Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485954

Identifier: 103485954

GI number: 103485954

Start: 472246

End: 473724

Strand: Direct

Name: 103485954

Synonym: Sala_0461

Alternate gene names: NA

Gene position: 472246-473724 (Clockwise)

Preceding gene: 103485952

Following gene: 103485956

Centisome position: 14.12

GC content: 69.71

Gene sequence:

>1479_bases
GTGAAGACCAGCATCGAGATCGGAACCGACGCGGCGGGGCAGGATGTGCGTATCGACGTGCAGGAATTGCTCGCGACGCG
CCTGCTCGTCCAGGGCAATTCGGGGTCGGGCAAGTCGCACCTGTTGCGCCGCATCCTCGAGGAAAGCGCGGCGCTGGTGC
AGCAGATCGTGATCGATCCCGAGGGCGATTTCGTGACGCTCGCCGACGCCTTCAGCCATGTCGTCATCAACGGCGGCGAT
TATGACGAGCGCGAGATTGCGGCGATGGGCGCGCGCATCCGCGAACATCGTGCGTCGATCGTGCTCAGCCTCGAATCGCT
CGACATCGAGGCGCAGATGACCTGCGCCGCGGCGTTTCTCAACGCGCTGTTCGACGCGCCGCGCGAACATTGGTTTCCCG
CGCTGGTGGTGGTCGACGAGGCGCAGATGTTCGCGCCGTCGGCGTCGGGCGATGTGTCCGACACCGTGCGCCGCGCGAGC
CTGTCCGCGATGACCAACCTGATGTGCCGGGGGCGGAAACGGGGGCTGGCGGGCGCGATCGCGACACAGCGGCTGGCGAA
GCTCGCCAAGAATGTCGCCGCCGAGGCGAGCAATTTCCTGATGGGGCGCACCTTCCTCGACATCGACATGGCGCGCGCCG
CCGACCTGCTCGGCATGGAGCGGCGGCAGGCCGAGGCGATCCGCGATCTGGAGCGCGGGCATTTCCTGGGGCTGGGCCCC
GCGATCTCGCGCCGCCCGCTGGCGATCCGCATCGGCGCGACGCGCACGGCGACGCGGATGGGGACGCACAGTCTGATGCC
GCTGCCGGTCGCGGACGGCGCCGACATGCGCTCGATGCTCTTTGCCGAGGAGGAGGCGCCCGCCGCGCCGCGTGCTGTCG
CGGTCGAACCCGAACCCGAACCCGTCGCGGCGGGCGAGCTGCTCGAACGGATCGCGGCGAGCGAACCGCTGCACGCCGAT
GCCGCTGCGCCGCCCGTGCTCGACATCGTCGAAGCGGCGGCGGAGGCCGAGGAGGCCGACGCGGTGGTGATCGCGACTTT
GCAGGCGATGCTGGACGATCCCGACAGCGGCTTCCAGAGCGAGGCGATGCTGTTTCAGGATTTTTCGGTGCGCTGCCGGA
TGGCGAAGCTTCGGAAGGTGCCGCTCGACCTTGCCGCCTTTCGCCGCCGCTTCGCGTTGGCGAAGGGCGGCGTGTTCGAC
CCCTCCGAGCCGCGGTGGCGGGGCGCGCTCGCCGTCGCTGACCGCCTGCCCGACGATATGGTCGCGCCCTTCCTGCAGAT
CGCGCGCGCCGCGATGGAGGGCGCGCCGTGCCCCGACGACGAGGCGCTTGGCCGCGCCTATGGCAGCCGTTCGCCAGGGC
GCATCCGGCGCCTGATCGACTATATGGAAAAACAGGGGGCGATTGTTGTGCGCGCCGACTTCGGCGGGCGGCGGTCGATC
GGGATTCCCGAACTGGGGCTCAGCACCGAGGCGGAATAG

Upstream 100 bases:

>100_bases
TGGGCGGTTCGGGACGAATGGCAAGGCGGGCCGTAAAAATCCGGCCGCCCGCCGCGTCACCCGGTTGTCATCCGCCGGGG
CGCCCGATAGGGCGGCGGCC

Downstream 100 bases:

>100_bases
CGCCGCGTGCCAAATCCGACCTATCCTGCCGCTCGCATCGAGCGACGTCGAGATGCCCCTCGATCCTGTGCCGTTCCGAG
GGGTGTCTCGACTTCGCTCG

Product: ATPase

Products: NA

Alternate protein names: AAA ATPase; ATPase-Like Protein; GMP Reductase

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MKTSIEIGTDAAGQDVRIDVQELLATRLLVQGNSGSGKSHLLRRILEESAALVQQIVIDPEGDFVTLADAFSHVVINGGD
YDEREIAAMGARIREHRASIVLSLESLDIEAQMTCAAAFLNALFDAPREHWFPALVVVDEAQMFAPSASGDVSDTVRRAS
LSAMTNLMCRGRKRGLAGAIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAIRDLERGHFLGLGP
AISRRPLAIRIGATRTATRMGTHSLMPLPVADGADMRSMLFAEEEAPAAPRAVAVEPEPEPVAAGELLERIAASEPLHAD
AAAPPVLDIVEAAAEAEEADAVVIATLQAMLDDPDSGFQSEAMLFQDFSVRCRMAKLRKVPLDLAAFRRRFALAKGGVFD
PSEPRWRGALAVADRLPDDMVAPFLQIARAAMEGAPCPDDEALGRAYGSRSPGRIRRLIDYMEKQGAIVVRADFGGRRSI
GIPELGLSTEAE

Sequences:

>Translated_492_residues
MKTSIEIGTDAAGQDVRIDVQELLATRLLVQGNSGSGKSHLLRRILEESAALVQQIVIDPEGDFVTLADAFSHVVINGGD
YDEREIAAMGARIREHRASIVLSLESLDIEAQMTCAAAFLNALFDAPREHWFPALVVVDEAQMFAPSASGDVSDTVRRAS
LSAMTNLMCRGRKRGLAGAIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAIRDLERGHFLGLGP
AISRRPLAIRIGATRTATRMGTHSLMPLPVADGADMRSMLFAEEEAPAAPRAVAVEPEPEPVAAGELLERIAASEPLHAD
AAAPPVLDIVEAAAEAEEADAVVIATLQAMLDDPDSGFQSEAMLFQDFSVRCRMAKLRKVPLDLAAFRRRFALAKGGVFD
PSEPRWRGALAVADRLPDDMVAPFLQIARAAMEGAPCPDDEALGRAYGSRSPGRIRRLIDYMEKQGAIVVRADFGGRRSI
GIPELGLSTEAE
>Mature_492_residues
MKTSIEIGTDAAGQDVRIDVQELLATRLLVQGNSGSGKSHLLRRILEESAALVQQIVIDPEGDFVTLADAFSHVVINGGD
YDEREIAAMGARIREHRASIVLSLESLDIEAQMTCAAAFLNALFDAPREHWFPALVVVDEAQMFAPSASGDVSDTVRRAS
LSAMTNLMCRGRKRGLAGAIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAIRDLERGHFLGLGP
AISRRPLAIRIGATRTATRMGTHSLMPLPVADGADMRSMLFAEEEAPAAPRAVAVEPEPEPVAAGELLERIAASEPLHAD
AAAPPVLDIVEAAAEAEEADAVVIATLQAMLDDPDSGFQSEAMLFQDFSVRCRMAKLRKVPLDLAAFRRRFALAKGGVFD
PSEPRWRGALAVADRLPDDMVAPFLQIARAAMEGAPCPDDEALGRAYGSRSPGRIRRLIDYMEKQGAIVVRADFGGRRSI
GIPELGLSTEAE

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52923; Mature: 52923

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSIEIGTDAAGQDVRIDVQELLATRLLVQGNSGSGKSHLLRRILEESAALVQQIVIDP
CCCCEECCCCCCCCCEEEEHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC
EGDFVTLADAFSHVVINGGDYDEREIAAMGARIREHRASIVLSLESLDIEAQMTCAAAFL
CCCEEEHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEHHCCCHHHHHHHHHHH
NALFDAPREHWFPALVVVDEAQMFAPSASGDVSDTVRRASLSAMTNLMCRGRKRGLAGAI
HHHHHCCHHHCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAIRDLERGHFLGLGP
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
AISRRPLAIRIGATRTATRMGTHSLMPLPVADGADMRSMLFAEEEAPAAPRAVAVEPEPE
CCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCC
PVAAGELLERIAASEPLHADAAAPPVLDIVEAAAEAEEADAVVIATLQAMLDDPDSGFQS
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHH
EAMLFQDFSVRCRMAKLRKVPLDLAAFRRRFALAKGGVFDPSEPRWRGALAVADRLPDDM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHH
VAPFLQIARAAMEGAPCPDDEALGRAYGSRSPGRIRRLIDYMEKQGAIVVRADFGGRRSI
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
GIPELGLSTEAE
CCCCCCCCCCCC
>Mature Secondary Structure
MKTSIEIGTDAAGQDVRIDVQELLATRLLVQGNSGSGKSHLLRRILEESAALVQQIVIDP
CCCCEECCCCCCCCCEEEEHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC
EGDFVTLADAFSHVVINGGDYDEREIAAMGARIREHRASIVLSLESLDIEAQMTCAAAFL
CCCEEEHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEHHCCCHHHHHHHHHHH
NALFDAPREHWFPALVVVDEAQMFAPSASGDVSDTVRRASLSAMTNLMCRGRKRGLAGAI
HHHHHCCHHHCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAEAIRDLERGHFLGLGP
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
AISRRPLAIRIGATRTATRMGTHSLMPLPVADGADMRSMLFAEEEAPAAPRAVAVEPEPE
CCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCC
PVAAGELLERIAASEPLHADAAAPPVLDIVEAAAEAEEADAVVIATLQAMLDDPDSGFQS
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHH
EAMLFQDFSVRCRMAKLRKVPLDLAAFRRRFALAKGGVFDPSEPRWRGALAVADRLPDDM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHH
VAPFLQIARAAMEGAPCPDDEALGRAYGSRSPGRIRRLIDYMEKQGAIVVRADFGGRRSI
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
GIPELGLSTEAE
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA