Definition Haloferax volcanii DS2 chromosome, complete genome.
Accession NC_013967
Length 2,847,757
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 231452..231465  attL    ATGGGACCGCCCGG  N/A  Click
2 complement(231538..232569)  XerC/D-like integrase; HVO_0258  N/A  Click
3 complement(232566..232742)  hypothetical protein; HVO_0259  N/A  Click
4 233415..233702  PHAGE_Archae_virus: hypothetical protein BJ1_gp20; HVO_0260; phage(gi119757005)  3e-08  Click
5 233714..234040  putative repressor phrH2; HVO_0261  N/A  Click
6 234157..234963  hypothetical protein; HVO_0262  N/A  Click
7 complement(235110..236276)  transposase ISH51; HVO_0263  N/A  Click
8 236618..236932  hypothetical protein; HVO_0264  N/A  Click
9 complement(236934..237194)  hypothetical protein; HVO_0264A  N/A  Click
10 237481..237741  hypothetical protein; HVO_0265  N/A  Click
11 237743..237988  hypothetical protein; HVO_0266  N/A  Click
12 complement(237992..238198)  hypothetical protein; HVO_0267  N/A  Click
13 238338..238736  PHAGE_Haloge_1: VP2; HVO_0268; phage(gi394922867)  3e-50  Click
14 238733..238948  hypothetical protein; HVO_0269  N/A  Click
15 238945..239475  hypothetical protein; HVO_0270  N/A  Click
16 239482..241095  PHAGE_Haloge_1: VP4 precursor; HVO_0271; phage(gi394922869)  7e-126  Click
17 241129..241704  PHAGE_Haloge_1: ORF5; HVO_0272; phage(gi394922870)  2e-24  Click
18 241698..242492  PHAGE_Haloge_1: ORF6; HVO_0273; phage(gi394922871)  4e-73  Click
19 242489..243640  PHAGE_Haloge_1: ORF7; HVO_0274; phage(gi394922872)  7e-112  Click
20 243876..245228  PROPHAGE_Escher_MG1655: IS186 transposase; HVO_0275; phage(gi90111427)  1e-06  Click
21 245331..246683  PROPHAGE_Escher_MG1655: IS186 transposase; HVO_0276; phage(gi90111427)  6e-06  Click
22 247743..247859  hypothetical protein; HVO_0277  N/A  Click
23 248186..249184  PROPHAGE_Shewan_MR-1: IS110 family transposase; HVO_0278; phage(gi24375433)  1e-22  Click
24 252025..252038  attR    ATGGGACCGCCCGG  N/A  Click
Region 2, total : 13 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1294959..1294972  attL    ATGGGCGCTACAGG  N/A  Click
2 complement(1295035..1296081)  XerC/D-like integrase; HVO_1422  N/A  Click
3 1296636..1296893  PHAGE_Archae_virus: hypothetical protein BJ1_gp20; HVO_1423; phage(gi119757005)  2e-12  Click
4 1297044..1298123  hypothetical protein; HVO_1424  N/A  Click
5 complement(1298230..1299027)  hypothetical protein; HVO_1425  N/A  Click
6 complement(1299309..1300286)  PHAGE_Haloru_1: VP8; HVO_1426; phage(gi226596537)  9e-83  Click
7 complement(1300408..1300797)  hypothetical protein; HVO_1427  N/A  Click
8 complement(1300794..1301657)  PHAGE_Haloru_1: hypothetical protein HRPV-1_gp7; HVO_1428; phage(gi226596536)  4e-26  Click
9 complement(1301654..1302247)  PHAGE_Haloru_1: hypothetical protein HRPV-1_gp6; HVO_1429; phage(gi226596535)  3e-10  Click
10 complement(1302282..1302455)  hypothetical protein; HVO_1430  N/A  Click
11 complement(1302457..1303896)  PHAGE_Haloru_1: VP4 precursor; HVO_1431; phage(gi226596533)  1e-90  Click
12 complement(1304083..1304490)  PHAGE_Haloru_1: VP3; HVO_1432; phage(gi226596532)  2e-36  Click
13 complement(1304490..1304843)  PHAGE_Haloru_1: hypothetical protein HRPV-1_gp2; HVO_1433; phage(gi226596531)  2e-12  Click
14 complement(1304945..1306849)  PHAGE_Haloru_1: hypothetical protein HRPV-1_gp1; HVO_1434; phage(gi226596530)  1e-23  Click
15 1307486..1307499  attR    ATGGGCGCTACAGG  N/A  Click