Definition Frankia symbiont of Datisca glomerata chromosome, complete genome.
Accession NC_015656
Length 5,323,186
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 16 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1942761..1942772  attL    CGCCGCGGCCGC  N/A  Click
2 complement(1949037..1949927)  PROPHAGE_Escher_MG1655: IS3 transposase B; FsymDg_1654; phage(gi16128284)  4e-54  Click
3 complement(1949924..1950214)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; FsymDg_1655; phage(gi24373865)  4e-13  Click
4 1950357..1951331  PHAGE_Amsact_: putative ATP-binding cassette transporter; FsymDg_1656; phage(gi9964444)  3e-21  Click
5 1951328..1952263  ABC-2 type transporter; FsymDg_1657  N/A  Click
6 1952392..1952733  transposase; FsymDg_1658  N/A  Click
7 1952730..1953812  PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf2; FsymDg_1659; phage(gi26990787)  7e-05  Click
8 1953998..1954762  PROPHAGE_Pseudo_KT2440: transposase, putative; FsymDg_1660; phage(gi26991145)  1e-35  Click
9 1954809..1955987  Rhodopirellula transposase family protein; FsymDg_1661  N/A  Click
10 1956234..1956611  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; FsymDg_1663; phage(gi157166066)  1e-14  Click
11 1957176..1958612  PHAGE_Bordet_1: reverse transcriptase; FsymDg_1664; phage(gi41179367)  2e-07  Click
12 1958821..1959498  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; FsymDg_1665; phage(gi157166067)  6e-58  Click
13 complement(1959599..1961392)  PHAGE_Vibrio_VHML: ORF37; FsymDg_1666; phage(gi27311204)  8e-10  Click
14 complement(1961959..1963224)  RNA-directed DNA polymerase; FsymDg_1667  N/A  Click
15 1964273..1965079  type 11 methyltransferase; FsymDg_1668  N/A  Click
16 1965157..1966407  PHAGE_Lactob_KC5a: putative minor tail protein; FsymDg_1669; phage(gi90592623)  7e-07  Click
17 1966836..1967750  PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; FsymDg_1671; phage(gi17546158)  9e-10  Click
18 1981136..1981147  attR    CGCCGCGGCCGC  N/A  Click
Region 2, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2347161..2347172  attL    GGCGGCGTCGAC  N/A  Click
2 complement(2362118..2363316)  PROPHAGE_Escher_MG1655: IS3 transposase B; FsymDg_1984; phage(gi16128284)  3e-53  Click
3 complement(2363660..2364550)  PROPHAGE_Escher_MG1655: IS3 transposase B; FsymDg_1985; phage(gi16128284)  4e-54  Click
4 complement(2364547..2364837)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; FsymDg_1986; phage(gi24373865)  4e-13  Click
5 complement(2365039..2365458)  putative F420-dependent protein; FsymDg_1987  N/A  Click
6 2365796..2366401  PHAGE_Entero_mEp213: head maturation protease; FsymDg_1988; phage(gi428782594)  8e-11  Click
7 complement(2366390..2366857)  PHAGE_Thermo_THSA_485A: transcriptional regulator, XRE family; FsymDg_1989; phage(gi397912660)  2e-05  Click
8 complement(2367028..2369463)  PHAGE_Strept_SV1: putative regulatory protein, ATPase; FsymDg_1990; phage(gi410491745)  2e-05  Click
9 2370209..2371957  PHAGE_Suid_h_1: transcriptional regulator ICP4; FsymDg_1991; phage(gi51557559)  8e-06  Click
10 2372791..2372802  attR    GGCGGCGTCGAC  N/A  Click