Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is 110835152

Identifier: 110835152

GI number: 110835152

Start: 2612723

End: 2613889

Strand: Direct

Name: 110835152

Synonym: ABO_2291

Alternate gene names: NA

Gene position: 2612723-2613889 (Clockwise)

Preceding gene: 110835150

Following gene: 110835153

Centisome position: 83.74

GC content: 56.64

Gene sequence:

>1167_bases
ATGCCACCACTGCCCCCCAACATCATGCAAGGTCGCTGGCTACGCTGGTGGCTCACATTATCATTTGCAGTGATGTTCAG
CGGTGTCTTCCTGTTCAGCTCCCGCATCGGCTTACTTAACGTGCTAGATGTGCTTTTCTTTTTGCCCGGCCTAACCCTGC
TCACCCGCGCCGTAGTCAGTGGCGATCATCGCCTGATGACCTCGCCTTTTCTTGTTCCTCTTTATCTATTGCTCGCCTGG
GCCTTGCTCAGCCTAGCTTGGGCAGAAGAACCCAATTCCTCACGCACGGTGCGCGGAGTCGTGCAGATTGTGGTGATGGT
GGGGTTATTTCGTTGGCTACACCTGCATTTCCGTAACACCTTTAAACAAGCCATGGCCAACGGCGCCCTGTGTGCCGTGA
TTGTGTCTTCAATCGTTATGGTCAGCTACTACACCACTCAGCCATTCAGCAGCCCCCTGTTCAGCGAACCGGCAAACCTG
ATTTTTCGCATGCCTTCTCTTGACCCCTCCCTGGCACTGATGGCCATGGTGGCACCGACGTTCATTCTTCTGGCACAGGG
CATGGAAGAAGGGGCATCCGGCAAAGGCGCCCGCCGCTTGGTTGGTGCCGGGGTCGGCTTTGTGTTTCTTTGCCTAGCCT
CTTTGCCTCTGGGGTTAATGTGCATCATGCTTGCTGTCGCTTGGCTGCTTACCCGTAGCTCTCGCCGCTGGCTAAGCCTG
ATCCCGCTGGCCGCTGCCTTTTACCTGATGGTGCAAGGTGGCCACAGTGTGGCGGTGAACAACTACTTCGCTCACCCCCT
AATCGGTAACGGGCTGAATCACGAAACATTGAATGGAGTGCTCGCCTACAACGGCTCTCACCTACAGACCCTCGCTCACC
CCCGAAATATTTTTCTGCTATTGATTCACGGGCTGGGATTGGTCGGCCTGGTGCTGTTCATCGCCAGTTGGGTAAGCCCA
CTGACCGCCCTACTGCAGCGCCAGATCAACTGGCATGACAGTGCGGCCTACACCATTGCTGTTCTGCCAGGCCTGTGTAT
GGCCTACGCCGCCGGCGCATATCTACTCGTGCCATTCCATGCCAGCTGGCTTAGCCTTTGGCTCCCTTTAGCGCTTCTGC
TGGCCCGACTCAGCGAGCGCCCAAGCATCCATCCCAACAGTCGTTGA

Upstream 100 bases:

>100_bases
GCGTGAGTGTGTCACCCGGCAATTACGCATCACCTCGCTGTCAGGGTATCATTCAGTAGCCCTTAACCCTTGGCCAATTT
TAGAAGCAACAGGACACGCT

Downstream 100 bases:

>100_bases
GATTACCATGGGAAAACGCATCAACCGACCTTCACGCCTCTCCGATCCGCGCCTATACCCTAGCTGGCTAGGCGTCGGGC
TATTCTGGCTAGTCGGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MPPLPPNIMQGRWLRWWLTLSFAVMFSGVFLFSSRIGLLNVLDVLFFLPGLTLLTRAVVSGDHRLMTSPFLVPLYLLLAW
ALLSLAWAEEPNSSRTVRGVVQIVVMVGLFRWLHLHFRNTFKQAMANGALCAVIVSSIVMVSYYTTQPFSSPLFSEPANL
IFRMPSLDPSLALMAMVAPTFILLAQGMEEGASGKGARRLVGAGVGFVFLCLASLPLGLMCIMLAVAWLLTRSSRRWLSL
IPLAAAFYLMVQGGHSVAVNNYFAHPLIGNGLNHETLNGVLAYNGSHLQTLAHPRNIFLLLIHGLGLVGLVLFIASWVSP
LTALLQRQINWHDSAAYTIAVLPGLCMAYAAGAYLLVPFHASWLSLWLPLALLLARLSERPSIHPNSR

Sequences:

>Translated_388_residues
MPPLPPNIMQGRWLRWWLTLSFAVMFSGVFLFSSRIGLLNVLDVLFFLPGLTLLTRAVVSGDHRLMTSPFLVPLYLLLAW
ALLSLAWAEEPNSSRTVRGVVQIVVMVGLFRWLHLHFRNTFKQAMANGALCAVIVSSIVMVSYYTTQPFSSPLFSEPANL
IFRMPSLDPSLALMAMVAPTFILLAQGMEEGASGKGARRLVGAGVGFVFLCLASLPLGLMCIMLAVAWLLTRSSRRWLSL
IPLAAAFYLMVQGGHSVAVNNYFAHPLIGNGLNHETLNGVLAYNGSHLQTLAHPRNIFLLLIHGLGLVGLVLFIASWVSP
LTALLQRQINWHDSAAYTIAVLPGLCMAYAAGAYLLVPFHASWLSLWLPLALLLARLSERPSIHPNSR
>Mature_387_residues
PPLPPNIMQGRWLRWWLTLSFAVMFSGVFLFSSRIGLLNVLDVLFFLPGLTLLTRAVVSGDHRLMTSPFLVPLYLLLAWA
LLSLAWAEEPNSSRTVRGVVQIVVMVGLFRWLHLHFRNTFKQAMANGALCAVIVSSIVMVSYYTTQPFSSPLFSEPANLI
FRMPSLDPSLALMAMVAPTFILLAQGMEEGASGKGARRLVGAGVGFVFLCLASLPLGLMCIMLAVAWLLTRSSRRWLSLI
PLAAAFYLMVQGGHSVAVNNYFAHPLIGNGLNHETLNGVLAYNGSHLQTLAHPRNIFLLLIHGLGLVGLVLFIASWVSPL
TALLQRQINWHDSAAYTIAVLPGLCMAYAAGAYLLVPFHASWLSLWLPLALLLARLSERPSIHPNSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42621; Mature: 42490

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLPPNIMQGRWLRWWLTLSFAVMFSGVFLFSSRIGLLNVLDVLFFLPGLTLLTRAVVS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
GDHRLMTSPFLVPLYLLLAWALLSLAWAEEPNSSRTVRGVVQIVVMVGLFRWLHLHFRNT
CCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FKQAMANGALCAVIVSSIVMVSYYTTQPFSSPLFSEPANLIFRMPSLDPSLALMAMVAPT
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHH
FILLAQGMEEGASGKGARRLVGAGVGFVFLCLASLPLGLMCIMLAVAWLLTRSSRRWLSL
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IPLAAAFYLMVQGGHSVAVNNYFAHPLIGNGLNHETLNGVLAYNGSHLQTLAHPRNIFLL
HHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCHHHHCCEEEECCCHHHHHHCCHHHHHH
LIHGLGLVGLVLFIASWVSPLTALLQRQINWHDSAAYTIAVLPGLCMAYAAGAYLLVPFH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHH
ASWLSLWLPLALLLARLSERPSIHPNSR
HHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PPLPPNIMQGRWLRWWLTLSFAVMFSGVFLFSSRIGLLNVLDVLFFLPGLTLLTRAVVS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
GDHRLMTSPFLVPLYLLLAWALLSLAWAEEPNSSRTVRGVVQIVVMVGLFRWLHLHFRNT
CCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FKQAMANGALCAVIVSSIVMVSYYTTQPFSSPLFSEPANLIFRMPSLDPSLALMAMVAPT
HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHH
FILLAQGMEEGASGKGARRLVGAGVGFVFLCLASLPLGLMCIMLAVAWLLTRSSRRWLSL
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IPLAAAFYLMVQGGHSVAVNNYFAHPLIGNGLNHETLNGVLAYNGSHLQTLAHPRNIFLL
HHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCHHHHCCEEEECCCHHHHHHCCHHHHHH
LIHGLGLVGLVLFIASWVSPLTALLQRQINWHDSAAYTIAVLPGLCMAYAAGAYLLVPFH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHH
ASWLSLWLPLALLLARLSERPSIHPNSR
HHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA