| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835001
Identifier: 110835001
GI number: 110835001
Start: 2445833
End: 2446351
Strand: Direct
Name: 110835001
Synonym: ABO_2140
Alternate gene names: NA
Gene position: 2445833-2446351 (Clockwise)
Preceding gene: 110835000
Following gene: 110835007
Centisome position: 78.39
GC content: 52.02
Gene sequence:
>519_bases ATGAAAAAAGTACTGTTTGCCGCGGCTTTGACAATGCCCCTTGTCGCCAACGCCGGCGGTTTTGCTGGTATTGATATCAT TAGCAGCAAAATTGAACCTGATAACACCACGTCTAGCGCCAAGCCCGAAGCGCTGCAATTCAAATTCGGCAGCTGGATCA ACAAGGATGAGACCCTTGGTGGTGAAGTGCGTCTGGGCTTGGGCATTGATGAAGATGAACTGAGCAACAATGTTGACGTG GAAATCGACCGTTACTACGGCGCCTATTTCCGTGGCCAATTCCCCAACACCATGCCTGTGCGCCCCTACGGACTGATCGG TGTCACCTACATGGAAACCACCGAGAAGAGTGATTTGGGTGGTTCTGACGGAGAAAACTACAAAGACCTGTCACTGGGCC TCGGTGTAGATTTCACCATCACCAAGACCCTGTTCATCAACCTAGAGTATATGCGGCTCGTGGATCGCAGCGGTGACGAA ATCACTCATGTGGGGCTGGGCCTGAACGGCCGATTCTGA
Upstream 100 bases:
>100_bases CGCCGTTTCCTCCCAAGACAGCGCTGGTCGCCGTCGACCTCACTTTTCACTACAATCAGTCTATTATTGCGTCGAGACTT AATACCCTGTGGGAGAACCC
Downstream 100 bases:
>100_bases TTCCACCACAGCACTCACGCTGCACAAAAACGCCCACCATTATTTAGTGGGCGTTTTTTTGTAAGGCTCAAAAAAAAACA GTTTGTCATGCGCTACACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKKVLFAAALTMPLVANAGGFAGIDIISSKIEPDNTTSSAKPEALQFKFGSWINKDETLGGEVRLGLGIDEDELSNNVDV EIDRYYGAYFRGQFPNTMPVRPYGLIGVTYMETTEKSDLGGSDGENYKDLSLGLGVDFTITKTLFINLEYMRLVDRSGDE ITHVGLGLNGRF
Sequences:
>Translated_172_residues MKKVLFAAALTMPLVANAGGFAGIDIISSKIEPDNTTSSAKPEALQFKFGSWINKDETLGGEVRLGLGIDEDELSNNVDV EIDRYYGAYFRGQFPNTMPVRPYGLIGVTYMETTEKSDLGGSDGENYKDLSLGLGVDFTITKTLFINLEYMRLVDRSGDE ITHVGLGLNGRF >Mature_172_residues MKKVLFAAALTMPLVANAGGFAGIDIISSKIEPDNTTSSAKPEALQFKFGSWINKDETLGGEVRLGLGIDEDELSNNVDV EIDRYYGAYFRGQFPNTMPVRPYGLIGVTYMETTEKSDLGGSDGENYKDLSLGLGVDFTITKTLFINLEYMRLVDRSGDE ITHVGLGLNGRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18817; Mature: 18817
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLFAAALTMPLVANAGGFAGIDIISSKIEPDNTTSSAKPEALQFKFGSWINKDETLG CCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC GEVRLGLGIDEDELSNNVDVEIDRYYGAYFRGQFPNTMPVRPYGLIGVTYMETTEKSDLG CEEEEECCCCHHHHCCCCCEEEECEECEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCC GSDGENYKDLSLGLGVDFTITKTLFINLEYMRLVDRSGDEITHVGLGLNGRF CCCCCCCEEEEECCCCCEEEEEEEEEEEHHHEEECCCCCCEEEEECCCCCCC >Mature Secondary Structure MKKVLFAAALTMPLVANAGGFAGIDIISSKIEPDNTTSSAKPEALQFKFGSWINKDETLG CCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC GEVRLGLGIDEDELSNNVDVEIDRYYGAYFRGQFPNTMPVRPYGLIGVTYMETTEKSDLG CEEEEECCCCHHHHCCCCCEEEECEECEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCC GSDGENYKDLSLGLGVDFTITKTLFINLEYMRLVDRSGDEITHVGLGLNGRF CCCCCCCEEEEECCCCCEEEEEEEEEEEHHHEEECCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA