGIWVFEEEEEGCNTLPELYNLAQPGYNGRATVPVLWDEQTKTIVNNESADIIVIL
NTEFNHFAKNSNLDLYPEQLKAKIDQWNEKIYHTVNNGVYRCGFAQSQEAYEKACQELFTTLDEIDNMLSTSRYLCGESV
TLADVRLFTTLFRFDIVYYGLFKCNLRRIKDYKYLSVYLQDLYKLPGIAETCNLEAVKKDYYGNLFPLNPGGIIPLGPDL
NS

Specific function: Unknown

COG id: COG0435

COG function: function code O; Predicted glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789489, Length=313, Percent_Identity=42.4920127795527, Blast_Score=249, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6322929, Length=364, Percent_Identity=34.0659340659341, Blast_Score=199, Evalue=7e-52,
Organism=Saccharomyces cerevisiae, GI6323906, Length=360, Percent_Identity=35.2777777777778, Blast_Score=194, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6321593, Length=334, Percent_Identity=30.8383233532934, Blast_Score=139, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR016639
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C [H]

EC number: NA

Molecular weight: Translated: 36824; Mature: 36824

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKRRSLPPSLTIKLGKWVWTTLWQTMMSKLAPRNNSGEYIRPVSLFRQTVGIQPENKY
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCC
QPATKRYRLFVGLGCPWAHRTIVVRALKGLEDAISVTIASPAGDKGIWVFEEEEEGCNTL
CCCCCEEEEEEECCCCHHHHHHHHHHHHCHHHHEEEEEECCCCCCCEEEEECCCCCCCHH
PELYNLAQPGYNGRATVPVLWDEQTKTIVNNESADIIVILNTEFNHFAKNSNLDLYPEQL
HHHHHHCCCCCCCCEEEEEEECCCCHHEECCCCCCEEEEEECCCHHHHCCCCCCCCHHHH
KAKIDQWNEKIYHTVNNGVYRCGFAQSQEAYEKACQELFTTLDEIDNMLSTSRYLCGESV
HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TLADVRLFTTLFRFDIVYYGLFKCNLRRIKDYKYLSVYLQDLYKLPGIAETCNLEAVKKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHH
YYGNLFPLNPGGIIPLGPDLNS
HCCCEEEECCCCEEECCCCCCC
>Mature Secondary Structure
MVNKRRSLPPSLTIKLGKWVWTTLWQTMMSKLAPRNNSGEYIRPVSLFRQTVGIQPENKY
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCC
QPATKRYRLFVGLGCPWAHRTIVVRALKGLEDAISVTIASPAGDKGIWVFEEEEEGCNTL
CCCCCEEEEEEECCCCHHHHHHHHHHHHCHHHHEEEEEECCCCCCCEEEEECCCCCCCHH
PELYNLAQPGYNGRATVPVLWDEQTKTIVNNESADIIVILNTEFNHFAKNSNLDLYPEQL
HHHHHHCCCCCCCCEEEEEEECCCCHHEECCCCCCEEEEEECCCHHHHCCCCCCCCHHHH
KAKIDQWNEKIYHTVNNGVYRCGFAQSQEAYEKACQELFTTLDEIDNMLSTSRYLCGESV
HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TLADVRLFTTLFRFDIVYYGLFKCNLRRIKDYKYLSVYLQDLYKLPGIAETCNLEAVKKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHH
YYGNLFPLNPGGIIPLGPDLNS
HCCCEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]