Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485951

Identifier: 103485951

GI number: 103485951

Start: 470427

End: 470909

Strand: Direct

Name: 103485951

Synonym: Sala_0458

Alternate gene names: NA

Gene position: 470427-470909 (Clockwise)

Preceding gene: 103485949

Following gene: 103485952

Centisome position: 14.06

GC content: 62.53

Gene sequence:

>483_bases
ATGGAACTGAAATTCAGGGTCGCGGCGCGGATCGCCAAGCCGATCGACGAGGTGTTCGAGGCGGTCGCCGACCCCGCAAA
GCTGTCGGCTTATTTCACCACCGGGGGCGCGAAGGGACGGCTGGAAACCGGCGCGACGGTGACATGGGATTTCCACGACT
ATCCCGGCGCCTTTCCGGTTTATGTGATCGAAGTGGTGAAGGACGAACGCATCGTCCTCGAATGGCAGGCGAGCGAGGGC
GAGGCGCCGAATGTCGAGGGCGGCGAGCTGGCCGACGCCGATTACCGCACGCGCGTGACGATGAGCTTCAAGGCGCTCGA
CGACGGACGCACGCTGGTCGAGATTTCCGAAGAGGGCTGGCGCGAAAATCAGGCGGCGCTCAGCGCTTCCTATGGCAATT
GCCAGGGCTGGGCGCAGATGCTCTGTGCGCTGAAGGCATGGATCGAGCACGGCATCAATTTGCGCGCCGACATGTATAAA
TAG

Upstream 100 bases:

>100_bases
GGGCGAGGCCAGCGCCTTGAAAACCGCATCATATTCGTCGTGAATTGACATGTTATAAAAATATAACATAATGACCGGCG
ACTCAAGCGGAGAATGAGGC

Downstream 100 bases:

>100_bases
CGCGAGCACTCGTCTTTTCTTCGTTCGTTACCAAAAAGCTGTTGCAACGATATGGTTTTGCGACAATTTCCGGCGACATG
CCGGGAACTGGAGACCAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MELKFRVAARIAKPIDEVFEAVADPAKLSAYFTTGGAKGRLETGATVTWDFHDYPGAFPVYVIEVVKDERIVLEWQASEG
EAPNVEGGELADADYRTRVTMSFKALDDGRTLVEISEEGWRENQAALSASYGNCQGWAQMLCALKAWIEHGINLRADMYK

Sequences:

>Translated_160_residues
MELKFRVAARIAKPIDEVFEAVADPAKLSAYFTTGGAKGRLETGATVTWDFHDYPGAFPVYVIEVVKDERIVLEWQASEG
EAPNVEGGELADADYRTRVTMSFKALDDGRTLVEISEEGWRENQAALSASYGNCQGWAQMLCALKAWIEHGINLRADMYK
>Mature_160_residues
MELKFRVAARIAKPIDEVFEAVADPAKLSAYFTTGGAKGRLETGATVTWDFHDYPGAFPVYVIEVVKDERIVLEWQASEG
EAPNVEGGELADADYRTRVTMSFKALDDGRTLVEISEEGWRENQAALSASYGNCQGWAQMLCALKAWIEHGINLRADMYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17782; Mature: 17782

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKFRVAARIAKPIDEVFEAVADPAKLSAYFTTGGAKGRLETGATVTWDFHDYPGAFPV
CCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCEECCCCEEEEECCCCCCCCCE
YVIEVVKDERIVLEWQASEGEAPNVEGGELADADYRTRVTMSFKALDDGRTLVEISEEGW
EEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCC
RENQAALSASYGNCQGWAQMLCALKAWIEHGINLRADMYK
CCCHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MELKFRVAARIAKPIDEVFEAVADPAKLSAYFTTGGAKGRLETGATVTWDFHDYPGAFPV
CCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCEECCCCEEEEECCCCCCCCCE
YVIEVVKDERIVLEWQASEGEAPNVEGGELADADYRTRVTMSFKALDDGRTLVEISEEGW
EEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCC
RENQAALSASYGNCQGWAQMLCALKAWIEHGINLRADMYK
CCCHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA