Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487109

Identifier: 103487109

GI number: 103487109

Start: 1702995

End: 1703732

Strand: Direct

Name: 103487109

Synonym: Sala_1624

Alternate gene names: NA

Gene position: 1702995-1703732 (Clockwise)

Preceding gene: 103487107

Following gene: 103487110

Centisome position: 50.91

GC content: 63.01

Gene sequence:

>738_bases
ATGACAAAACAGGCAATCCTTCATCGCATGGTCATGCCGGGGCACATCTGCCCCTATGGCCTCAAAGCCAAATATCTGCT
CGAGCGCCGCGGCTATAGAGTCGACGACCGCTGGCTGACGACGCGCGAGCAGACCGATGCGTTCAAGGCGCAGCATGGCG
TCCAGACGACGCCGCAGACCTTCATCGACGGGGTGCGGATCGGCGGTTATGACGATCTGCGCCGCCATTTCGGGCTGAAG
GTCGCCGACCCCGATGCGGCCAGCTATACGCCCGTGATCGCGCTGTTCGCGATGACCGCGCTGATGGCGCTGGCGGCGAG
CTTTGCCGCCTATGGCGATGCCTTTACGCTTCGCGCCGCCGAATGGTTCATCTCTTTCAGCATGATGGTGCTCGCGCTGC
TGAAATTGCAGGATGTGGGCAGGTTCGCGACGATGTTCCTCAATTACGACCTGCTCGCGCGCCGCTGGGTTCCCTATGCG
AGCATCTATCCCTTTGCCGAGGGGCTGGCGGGCGTGTTGATGACCGCGCACGCGCTGCCCTGGCTGTCGATCCCGCTGGC
GCTGTTTATCGGCGGCATCGGCGCGGTGTCGGTGTTCAAGGCGGTCTATATCGACCGGCGCGACATCAAATGCGCGTGCG
TCGGCGGCAGCAGCAAGGTGCCGCTGGGCTTCGTGTCGCTGACCGAAAATCTGATGATGGTCGCGATGGCGCTGTGGATG
GCGCGCATGTGGGTGTGA

Upstream 100 bases:

>100_bases
CGTATCGTCTCTACCCCGACATCGCCCGCGGCGGCCAGTTTGCCGATCGTCATCTGCATCGCTTGACTCCGTACCATGGT
ACGGATGCTATAGGAGGGGC

Downstream 100 bases:

>100_bases
GGACGTCGCCGAACTGTCATTGATGAAACGCAGAGCTGGGCTATCGAGGGGCATCGATTCGCCCCGACGGAGCCCAGCCC
ATGTACAACCGCCGCCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane Associated Glutaredoxin; DoxX Subfamily; Glutaredoxin Like Protein; Glutaredoxine Domain-Containing Protein

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTKQAILHRMVMPGHICPYGLKAKYLLERRGYRVDDRWLTTREQTDAFKAQHGVQTTPQTFIDGVRIGGYDDLRRHFGLK
VADPDAASYTPVIALFAMTALMALAASFAAYGDAFTLRAAEWFISFSMMVLALLKLQDVGRFATMFLNYDLLARRWVPYA
SIYPFAEGLAGVLMTAHALPWLSIPLALFIGGIGAVSVFKAVYIDRRDIKCACVGGSSKVPLGFVSLTENLMMVAMALWM
ARMWV

Sequences:

>Translated_245_residues
MTKQAILHRMVMPGHICPYGLKAKYLLERRGYRVDDRWLTTREQTDAFKAQHGVQTTPQTFIDGVRIGGYDDLRRHFGLK
VADPDAASYTPVIALFAMTALMALAASFAAYGDAFTLRAAEWFISFSMMVLALLKLQDVGRFATMFLNYDLLARRWVPYA
SIYPFAEGLAGVLMTAHALPWLSIPLALFIGGIGAVSVFKAVYIDRRDIKCACVGGSSKVPLGFVSLTENLMMVAMALWM
ARMWV
>Mature_244_residues
TKQAILHRMVMPGHICPYGLKAKYLLERRGYRVDDRWLTTREQTDAFKAQHGVQTTPQTFIDGVRIGGYDDLRRHFGLKV
ADPDAASYTPVIALFAMTALMALAASFAAYGDAFTLRAAEWFISFSMMVLALLKLQDVGRFATMFLNYDLLARRWVPYAS
IYPFAEGLAGVLMTAHALPWLSIPLALFIGGIGAVSVFKAVYIDRRDIKCACVGGSSKVPLGFVSLTENLMMVAMALWMA
RMWV

Specific function: Unknown

COG id: COG0695

COG function: function code O; Glutaredoxin and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27291; Mature: 27159

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQAILHRMVMPGHICPYGLKAKYLLERRGYRVDDRWLTTREQTDAFKAQHGVQTTPQT
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHCCCCCCHHH
FIDGVRIGGYDDLRRHFGLKVADPDAASYTPVIALFAMTALMALAASFAAYGDAFTLRAA
HHCCCCCCCHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EWFISFSMMVLALLKLQDVGRFATMFLNYDLLARRWVPYASIYPFAEGLAGVLMTAHALP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
WLSIPLALFIGGIGAVSVFKAVYIDRRDIKCACVGGSSKVPLGFVSLTENLMMVAMALWM
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
ARMWV
HHHCC
>Mature Secondary Structure 
TKQAILHRMVMPGHICPYGLKAKYLLERRGYRVDDRWLTTREQTDAFKAQHGVQTTPQT
CHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHCCCCCCHHH
FIDGVRIGGYDDLRRHFGLKVADPDAASYTPVIALFAMTALMALAASFAAYGDAFTLRAA
HHCCCCCCCHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EWFISFSMMVLALLKLQDVGRFATMFLNYDLLARRWVPYASIYPFAEGLAGVLMTAHALP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
WLSIPLALFIGGIGAVSVFKAVYIDRRDIKCACVGGSSKVPLGFVSLTENLMMVAMALWM
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
ARMWV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA