Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474645

Identifier: 113474645

GI number: 113474645

Start: 1297259

End: 1298641

Strand: Reverse

Name: 113474645

Synonym: Tery_0817

Alternate gene names: NA

Gene position: 1298641-1297259 (Counterclockwise)

Preceding gene: 113474646

Following gene: 113474641

Centisome position: 16.76

GC content: 32.47

Gene sequence:

>1383_bases
ATGTTAATTCTAAAAAATTATTCATATTTGTCTACTAAAATCTATTTTTTTGCCCGGGATCTTAGTCTATCTTTATTAAT
AGTAATTTGCTACATTAATCCTGTTTTTGCTAAAGTCAAAAATCTGGAAATAATTGAGGCTATTCCTGATAGAAATGAAG
GAAAAGTCACCCTCCGGGTTAAAGTCTACGACCAAAAAAATAAACCAATAAGAGGTATGCAAAAAAATGAGTTTAACTTA
ACAGTTTGTCCGCCAAAATCTGACCCTAAAACTGGAGAATGTCAAACTTTAAACCAGGCAGATATTAATTTGAAAATTCC
TCAACCTAAAGAATTACCTCCGGCTTGGGTAATTGTTTTATTAGATTTTAGTGGCAGTATGAAACAATTGGATAGTAGTG
GAGAAAAAACTAAATTAGAAGGAGCGATCGCTGCTATTAGAAAGTTCAATCAAGATTTAGCTAAAAAGGGAGAAAATACC
AGAATTTCCATCGTGCCCTTTGGCAAAGGAGGTAAAAATTGTCCGGGAAATCAAGTCAGGAAAAAACAACTAGATAATTT
TGTTTTAGCTGGTAAAAAAAAGGTCGAACAGACTCTCAATAAATTAGAGAGTAAACTAGATAATCTTTGTGCAGCTACAG
ATATTTATGAACCTTTGCGTCAGGCAGTACAATTTTTTGGTAATCCTGAAGATACTCGTTTTAACTTACCAATAAATTCT
AATTTACCTCAGCCAAGACGTTCAATAATTTTACTTTCTGATGGCTATCATAGTATTTATGGAAATAGAGAAAATGAACC
AGAATTAGAAGCACAAGATTTTGAAAAAATGATGTTTATGTTAAAAAGTTATCCTAATATTACTGTGCATACTTTAGGTT
ATGGTTTGACTCCCCAACAGTTGCAACAAAAATATGATTTAAAGCAATCTCCAACTATTAGAGATATTAGTAAAAGAGGC
AGAAAAAAAAGTAATGGATCAGAGAAATTAAGAGAAGTTGCTGCTGAAGAATTTGTTGATCAAAGGCGACTACAACAAAT
CGCAGGAGTAACTAATGGTATTGCTGAATTTTCGGGAAATGCTGAAAATATTTCTACCAGTTTGACCGAATTTTTAGAGG
CTTTATTTGATGAGTATCAAATTAATTATATTCAACCAATAAATGCTGACCGTGGCTCATTACATAATGTACAAGTTAGT
TTTAAGTTGCCTAATAATTTAGTAGATTCTGAATTAGAGCCTTATGTATTTCCTTGGGTGTCGCGCTCCCTACCTCCTCT
GACTAGAATCATCATTTTTTTATTCACATTAGCAGCATTATTAGGAGGTGGTGTAATACCGTTTTTATTATGGGCAAAAT
CAATTAAACGAGAGTTTCAATAA

Upstream 100 bases:

>100_bases
CTCAACTTTTTTAATAGAATAGAATATCTTGGCGATCGCCTGACTGAAAGTACACCAATTCAACTCAAATATAACGACTT
AATTACATTTAATGCTGAAA

Downstream 100 bases:

>100_bases
AAGTATAGGTGTGAGTAAATAAGTAAGTTGGCGTTAAAATTTGTCCCTATGTCACAAAATGTCAAGAACCCCCTCAACAG
ATAGCAATTCTCATACAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MLILKNYSYLSTKIYFFARDLSLSLLIVICYINPVFAKVKNLEIIEAIPDRNEGKVTLRVKVYDQKNKPIRGMQKNEFNL
TVCPPKSDPKTGECQTLNQADINLKIPQPKELPPAWVIVLLDFSGSMKQLDSSGEKTKLEGAIAAIRKFNQDLAKKGENT
RISIVPFGKGGKNCPGNQVRKKQLDNFVLAGKKKVEQTLNKLESKLDNLCAATDIYEPLRQAVQFFGNPEDTRFNLPINS
NLPQPRRSIILLSDGYHSIYGNRENEPELEAQDFEKMMFMLKSYPNITVHTLGYGLTPQQLQQKYDLKQSPTIRDISKRG
RKKSNGSEKLREVAAEEFVDQRRLQQIAGVTNGIAEFSGNAENISTSLTEFLEALFDEYQINYIQPINADRGSLHNVQVS
FKLPNNLVDSELEPYVFPWVSRSLPPLTRIIIFLFTLAALLGGGVIPFLLWAKSIKREFQ

Sequences:

>Translated_460_residues
MLILKNYSYLSTKIYFFARDLSLSLLIVICYINPVFAKVKNLEIIEAIPDRNEGKVTLRVKVYDQKNKPIRGMQKNEFNL
TVCPPKSDPKTGECQTLNQADINLKIPQPKELPPAWVIVLLDFSGSMKQLDSSGEKTKLEGAIAAIRKFNQDLAKKGENT
RISIVPFGKGGKNCPGNQVRKKQLDNFVLAGKKKVEQTLNKLESKLDNLCAATDIYEPLRQAVQFFGNPEDTRFNLPINS
NLPQPRRSIILLSDGYHSIYGNRENEPELEAQDFEKMMFMLKSYPNITVHTLGYGLTPQQLQQKYDLKQSPTIRDISKRG
RKKSNGSEKLREVAAEEFVDQRRLQQIAGVTNGIAEFSGNAENISTSLTEFLEALFDEYQINYIQPINADRGSLHNVQVS
FKLPNNLVDSELEPYVFPWVSRSLPPLTRIIIFLFTLAALLGGGVIPFLLWAKSIKREFQ
>Mature_460_residues
MLILKNYSYLSTKIYFFARDLSLSLLIVICYINPVFAKVKNLEIIEAIPDRNEGKVTLRVKVYDQKNKPIRGMQKNEFNL
TVCPPKSDPKTGECQTLNQADINLKIPQPKELPPAWVIVLLDFSGSMKQLDSSGEKTKLEGAIAAIRKFNQDLAKKGENT
RISIVPFGKGGKNCPGNQVRKKQLDNFVLAGKKKVEQTLNKLESKLDNLCAATDIYEPLRQAVQFFGNPEDTRFNLPINS
NLPQPRRSIILLSDGYHSIYGNRENEPELEAQDFEKMMFMLKSYPNITVHTLGYGLTPQQLQQKYDLKQSPTIRDISKRG
RKKSNGSEKLREVAAEEFVDQRRLQQIAGVTNGIAEFSGNAENISTSLTEFLEALFDEYQINYIQPINADRGSLHNVQVS
FKLPNNLVDSELEPYVFPWVSRSLPPLTRIIIFLFTLAALLGGGVIPFLLWAKSIKREFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52133; Mature: 52133

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS50234 VWFA ; PS00086 CYTOCHROME_P450

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILKNYSYLSTKIYFFARDLSLSLLIVICYINPVFAKVKNLEIIEAIPDRNEGKVTLRV
CEEEECCCHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEE
KVYDQKNKPIRGMQKNEFNLTVCPPKSDPKTGECQTLNQADINLKIPQPKELPPAWVIVL
EEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE
LDFSGSMKQLDSSGEKTKLEGAIAAIRKFNQDLAKKGENTRISIVPFGKGGKNCPGNQVR
EECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHH
KKQLDNFVLAGKKKVEQTLNKLESKLDNLCAATDIYEPLRQAVQFFGNPEDTRFNLPINS
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCC
NLPQPRRSIILLSDGYHSIYGNRENEPELEAQDFEKMMFMLKSYPNITVHTLGYGLTPQQ
CCCCCCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
LQQKYDLKQSPTIRDISKRGRKKSNGSEKLREVAAEEFVDQRRLQQIAGVTNGIAEFSGN
HHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AENISTSLTEFLEALFDEYQINYIQPINADRGSLHNVQVSFKLPNNLVDSELEPYVFPWV
HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEEEECCCCHHCCCCCCEEECHH
SRSLPPLTRIIIFLFTLAALLGGGVIPFLLWAKSIKREFQ
HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLILKNYSYLSTKIYFFARDLSLSLLIVICYINPVFAKVKNLEIIEAIPDRNEGKVTLRV
CEEEECCCHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEE
KVYDQKNKPIRGMQKNEFNLTVCPPKSDPKTGECQTLNQADINLKIPQPKELPPAWVIVL
EEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEE
LDFSGSMKQLDSSGEKTKLEGAIAAIRKFNQDLAKKGENTRISIVPFGKGGKNCPGNQVR
EECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHH
KKQLDNFVLAGKKKVEQTLNKLESKLDNLCAATDIYEPLRQAVQFFGNPEDTRFNLPINS
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCC
NLPQPRRSIILLSDGYHSIYGNRENEPELEAQDFEKMMFMLKSYPNITVHTLGYGLTPQQ
CCCCCCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
LQQKYDLKQSPTIRDISKRGRKKSNGSEKLREVAAEEFVDQRRLQQIAGVTNGIAEFSGN
HHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AENISTSLTEFLEALFDEYQINYIQPINADRGSLHNVQVSFKLPNNLVDSELEPYVFPWV
HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEEEECCCCHHCCCCCCEEECHH
SRSLPPLTRIIIFLFTLAALLGGGVIPFLLWAKSIKREFQ
HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA