Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485952

Identifier: 103485952

GI number: 103485952

Start: 471043

End: 471864

Strand: Direct

Name: 103485952

Synonym: Sala_0459

Alternate gene names: NA

Gene position: 471043-471864 (Clockwise)

Preceding gene: 103485951

Following gene: 103485954

Centisome position: 14.08

GC content: 65.57

Gene sequence:

>822_bases
GTGAAGCGTCTTGTCCTGACCATCGCCCTTGTGGCGGGCCTTCCCGCCGCGGCCAATGCCGCGACCTGCGAACAGAGTTT
CGAGAAGAAGGGCAATCCGGTGACGGGGCTGCGCTTCATCGCGACGACCAATGTACCGGGGATGAGCGCCGCGAGCGCGG
TCGGCCAATTGAACGGCATCGTCGCGGCGAAAGGTTATGACATATTGGCCGCCGAGCAGGAGAGCGGCACGATGCTGATC
GAACAGCCGCAGACGGGCAAGTCGCGCTCCTTCCCGATCGAGATCGCCGCCGACGGCGCGGGCAATGTGCGGATGGAAGC
AAGGCTGCGCGCGGCGATGGGCGTCCCCGAAGCCGCGGCGAAGGCGGAGATGTGCGGCATCCTGGCGCAGCTCAAGGGCG
GCAAGGCGGGCGAGGCGCTCGCGGCGAAGGGCATGAAGGCGACCACTGCGCCCGGCGCGCCGATCCGCATGAGCGTGCTG
CGCTTTTCGCAGGACATCACCGGCGAGGCGGACAAGAACAGCGCCGCGGTGCCGCTGCGTTACAAGAACAAATCCTTCAC
GCTTTACGGCCCCGTCGCCTATGTCGGTCCGGTCGGCGACAGCTATCGCGTCGAATGGAAGCTGGTGTCTAACGTGCTGA
CCGACATCGTTCCGGGCCGTTCGTCGGCGGGGATGAATGTGAATTGCGTACTGGCGAAGGGGCAGGGGCCTTATGCGCTG
CAACTGAAGCCCGGCAAACATGCCGAGCTGACGGGGACGTTCGACCGGCTCGATTACGGCCTGTCGCTCGTGTGGCTGAA
GGATTGCCGCCCGGTGAAGTGA

Upstream 100 bases:

>100_bases
AAAAGCTGTTGCAACGATATGGTTTTGCGACAATTTCCGGCGACATGCCGGGAACTGGAGACCAGTCTTGCGGTGCCGGA
TTCGTGACGAAGGAGGATTT

Downstream 100 bases:

>100_bases
CGGGCGGGGTTAATCCCCGCCCGCGCGGTCGACCATATCCATGAAATCGCGCGCGGCGTCGCGTTCGCTTGCGTCCTTGA
ACGCGACGTCGAGGTCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKRLVLTIALVAGLPAAANAATCEQSFEKKGNPVTGLRFIATTNVPGMSAASAVGQLNGIVAAKGYDILAAEQESGTMLI
EQPQTGKSRSFPIEIAADGAGNVRMEARLRAAMGVPEAAAKAEMCGILAQLKGGKAGEALAAKGMKATTAPGAPIRMSVL
RFSQDITGEADKNSAAVPLRYKNKSFTLYGPVAYVGPVGDSYRVEWKLVSNVLTDIVPGRSSAGMNVNCVLAKGQGPYAL
QLKPGKHAELTGTFDRLDYGLSLVWLKDCRPVK

Sequences:

>Translated_273_residues
MKRLVLTIALVAGLPAAANAATCEQSFEKKGNPVTGLRFIATTNVPGMSAASAVGQLNGIVAAKGYDILAAEQESGTMLI
EQPQTGKSRSFPIEIAADGAGNVRMEARLRAAMGVPEAAAKAEMCGILAQLKGGKAGEALAAKGMKATTAPGAPIRMSVL
RFSQDITGEADKNSAAVPLRYKNKSFTLYGPVAYVGPVGDSYRVEWKLVSNVLTDIVPGRSSAGMNVNCVLAKGQGPYAL
QLKPGKHAELTGTFDRLDYGLSLVWLKDCRPVK
>Mature_273_residues
MKRLVLTIALVAGLPAAANAATCEQSFEKKGNPVTGLRFIATTNVPGMSAASAVGQLNGIVAAKGYDILAAEQESGTMLI
EQPQTGKSRSFPIEIAADGAGNVRMEARLRAAMGVPEAAAKAEMCGILAQLKGGKAGEALAAKGMKATTAPGAPIRMSVL
RFSQDITGEADKNSAAVPLRYKNKSFTLYGPVAYVGPVGDSYRVEWKLVSNVLTDIVPGRSSAGMNVNCVLAKGQGPYAL
QLKPGKHAELTGTFDRLDYGLSLVWLKDCRPVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28523; Mature: 28523

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLVLTIALVAGLPAAANAATCEQSFEKKGNPVTGLRFIATTNVPGMSAASAVGQLNGI
CCHHEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCE
VAAKGYDILAAEQESGTMLIEQPQTGKSRSFPIEIAADGAGNVRMEARLRAAMGVPEAAA
EEECCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCHHHH
KAEMCGILAQLKGGKAGEALAAKGMKATTAPGAPIRMSVLRFSQDITGEADKNSAAVPLR
HHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEHEEHHHHCCCCCCCCCCCEEEEE
YKNKSFTLYGPVAYVGPVGDSYRVEWKLVSNVLTDIVPGRSSAGMNVNCVLAKGQGPYAL
ECCCEEEEEECEEEECCCCCCEEEEHEEHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEE
QLKPGKHAELTGTFDRLDYGLSLVWLKDCRPVK
EECCCCCCEEEECHHHHCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKRLVLTIALVAGLPAAANAATCEQSFEKKGNPVTGLRFIATTNVPGMSAASAVGQLNGI
CCHHEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCE
VAAKGYDILAAEQESGTMLIEQPQTGKSRSFPIEIAADGAGNVRMEARLRAAMGVPEAAA
EEECCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCHHHH
KAEMCGILAQLKGGKAGEALAAKGMKATTAPGAPIRMSVLRFSQDITGEADKNSAAVPLR
HHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEHEEHHHHCCCCCCCCCCCEEEEE
YKNKSFTLYGPVAYVGPVGDSYRVEWKLVSNVLTDIVPGRSSAGMNVNCVLAKGQGPYAL
ECCCEEEEEECEEEECCCCCCEEEEHEEHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEE
QLKPGKHAELTGTFDRLDYGLSLVWLKDCRPVK
EECCCCCCEEEECHHHHCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA