gi|336176139|ref|NC_015656.1| Frankia symbiont of Datisca glomerata chromosome, complete genome. [asmbl_id: NC_015656].5323186, gc%: 70.04% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 1942761..1942772 attL N/A CGCCGCGGCCGC complement(1949037..1949927) PROPHAGE_Escher_MG1655: IS3 transposase B; FsymDg_1654; phage(gi16128284) 4e-54 MIDKFELIAAEKDNYPIRKMCQWLVVSTSGFYDWYQRPVSSRTRRHTTLDTQVRALFAASRQTYGARRIAAALTASGQPTSVRLARRIMRRAGLKACQPRAYRRTTIPGQAPVPTDHVRRDFTATRPGAKLVGDITYVRTGEGWLYLATVIDCYSRKVLGWSMASHMRTELVVDAFTMAASRTTLAPNAVFHSDRGTQYTSDAYHRTLARHGVRPSVGATGVCWDNSAAESFFGTLKNELVYREIYLTRRAARSAIAEYIEVFYNRQRLHSTLGYHTPEHVERLYLTSRTSIPEAA complement(1949924..1950214) PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; FsymDg_1655; phage(gi24373865) 4e-13 MTESRRRFTPEYKDEAVKLVIDSGRPVSAIAKDLGINEGTLGSWVATWRRAHQGEEEPLSMSERARLRELEKENRELRMEREFLSKAAAFFAQRHQ 1950357..1951331 PHAGE_Amsact_: putative ATP-binding cassette transporter; FsymDg_1656; phage(gi9964444) 3e-21 MDNGIHTENLTKKYGAVYGLHGLNLQVSAGSVLGLLGPNGAGKTTTVNILTTLLKPDGGSAWVGAFNVARHPLQVRRRIGVSGQETAVEPLLTGAENLELFGRLHRLSRRHARGRAQELLEMFDLTAAAGRLARTYSGGMRRRLDLAISLIKRPSILFLDEPTTGLDPRSRTATWDLIRELVGSGVTLLLTTQYLEEADQLADLIAVVDQGCLIAEGTVEELKTRTSDDRIEIVLRDHELLPLAATILDRFATSEAVVTRSERRIAVMAPHKPGLLTQVLREMDVAAIELEDVELRRPTLDDVFFTLTGRPMDVKAQHEMATVE 1951328..1952263 ABC-2 type transporter; FsymDg_1657 N/A MKPNTIIDGAAASNGEKQVVAGRHRSTRSHHVTRGWAGPGKPEGIIPVTFLIDVYLLTRRLLMRMPHQPDLIVYSIVQPAIFTLAMIYLFGKAITLPGEADYTDFVIAGLLAQTVVMGAASATSGGIAFELSQKTIDRLRTLPLSRLAILAGCTNAGVIRAFITVFVTTVCGLVAGWRVQAGLGNALLAFLILLLFGLAMSWVGALIGVSVSNPEVAAGAGTVWLFPVMYLSNALTPMSAMPGWLQPVAGWNPLSAVTTACRQLFGNPTASGAENIWPADHPILASVSWSLAIMLATVPLTVWKFVRRTSR 1952392..1952733 transposase; FsymDg_1658 N/A MSDDPPSSPPVPSYDELAALVVSLQADLARALERIAELETQLQKTSRSSAKPPSSDGLAKPPPKSLRTKTGRRPGGQDGHPGSTLRMVAEPDVRLRHEPGRVRGAGRRLRAGR 1952730..1953812 PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf2; FsymDg_1659; phage(gi26990787) 7e-05 MTRSERRQVFDLPELRPHVVEHELVERECGCGARTRAAAPAGVDAPVQYGPRVTAAAVYLYSGQFLSKDRTATALAELVGIPLSAGTVGAMTARAAAGLDGFRDTVRDLLAAADVIGADETGLRVAGKLHWVHCARTDKYTLIDCHPHRGTAGIDALGVLPGFDGVIVHDAWAPYDSYTAATHQLCLAHVLRELQAVVDTAPAGTWCWAAQAADALVALHRLAGDAAATGTPVDKQDLATQTRLLRHAAHIGISQTSPRSTTLMAARHALACRLVDRETDYLRFTRNTRIPADNNGSERDIRMIKLRQKVSGCLRTLTGARQFCAIRSYLSTATKHGIPLFDALVQLAEGRPWMPATSYT 1953998..1954762 PROPHAGE_Pseudo_KT2440: transposase, putative; FsymDg_1660; phage(gi26991145) 1e-35 MELTEDERADLLSLVNGRDVPATVATRARIVLWCAGGLPKKEIASRVGVSRPTVDLWISRYETEGVCGFIDRPRGAPREQVPARIRSRVLALTRTTPPTETGLSHWSSREMARYITRTTGVSVSWHYVAKLWRENGLKPHRQGTFKISKDPAFADKVADIVCLYLNPPAGAVVLCVDEKTQVQALDRTQPLLPISFGTMEKRTHDYVHHGTIKRLEINKTIKICMWDKCFTITENRLPPRRPIPSPPPPEAGMK 1954809..1955987 Rhodopirellula transposase family protein; FsymDg_1661 N/A MFEKILPHLDEGQQRLLAGAVAEMLGNGGITAIAKASGISRTTVQRGALDIRSGMAPSHRVRRDGGGRKPASVAQPGLLEALDALVEPESRGDPMCPLRWTTKSTRKLSEELARQGFQASHTVLRHLLPEMGYSVQAPAKTVEGASHPDRDDQFRYIAGQVAEFQTAGQPVISVDTKKKELVGNYDNGGREWQPTGRLVHVKDHDFPDPDIPKAVPYGIYDLTQDSGWVTVGTSADTAEFALATISRWWDKVGSQAYPHARQLLITADAGGSNSCRSRLRKTELAAFAARTGIEVTVCHFPPGTSKWNKIEHRLFSHISMNWRGRPLESHEVVVNLIGSTTTRTGLQVHAELDEKTDEKGIKISDDEMAIIDRTEHLFHGEWNYTIRPSKSD 1956234..1956611 PHAGE_Entero_4795: putative transposase OrfA protein of IS629; FsymDg_1663; phage(gi157166066) 1e-14 MPAPRKYPDELRERSVRLVLQMRREQPAEASRAISTVAKPLDVHPATLRLWVNQAEVDQGTRPGTTTPDAARIAELEREVRELKRANEILKAASAFFARELCATRRRDNRGGVRDLSRWAVAAAR 1957176..1958612 PHAGE_Bordet_1: reverse transcriptase; FsymDg_1664; phage(gi41179367) 2e-07 MNTDEPESALFRAERRVLEIQTKLHRWAREDARRQFDDLFNLVADPAFLLVAWDRVRGNRGARTAGVDGRTAASIVARIGIPEYLDGLRSALKDRSFRPLPVRERMIPKAGGKLRRLGIATITDRVVQASLKLALEPIFEADFLPCSYGFRPMRRAHDAVAEIRYLTSKPRCYEWIVEGDIKACFDEISHTSLTGRVRARIGDRRVLALVKAFLKSGILVEDRLVRPTTAGTPQGSILSPLLSNVALSVLDEHVARSPGGPGTGKTEKAKRLRHGLPNFKLVRYADDWCLVIKGTKADAEALREEIAGVLSTMGLRLSREKTLITHIDDGLDFLGWRIQRHRKKGMREYYVYSYPAKKSVKAVMAKVKTVCRDVEVNQPLDDLIRRLNPVLRGWCAYFRPGVSSVTFAYLKHYVFETVWRWIRRKHRRSTWKELRHRYCGGGWWPTGQSRELFDPEKVSTTRYRYRGSVIPSPWPAAA 1958821..1959498 PHAGE_Entero_4795: putative transposase OrfB protein of IS629; FsymDg_1665; phage(gi157166067) 6e-58 MLQVAPSTYYAAKKRLPSARSLRDAELLAEIERVWKENYEVYGARKVWRVLNREGITVARCTVERLMRAAGLTGALRGGARPRTTRADPAAARPADLVDRQFTADRPNALWVADFTYVPTWAGMVYVAFVVDVCSRKIVGWRLDTTMRTDLPLDALEMAIWGRKDEPLNGLVHHSDRGSQYTSIRYTDRLVEAGATPSVGSVGDSYEVSQRREFHPPLLSEPGVT complement(1959599..1961392) PHAGE_Vibrio_VHML: ORF37; FsymDg_1666; phage(gi27311204) 8e-10 MRDAATVLEIIRERGRRGLPLERVYRCLFNPDLFLLAYGKLYRNKGALTAGATSETVDGMNLGKIEAIIETLRQERYRWAPVRRTYIEKKNSVKKRPLGLPTWSDKLLQEVLRLILEAYYEPQFSDRSHGFRPGRGCHTALQEIYHQWHGTVWFIEGDVTDCFGSLDHSIMRSILAEKIHDGRFLRLIDGLLQAGYLEDWRYHATLSGCPQGGVVSPVLSNIYLDRLDRFIEQTLLPAHNRGARRTPYRPYMRLWQRAFRLEEAEDREAGLALRKQMKTMPSRDPDDPTYRRLRYCRYADDWLLGFTGPRQEAEEIKTEIGRFLREELALELSPTKTLITYGRTQAARFLGYEIVVLHADHKRDQRGHRSINAAIGLKVPVDVIHAKCAPYLHHGRPIQRTERTVNTDFSIVAQFQAEFRGVAEYYRLAFNRHRLGYLKFVMERSLTKTLARKYRITVPKVYRRYRAVLDTEHGPRRGLQVTVHRDGGRPPLVAQWGGISLARDTTPRPLNDNPPRMWNGRRSELVQRLLAEVCELCGSTEQVEVHHVKALKDLNPKGRKQQPEWVTRMASRRRKTLVVCRACHEDIHAGRPTRRPR complement(1961959..1963224) RNA-directed DNA polymerase; FsymDg_1667 N/A METSTSTEKPFKISKDLVWVAYQKVKANKGAPGVDGQSIDAFEKDLKNNLYRIWNRMSSGSYFPPPVRAVEIPKAHGGGVRVLGVPTVADRVAQTVVAMTLEPRMEQVFHDGSYGYRVGRSALDAVGACRQRCWQRDWVVDLDIQDFFGSCPHDLIVRAVEVNTDQPWVVLYVRRWLTAPVCYPDGSLVTPDRGTPQGSAVSPVLANVFLHYALDLWLAREFPGLPFERYVDDAVVHCATRRQAEQVRTAIGRRLEEVGLRCHPAKTKVVYCKDSGRRGSHEHTSFTFLGYTFRPRRSRNSRTGRNFTSFSPAISRDALTAKGTEVRSWRIHRRTRATLEDLAHTINPIVRGWMNYWGRFNRAELYPLLRRINAYLMKWVRKKYRRLRAYKHARAWWKTVTERGRGLFAHWSWIRDAWMAG 1964273..1965079 type 11 methyltransferase; FsymDg_1668 N/A MGIIPDYRTRIYDRYTTEKLPYLLELTDAEYRRWAAACQHRLRGWLPSDREARCLDVACGHGNFLYLLKEAGYHNIVGIDVSPEQAAVARRVWPDVECANVLDYLPGHAGEFDLITGFDIIEHLHKSEVLTFLDLISKALRPGGSVILQTANAESPWGGMHRYHDFTHETGYDPASLDHLFRVVGLEGFEARECGPYIHGAASMARTAIWKVIHAGLSVWNVAETGSRGSGVYTRIFAGRAQRPAKPAPHHYGTASVESTRLASPTAR 1965157..1966407 PHAGE_Lactob_KC5a: putative minor tail protein; FsymDg_1669; phage(gi90592623) 7e-07 MKVARRAVRQEMSAGPSVLESRNADATLFVAQLFAMMTGVVVARILGPAGRGTVTTLATWAQFLGWIGIFSVDKALIVVGRDLGADREPARLRQLASVAVTTIRPVTAASLVGALGLGGVLFPVLLPLFLVLVVLTILQEFQSGLMLLAGNYQRYLVLRCLQPLIYAVLIAVVAAVPGIIHPHGVVVVVCCIVFSFLTVVLFGPSVPRPWVRLQRAVIGKRLTRLAREIQLATTMQYLNNRLDLLVAPLILARDDVGWYAVGASVGQLLGFLGTANALRGLVGRSAGIDVRGTLVVATIACVGAAFASHAVPLVFGAGFAPAVPVAQVLLLGGIAAFCLQGCTWRLVGATAQRAAAASQGLGAVVFALGVAVEPTMIGLAWANALSTLVALAAGEMLWRRHCRGASLRNQYSEAEG 1966836..1967750 PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; FsymDg_1671; phage(gi17546158) 9e-10 MIRQDAAMPTTRFCALLGIPRRAYTRWQTQARTSGRVKGPWPAPVVDAIEPIAAKYAADWPTWGHRKIYGLMRADGHTASCSSVERTLRRRDLLQPVDYQRERRQLAKARRAAFADPPTGPNQVWQLDFSEYETTTGGTWRLAGVCDYYSKYEYGWHIGPSCTGADVIAAVQIAIAEAERLAGGRPLADQLVDPATDEITRIKLVTDNGAAFKGAAFARFLGSRPELLHIRTRRKSPGQNGVRERAFGSLKYEHLYRHEIETLNDLVREAEAYRQIFKHVRPHEALGLHGRSMSIPIPSSNPQP 1981136..1981147 attR N/A CGCCGCGGCCGC #### region 2 #### 2347161..2347172 attL N/A GGCGGCGTCGAC complement(2362118..2363316) PROPHAGE_Escher_MG1655: IS3 transposase B; FsymDg_1984; phage(gi16128284) 3e-53 MGSARRKFTQEYKSEAVRLVLDSGRSVTEVAKSLGIHETTLGNWVKKAKENGETEERPLSVSERAELEELRKKYAQAQMDIAFLKKSGELLRERAEVKFEFISIHAPKKPVSADGANTFPVDYMCKKLDVSRQGYYAWKKRGPSRREKDDATLSTMIRAVFDRHEGRYGVRRIFHEIRRQGVAVAYKRVQRLMATMGLVSVHPRPRRPVTTVQAADSSSLPDLVGQDFAASAPNQLWYGDITYIRTWDGWVYMASVIDAFSRKIVGWAVADHMRTELVLDALRMAVTRRRPPGGVIFHADRGGQYTSREFVAFCRDNNVRNSVGRTGICFDNAAAESFWATLKKEFVHLHPFDTIDRVRAGIFEYVEIYYNRQRLHSSIGYLTPVEFEEEFDGQTLRAA complement(2363660..2364550) PROPHAGE_Escher_MG1655: IS3 transposase B; FsymDg_1985; phage(gi16128284) 4e-54 MIDKFELIAAEKDNYPIRKMCQWLVVSTSGFYDWYQRPVSSRTRRHTTLDTQVRALFAASRQTYGARRIAAALTASGQPTSVRLARRIMRRAGLKACQPRAYRRTTIPGQAPVPTDHVRRDFTATRPGAKLVGDITYVRTGEGWLYLATVIDCYSRKVLGWSMASHMRTELVVDAFTMAASRTTLAPNAVFHSDRGTQYTSDAYHRTLARHGVRPSVGATGVCWDNSAAESFFGTLKNELVYREIYLTRRAARSAIAEYIEVFYNRQRLHSTLGYHTPEHVERLYLTSRTSIPEAA complement(2364547..2364837) PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; FsymDg_1986; phage(gi24373865) 4e-13 MTESRRRFTPEYKDEAVKLVIDSGRPVSAIAKDLGINEGTLGSWVATWHRAHQGEEEPLSMSERARLRELEKENRELRMEREFLSKAAAFFAQRHQ complement(2365039..2365458) putative F420-dependent protein; FsymDg_1987 N/A MTLLTDAVRAALTAGRLAHLVTLNPDGSPQITLVWVGVDGDEIVTAHLGLYKKLRNLQRDPRVALSIEAAGSESGGLEHYLVVHGHAKVTEGGAPELLEKLTKIYLGPDAPPSPIPNPPPGYVLRITPERVGGIGPWKP 2365796..2366401 PHAGE_Entero_mEp213: head maturation protease; FsymDg_1988; phage(gi428782594) 8e-11 MERPRMQSGNGYQADGPVFDRLLRSRIVFLGSVVEDAVANEICAKLLLLSAEDRERDIQLYINSPGGSVSAGMAIYDTMQYVTNDVVTVALGFAGSMGQFLLCAGAAGKRYALAHAQVMMHQPSGGLGGTASDIAIQLEQTLYTKRTIQERIAFHTGRTVEQIERDSDRDRWFTAREARDYGFVDHVVTAAADLPRPRSTG complement(2366390..2366857) PHAGE_Thermo_THSA_485A: transcriptional regulator, XRE family; FsymDg_1989; phage(gi397912660) 2e-05 MLLLRRLIGVILRRARLRQGRTLREVARTANVSVPYLSEIERGRKEVSSEVLAALCRALDIRLSDLLDEVLDDLRHLESETVPVTVRSAPPDLPGAPPNVTVRTPQCLATGCSGGSPRGRGPRWIARAGGCVPAYARQRPPRSASVPARTARSAR complement(2367028..2369463) PHAGE_Strept_SV1: putative regulatory protein, ATPase; FsymDg_1990; phage(gi410491745) 2e-05 MDGEGAQGITPGDLFDDLPMNRTVTVSVDPHGVVTACGSYAHQPLGYPPAEIVGRPAADLLAAPLPQPARCHLTDGRSWSGTVALRHRDGHGLDVWLHAQPLLAGNGTVAQWFVTAVTVEDLRNHQRELQAELTLVNWAFTQAPLGLAIFDTEVRVCRLNDESAHMIGLREQDARGRPAAEVFPAPGHQPSGLVERARQVVRTGEPAYYEAFLRAPADSHERAWAITLSPVRDPAGQVRGVLSASLDISERYWARQRLTLLNEANAAIGSTLEVTRTAQELADIAVPRLADWASVDLLDTVYHGDEPPPGPITTPVVLRRTAHQSVSAGQPEAVVALGQTDIYPPDSPIAIALASGQSVSYPISDPHVARWVAGSPPRAARIREYGFHSVMIIPLRARGSILGVAVFMRHQHHPEPFTPDDLALADELGARTAICLDNARRYTRERTTALTLQHSLLPHDLPRPAAVDVASRYLPAGAQAGVGGDWYDVIPLSGARVALVVGDVVGHGIHAAATMGRLRTAVRTLADADPTPDELLTRLDDVITRLTTDRDPGSGDLGATCLYAVYDPTTGHATIASAGHPPPALVTPDGTVTYLDIPPGPPLGLGGLPFEATDHHLPDGSLLALYTDGLIESRDRDIDTGLDMLRHALGEPTDSLDTACDVILKTLLPDRPADDDIAVLLARTHTLTTGQVASWDLPSDPAVVAYARTHTTNQLTTWNLPDAIPTTTLVVSELVTNAIRHTTGPIHLRLIRDRGTLICEVSDTSNTAPHLRRARTLDENGRGLFLIAQLTHHWGTRYNRTGKTIWAEQLI 2370209..2371957 PHAGE_Suid_h_1: transcriptional regulator ICP4; FsymDg_1991; phage(gi51557559) 8e-06 MTSVTDVAPAPGRSRRQLTLGAILHGSGGHIAGWRHPSSPPGGQLDLDHHIQLARTLERGTFDALFVADVVAIWGHQYDSLRRTARADHFEPLTLLAALSTVTERIGLVATATTTYNEPFHIARRFASLDHLSAGRAGWNVVTSVVPLEAGNFGRDTHLDHSARYLRAEEFVEVVRKLWDSFDDGSVVRDTASGHYYDPAGLRTPHHAGPHFTVRGPLNISRPPQGHPVIFQAGSSETGLAFAARHGEVVFTAQTTLAGAQAFYADIKARAAAYGRDSDHLLVWPLLAPFVASTRERARARLAELQELVHDDVARRLVQDNIGDLDLSGYPLDGPLPPVGATNRSRSRQELMLDLARRENLTIRQLALRFTTAGAVVGTPEDVADHIEEWFTTRAADGFNVSFPYLPGAAEDFVDHVVPELRRRGLFRHAYETTTLRGHLGLPRPGPAHVRGPTPGMPRTSVPWASGTPRPWAARTSGAARTSGTARVSAAVGASAAVRAAGAPSRGRWARGGGTGQGRRREAGDPWHLTWHPTLPVTPAPPAQPASPSTAAGDGCISTPSSSRRGSSWPPGGTRAPSRTRA 2372791..2372802 attR N/A GGCGGCGTCGAC