Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474389

Identifier: 113474389

GI number: 113474389

Start: 830515

End: 831303

Strand: Direct

Name: 113474389

Synonym: Tery_0525

Alternate gene names: NA

Gene position: 830515-831303 (Clockwise)

Preceding gene: 113474388

Following gene: 113474390

Centisome position: 10.72

GC content: 40.18

Gene sequence:

>789_bases
ATGCAAACAGAAACTTTTGGGCTAAAAATACCTATTACTGAAGATGCTCGCCGATACGCTGAAAAATTTGCCGCTGAACA
AAAAGGTAAAGCTAAAAGAACTAAGGTTTATTTAAACACTTTAGCTGTATGTGCGGTGCATAATTTCCTAAAAATTGTGC
AGATAGAAACTGATCTAGAAAATAGTAGCGCCTGGAACCCCATAGAGCGTCTTTGTTATGATATAGCAGATTTATTTATT
CCCCACATAGATATTTCTGTGGAATGTCGCCCTGTATTACCAGACCAAGAAGAAATAACTTTGCCACCGGAAGTTAGACG
GGATCGGCTCGGTTATGTTTTTGTTAGGTTTGATAATGATTTACAGGAAGCAGAATTATTGGGATTTTTGTCTATTATGG
ATCCAGATGATGATTTTGAAGATTTAGAATTAGAGGAGTTGGAGCCTTTGGAGAATTTCTTGACTGTCTTGGAGCGAGTT
GAGTATATGTCTCAGGTTTATGAGGACCCTGTGTTTGCAAAGGTTGAGGAGTGTTTAAATATAAAATCTCGACTGGAGTT
GGTCCTTCAGTTGGAAAAAATACACCGCATGGAACCGCACTATTCCCACACGGCGAAGGCGACTGCGGTATTTTATAATT
ATCGCCCAGAGAGCAATTTGGCGACCGCGAGCAGAAGCAAGGAGAAAGTTAATGAGTTCACTGATGAGGAGTTAGAACAA
TTGCGAGAATTAGGAGATTTAGCGGAGGCATTAATGGAGAAATTGGCGCAGGTTTTGCCACAGAACTAA

Upstream 100 bases:

>100_bases
GTTTACGGACTTTTTGGCTACGGACTTGTAAGAAAATTTCTCAGGAACTATCCCCAGAACTATAACAAAATTTACAAGAA
TTAATTCAGGAGAAATAACT

Downstream 100 bases:

>100_bases
TGGAGATTAGGCGATCGCTCACATCGCTATCATCACAACTTTGTAGGGATGTTCGGTGCAACGTCCCTACTGTGGTTTAC
GGATATGAAAACTGTTGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MQTETFGLKIPITEDARRYAEKFAAEQKGKAKRTKVYLNTLAVCAVHNFLKIVQIETDLENSSAWNPIERLCYDIADLFI
PHIDISVECRPVLPDQEEITLPPEVRRDRLGYVFVRFDNDLQEAELLGFLSIMDPDDDFEDLELEELEPLENFLTVLERV
EYMSQVYEDPVFAKVEECLNIKSRLELVLQLEKIHRMEPHYSHTAKATAVFYNYRPESNLATASRSKEKVNEFTDEELEQ
LRELGDLAEALMEKLAQVLPQN

Sequences:

>Translated_262_residues
MQTETFGLKIPITEDARRYAEKFAAEQKGKAKRTKVYLNTLAVCAVHNFLKIVQIETDLENSSAWNPIERLCYDIADLFI
PHIDISVECRPVLPDQEEITLPPEVRRDRLGYVFVRFDNDLQEAELLGFLSIMDPDDDFEDLELEELEPLENFLTVLERV
EYMSQVYEDPVFAKVEECLNIKSRLELVLQLEKIHRMEPHYSHTAKATAVFYNYRPESNLATASRSKEKVNEFTDEELEQ
LRELGDLAEALMEKLAQVLPQN
>Mature_262_residues
MQTETFGLKIPITEDARRYAEKFAAEQKGKAKRTKVYLNTLAVCAVHNFLKIVQIETDLENSSAWNPIERLCYDIADLFI
PHIDISVECRPVLPDQEEITLPPEVRRDRLGYVFVRFDNDLQEAELLGFLSIMDPDDDFEDLELEELEPLENFLTVLERV
EYMSQVYEDPVFAKVEECLNIKSRLELVLQLEKIHRMEPHYSHTAKATAVFYNYRPESNLATASRSKEKVNEFTDEELEQ
LRELGDLAEALMEKLAQVLPQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30444; Mature: 30444

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTETFGLKIPITEDARRYAEKFAAEQKGKAKRTKVYLNTLAVCAVHNFLKIVQIETDLE
CCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
NSSAWNPIERLCYDIADLFIPHIDISVECRPVLPDQEEITLPPEVRRDRLGYVFVRFDND
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEECCC
LQEAELLGFLSIMDPDDDFEDLELEELEPLENFLTVLERVEYMSQVYEDPVFAKVEECLN
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
IKSRLELVLQLEKIHRMEPHYSHTAKATAVFYNYRPESNLATASRSKEKVNEFTDEELEQ
HHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHH
LRELGDLAEALMEKLAQVLPQN
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQTETFGLKIPITEDARRYAEKFAAEQKGKAKRTKVYLNTLAVCAVHNFLKIVQIETDLE
CCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
NSSAWNPIERLCYDIADLFIPHIDISVECRPVLPDQEEITLPPEVRRDRLGYVFVRFDND
CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEECCC
LQEAELLGFLSIMDPDDDFEDLELEELEPLENFLTVLERVEYMSQVYEDPVFAKVEECLN
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
IKSRLELVLQLEKIHRMEPHYSHTAKATAVFYNYRPESNLATASRSKEKVNEFTDEELEQ
HHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHH
LRELGDLAEALMEKLAQVLPQN
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA