| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474646
Identifier: 113474646
GI number: 113474646
Start: 1299130
End: 1299747
Strand: Reverse
Name: 113474646
Synonym: Tery_0819
Alternate gene names: NA
Gene position: 1299747-1299130 (Counterclockwise)
Preceding gene: 113474647
Following gene: 113474645
Centisome position: 16.77
GC content: 30.26
Gene sequence:
>618_bases ATGATAAATATACGAATTGAACTACCTGATAGTTGTAACTTTTCAGATTATTTCAAATTTAATTATTACCCGGAGGATAT CTTAAATTACTTTGGTTATCAATTAATTAAAGAAGAATTAGTTTTACCCAAGTCTCAACGACAAATTAATGGGTTAGAAA ATCTCAAGCAAAGATTTCGTAAAAGTCTCCCTTATATTACTTTAGATAGTGAGATAGCAAAGCGAGAATTTTTAATTGCT CCAGTCTTGATAGAATTAGTTGATTATTGTCAGGCTCAACTCAAAGTTTCCTATCCTTTAGAAGTTGAACCTCAGCTTAG AGGTTCTCTAGATTATTTTTTACAAGCGGGAAATAATTTATTAGTTATTGAGGCTAAGGATGAAAACTTAGAAAGAGGTT TTAAGCAACTAGCAGTTGAGTTAATTGCTCTTGATAAAAGAACAGAACCAGCACAAAATTTATTATATGGAGCTGTTTCT ATAGGAAAAATTTGGCAATTTGCTCTTTTGAAACGACTTGACAAGGAAGTTAAACAAGACCTAAATTTATATCGAGTACC TAATGATTTAGAAGATTTAATGAAAATTTTAGTAGCAATTCTCACTGGGGTTAAATAA
Upstream 100 bases:
>100_bases ATAAAAAAGTAAAGGAAGTAAAATCTCTATAACGGGTAGTTAGGAATACATTACAAAAGCTCAAAGAAATTAAAGAAGAG TATTAATATGGGTAAAAACT
Downstream 100 bases:
>100_bases CGAGTAGGGGAAGTAGAGAGATGGGAGGATTGAAATATAGATATAATTAACATATTTCAACATATATTGTATAACTTAAT TATCTGCTGGAAAAGGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MINIRIELPDSCNFSDYFKFNYYPEDILNYFGYQLIKEELVLPKSQRQINGLENLKQRFRKSLPYITLDSEIAKREFLIA PVLIELVDYCQAQLKVSYPLEVEPQLRGSLDYFLQAGNNLLVIEAKDENLERGFKQLAVELIALDKRTEPAQNLLYGAVS IGKIWQFALLKRLDKEVKQDLNLYRVPNDLEDLMKILVAILTGVK
Sequences:
>Translated_205_residues MINIRIELPDSCNFSDYFKFNYYPEDILNYFGYQLIKEELVLPKSQRQINGLENLKQRFRKSLPYITLDSEIAKREFLIA PVLIELVDYCQAQLKVSYPLEVEPQLRGSLDYFLQAGNNLLVIEAKDENLERGFKQLAVELIALDKRTEPAQNLLYGAVS IGKIWQFALLKRLDKEVKQDLNLYRVPNDLEDLMKILVAILTGVK >Mature_205_residues MINIRIELPDSCNFSDYFKFNYYPEDILNYFGYQLIKEELVLPKSQRQINGLENLKQRFRKSLPYITLDSEIAKREFLIA PVLIELVDYCQAQLKVSYPLEVEPQLRGSLDYFLQAGNNLLVIEAKDENLERGFKQLAVELIALDKRTEPAQNLLYGAVS IGKIWQFALLKRLDKEVKQDLNLYRVPNDLEDLMKILVAILTGVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23848; Mature: 23848
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINIRIELPDSCNFSDYFKFNYYPEDILNYFGYQLIKEELVLPKSQRQINGLENLKQRFR CEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH KSLPYITLDSEIAKREFLIAPVLIELVDYCQAQLKVSYPLEVEPQLRGSLDYFLQAGNNL HHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHCCHHHHHHCCCCE LVIEAKDENLERGFKQLAVELIALDKRTEPAQNLLYGAVSIGKIWQFALLKRLDKEVKQD EEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LNLYRVPNDLEDLMKILVAILTGVK CCEEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MINIRIELPDSCNFSDYFKFNYYPEDILNYFGYQLIKEELVLPKSQRQINGLENLKQRFR CEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH KSLPYITLDSEIAKREFLIAPVLIELVDYCQAQLKVSYPLEVEPQLRGSLDYFLQAGNNL HHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHCCHHHHHHCCCCE LVIEAKDENLERGFKQLAVELIALDKRTEPAQNLLYGAVSIGKIWQFALLKRLDKEVKQD EEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LNLYRVPNDLEDLMKILVAILTGVK CCEEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA