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The map label for this gene is 103487107

Identifier: 103487107

GI number: 103487107

Start: 1702201

End: 1702488

Strand: Direct

Name: 103487107

Synonym: Sala_1622

Alternate gene names: NA

Gene position: 1702201-1702488 (Clockwise)

Preceding gene: 103487106

Following gene: 103487109

Centisome position: 50.89

GC content: 55.21

Gene sequence:

>288_bases
ATGCACCCTGACGCTCAGCCCGCAGTTTACATCATGACCAACCGGAAGGGCGGCGTGCTATACACCGGCGTCACGTCGAA
TCTTATCGGTCGTGTATGGCAACACCGGGAAAGCGGACCGGCTTTTCTGCGCGCTATCGATGCGACAAGCTCGTTTGGTT
CGAAGTACATGGTGACATGCATTCAGCTATCAGCCGCGAGAAGCAGATCAAGGCGGGATCGCGTGCCAAGAAAATCGCTC
TTATTGAAGCCGGCAATCCAGAGTGGCGGGACCTGTTTCCTGAACTAA

Upstream 100 bases:

>100_bases
CGTGCACGACGGCGACGTGATGCATTTCCTGCATAGTTGATCGCGAGGCTGACCAAACTTCGTCATTGCGAGGAGCGTAG
CGACGAAGCAATCTCCAGCG

Downstream 100 bases:

>100_bases
CCGGAGAATAGGCTGATAGCTGGAGATTGCTTCGTCGCTCTGCTCCTGGCAATGACGGATGCTTCAGGGCTCGAACGCCG
CCATAATCGGGCACGGCCCC

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MHPDAQPAVYIMTNRKGGVLYTGVTSNLIGRVWQHRESGPAFLRAIDATSSFGSKYMVTCIQLSAARSRSRRDRVPRKSL
LLKPAIQSGGTCFLN

Sequences:

>Translated_95_residues
MHPDAQPAVYIMTNRKGGVLYTGVTSNLIGRVWQHRESGPAFLRAIDATSSFGSKYMVTCIQLSAARSRSRRDRVPRKSL
LLKPAIQSGGTCFLN
>Mature_95_residues
MHPDAQPAVYIMTNRKGGVLYTGVTSNLIGRVWQHRESGPAFLRAIDATSSFGSKYMVTCIQLSAARSRSRRDRVPRKSL
LLKPAIQSGGTCFLN

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10467; Mature: 10467

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPDAQPAVYIMTNRKGGVLYTGVTSNLIGRVWQHRESGPAFLRAIDATSSFGSKYMVTC
CCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHH
IQLSAARSRSRRDRVPRKSLLLKPAIQSGGTCFLN
HHHHHHHHHHHHHCCCHHHHEECCCCCCCCEEEEC
>Mature Secondary Structure
MHPDAQPAVYIMTNRKGGVLYTGVTSNLIGRVWQHRESGPAFLRAIDATSSFGSKYMVTC
CCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHH
IQLSAARSRSRRDRVPRKSLLLKPAIQSGGTCFLN
HHHHHHHHHHHHHCCCHHHHEECCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA