Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474391

Identifier: 113474391

GI number: 113474391

Start: 832685

End: 833020

Strand: Direct

Name: 113474391

Synonym: Tery_0527

Alternate gene names: NA

Gene position: 832685-833020 (Clockwise)

Preceding gene: 113474390

Following gene: 113474392

Centisome position: 10.74

GC content: 35.42

Gene sequence:

>336_bases
ATGGATATCATCAGTAAATATCAACAAATAATCGAGAAAATAATCGGCGACTATGCTAAGTTGCGCTATTCCTATAGCGA
AGTAGAGAGAAGAACGGTTTTCGACCGAGAACAAAAGCATTATTTATTAATGATTTTGGGAGTGGAAGGTCATAAAATGG
TTCATGGTTGCATACTTCATTTGGAAATTAGAGATGATAAAATTTGGATTCATCGCGACGGAACTGAAGATGGTATTGCA
AGAGAATTGTTAGCAGAAGGAGTTCCCAAGGACAAAATTGTTTTGGGATTTTATACTCCTGAAAAACGCAAGATAACTGA
TTTTGCAGTTTGTTAA

Upstream 100 bases:

>100_bases
TATTACTAATTATTTCCATATAATATTATATCCTAATAATCCTTTAAAATGGTAATCAAAATTTAGTGGTTTTCTAAAAA
TTAGAGGAGGTAATTATCGA

Downstream 100 bases:

>100_bases
TTTGATAAATATTTAAAGGAGAAAATTTTATGAGATTTATTAGTCCGAAAACTGACTTTGCTTTTAAAAGAATCTTCGGT
TCTAACCGCAGTCAAAAAAT

Product: FdxN element excision controlling factor protein

Products: NA

Alternate protein names: FdxN Element Excision Controlling Factor Protein; XisI Protein-Like Protein; XisI-Like FdxN Element Excision Controlling Factor Protein; FdxN Element Excision Controlling Factor Protein Like; DNA Element Excision Controlling Factor XisI-Like Protein; XisI Protein-Like; FdxN Element Excision Controlling Factor XisI-Like Protein; Excision Controlling Factor Protein XisI Like Protein

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MDIISKYQQIIEKIIGDYAKLRYSYSEVERRTVFDREQKHYLLMILGVEGHKMVHGCILHLEIRDDKIWIHRDGTEDGIA
RELLAEGVPKDKIVLGFYTPEKRKITDFAVC

Sequences:

>Translated_111_residues
MDIISKYQQIIEKIIGDYAKLRYSYSEVERRTVFDREQKHYLLMILGVEGHKMVHGCILHLEIRDDKIWIHRDGTEDGIA
RELLAEGVPKDKIVLGFYTPEKRKITDFAVC
>Mature_111_residues
MDIISKYQQIIEKIIGDYAKLRYSYSEVERRTVFDREQKHYLLMILGVEGHKMVHGCILHLEIRDDKIWIHRDGTEDGIA
RELLAEGVPKDKIVLGFYTPEKRKITDFAVC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13050; Mature: 13050

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIISKYQQIIEKIIGDYAKLRYSYSEVERRTVFDREQKHYLLMILGVEGHKMVHGCILH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEE
LEIRDDKIWIHRDGTEDGIARELLAEGVPKDKIVLGFYTPEKRKITDFAVC
EEEECCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MDIISKYQQIIEKIIGDYAKLRYSYSEVERRTVFDREQKHYLLMILGVEGHKMVHGCILH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEE
LEIRDDKIWIHRDGTEDGIARELLAEGVPKDKIVLGFYTPEKRKITDFAVC
EEEECCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA