Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835000

Identifier: 110835000

GI number: 110835000

Start: 2444363

End: 2445670

Strand: Direct

Name: 110835000

Synonym: ABO_2139

Alternate gene names: NA

Gene position: 2444363-2445670 (Clockwise)

Preceding gene: 110834999

Following gene: 110835001

Centisome position: 78.34

GC content: 55.58

Gene sequence:

>1308_bases
ATGCAACGCATGATGAAAAACCTGAAACAGAACGCTGCACTGCCGCTGTCCCTGCTTGCCGCTCTTACCATGGTCGGCTG
TAATGAAACGGGCTCCAGCTCACTGGGTAGCAGTGAAGATGAACACGAGCATGCAGAGAGTGATCACCCCGGCCGCTTAG
TGATTGCCGCTGGTGATGACGGCTCTCAGCTCTACATGTATGACCTTGAGGCCAATGCCTTGCTGCCCGGCACCTTGACC
CTGGATTATGATGCCAGCGCACTCTACACCAGCCCGGGCAAGCGTTTTGTTCTGGCGATACAGCGTGATAACGACCAGGT
ACAGGTCATCGATGGCGGCCTCTATTTGCATGACGACCACGTGGATGAAGTGATTCCCTCCTTCGCAGGAACGCTGACTG
GCCCGGCACCAACCCACTTTCGGGTTCATGGTGAACAGGCCGCTCTGTTCTATGATGGCGATGCAGACAACGCTGTCATG
GCCCAGATGGAGCTCCTCACCGATGAATCTTTGGAAACGGCCTCCAGCGAAGCCAGCCAAACGCTAACCAGCGCTCACCA
TGGCGTTGCAGAACCCCGTGGCGATGTGTTGCTCACCACCTTCCGCACCGCCGACGACGGCCTCCCGGAAACCGTTGACG
TCTACCATCAGCACAACGATCACTATCACAAGGAAGACACCATCTCACTAACCTGCCCAGAGCTACATGGCGCAGGCTCA
AACGAAGATTATTCTGTGTTTGGCTGCGACGACGGCATCCTGATCGTCCACCAGAACGGTGAGGAATTCACCGCAGAGCA
TGTGGATAACGCTACCCTAGGCCTTGCGGCTGGAGAGCGCATTAGCGGCTTCGACAGCCATCACGAACTGAGCCATTTCA
TAGGCTATGCCGGTGATCGAGTCTTCGTCATACATCCGGAAGATGGCGATGCTGAAGAACTGGATTGGACCGAAGGCGCC
ACCGTATCGCTAGAAAACCATAGCCTTGATCCCCACGCTGAGCACCTAGTGCTGCTGGATGATGCCGGTGACCTGCGCAT
CTTTGACACAACCGATTGGAGTGAACATGCGCACGTAGAAGATGCCATCGCGCCGGGCAATACTCATATGGTTGTGGCCG
GTGAGCCCGCACATGTTTATCTTTCCGATAGCGGCAACCAATTTATCCTCGTGGTGCACCTGGAGGAAGGCAGCGTTGAA
GAATCACTACCTTTGACCTTCCCGCCTGCGGCTCTTGCTTGGGCTGGCCTTGATACCGACCATGACGAAGAAGACCATGA
GGACGAAGACGATGGTCATGACCATTAA

Upstream 100 bases:

>100_bases
CCGTAGGCACCCGCATTGAATTTTGAGCCGCAACGTTAAACGGCATCCGTACCGGCGCCTTTACTCCGCCGGACGCAACA
ATATGAATATGGAGAACCCC

Downstream 100 bases:

>100_bases
TCGTCGAAACGGCTAACCGCAGGCTACTTGCAGGGGATTTTCTTCACCTTTTGCAAGCAGCCCGCCGTTTCCTCCCAAGA
CAGCGCTGGTCGCCGTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter; WD-40 Repeat-Containing Protein; 5-Methyltetrahydrofolate-Homocysteine Methyltransferase

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MQRMMKNLKQNAALPLSLLAALTMVGCNETGSSSLGSSEDEHEHAESDHPGRLVIAAGDDGSQLYMYDLEANALLPGTLT
LDYDASALYTSPGKRFVLAIQRDNDQVQVIDGGLYLHDDHVDEVIPSFAGTLTGPAPTHFRVHGEQAALFYDGDADNAVM
AQMELLTDESLETASSEASQTLTSAHHGVAEPRGDVLLTTFRTADDGLPETVDVYHQHNDHYHKEDTISLTCPELHGAGS
NEDYSVFGCDDGILIVHQNGEEFTAEHVDNATLGLAAGERISGFDSHHELSHFIGYAGDRVFVIHPEDGDAEELDWTEGA
TVSLENHSLDPHAEHLVLLDDAGDLRIFDTTDWSEHAHVEDAIAPGNTHMVVAGEPAHVYLSDSGNQFILVVHLEEGSVE
ESLPLTFPPAALAWAGLDTDHDEEDHEDEDDGHDH

Sequences:

>Translated_435_residues
MQRMMKNLKQNAALPLSLLAALTMVGCNETGSSSLGSSEDEHEHAESDHPGRLVIAAGDDGSQLYMYDLEANALLPGTLT
LDYDASALYTSPGKRFVLAIQRDNDQVQVIDGGLYLHDDHVDEVIPSFAGTLTGPAPTHFRVHGEQAALFYDGDADNAVM
AQMELLTDESLETASSEASQTLTSAHHGVAEPRGDVLLTTFRTADDGLPETVDVYHQHNDHYHKEDTISLTCPELHGAGS
NEDYSVFGCDDGILIVHQNGEEFTAEHVDNATLGLAAGERISGFDSHHELSHFIGYAGDRVFVIHPEDGDAEELDWTEGA
TVSLENHSLDPHAEHLVLLDDAGDLRIFDTTDWSEHAHVEDAIAPGNTHMVVAGEPAHVYLSDSGNQFILVVHLEEGSVE
ESLPLTFPPAALAWAGLDTDHDEEDHEDEDDGHDH
>Mature_435_residues
MQRMMKNLKQNAALPLSLLAALTMVGCNETGSSSLGSSEDEHEHAESDHPGRLVIAAGDDGSQLYMYDLEANALLPGTLT
LDYDASALYTSPGKRFVLAIQRDNDQVQVIDGGLYLHDDHVDEVIPSFAGTLTGPAPTHFRVHGEQAALFYDGDADNAVM
AQMELLTDESLETASSEASQTLTSAHHGVAEPRGDVLLTTFRTADDGLPETVDVYHQHNDHYHKEDTISLTCPELHGAGS
NEDYSVFGCDDGILIVHQNGEEFTAEHVDNATLGLAAGERISGFDSHHELSHFIGYAGDRVFVIHPEDGDAEELDWTEGA
TVSLENHSLDPHAEHLVLLDDAGDLRIFDTTDWSEHAHVEDAIAPGNTHMVVAGEPAHVYLSDSGNQFILVVHLEEGSVE
ESLPLTFPPAALAWAGLDTDHDEEDHEDEDDGHDH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47170; Mature: 47170

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRMMKNLKQNAALPLSLLAALTMVGCNETGSSSLGSSEDEHEHAESDHPGRLVIAAGDD
CHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCC
GSQLYMYDLEANALLPGTLTLDYDASALYTSPGKRFVLAIQRDNDQVQVIDGGLYLHDDH
CCEEEEEEECCCEECCCEEEEECCCCEEEECCCCEEEEEEEECCCEEEEEECCEEEECCC
VDEVIPSFAGTLTGPAPTHFRVHGEQAALFYDGDADNAVMAQMELLTDESLETASSEASQ
HHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHH
TLTSAHHGVAEPRGDVLLTTFRTADDGLPETVDVYHQHNDHYHKEDTISLTCPELHGAGS
HHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHEECCCCCCCCCCEEEEECCHHCCCCC
NEDYSVFGCDDGILIVHQNGEEFTAEHVDNATLGLAAGERISGFDSHHELSHFIGYAGDR
CCCEEEEECCCCEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCE
VFVIHPEDGDAEELDWTEGATVSLENHSLDPHAEHLVLLDDAGDLRIFDTTDWSEHAHVE
EEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHH
DAIAPGNTHMVVAGEPAHVYLSDSGNQFILVVHLEEGSVEESLPLTFPPAALAWAGLDTD
HHCCCCCEEEEEECCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCHHHEEECCCCC
HDEEDHEDEDDGHDH
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MQRMMKNLKQNAALPLSLLAALTMVGCNETGSSSLGSSEDEHEHAESDHPGRLVIAAGDD
CHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCC
GSQLYMYDLEANALLPGTLTLDYDASALYTSPGKRFVLAIQRDNDQVQVIDGGLYLHDDH
CCEEEEEEECCCEECCCEEEEECCCCEEEECCCCEEEEEEEECCCEEEEEECCEEEECCC
VDEVIPSFAGTLTGPAPTHFRVHGEQAALFYDGDADNAVMAQMELLTDESLETASSEASQ
HHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHH
TLTSAHHGVAEPRGDVLLTTFRTADDGLPETVDVYHQHNDHYHKEDTISLTCPELHGAGS
HHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHEECCCCCCCCCCEEEEECCHHCCCCC
NEDYSVFGCDDGILIVHQNGEEFTAEHVDNATLGLAAGERISGFDSHHELSHFIGYAGDR
CCCEEEEECCCCEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCE
VFVIHPEDGDAEELDWTEGATVSLENHSLDPHAEHLVLLDDAGDLRIFDTTDWSEHAHVE
EEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCHH
DAIAPGNTHMVVAGEPAHVYLSDSGNQFILVVHLEEGSVEESLPLTFPPAALAWAGLDTD
HHCCCCCEEEEEECCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCHHHEEECCCCC
HDEEDHEDEDDGHDH
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA