Definition Clostridium botulinum A3 str. Loch Maree, complete genome.
Accession NC_010520
Length 3,992,906
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 57 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2092939..2092951  attL    TATCTAATATATA  N/A  Click
2 complement(2101515..2102645)  PHAGE_Clostr_phi3626: putative integrase; CLK_1309; phage(gi20065985)  2e-11  Click
3 2102715..2102726  attL    AAACTATATATT  N/A  Click
4 complement(2102798..2103802)  general secretion pathway protein; CLK_1310  N/A  Click
5 complement(2103947..2104681)  general secretion pathway protein E; CLK_1311  N/A  Click
6 complement(2105343..2106218)  hypothetical protein; CLK_1312  N/A  Click
7 complement(2106187..2107176)  hypothetical protein; CLK_1313  N/A  Click
8 complement(2107406..2108230)  PHAGE_Clostr_phiCTP1: endolysin; CLK_1314; phage(gi304360691)  3e-48  Click
9 complement(2108270..2108689)  PHAGE_Bacill_WBeta: phage holin; CLK_1315; phage(gi85701395)  4e-26  Click
10 complement(2108770..2108910)  hypothetical protein; CLK_1316  N/A  Click
11 complement(2108912..2109106)  hypothetical protein; CLK_1317  N/A  Click
12 complement(2109126..2111795)  PHAGE_Clostr_phi8074_B1: hypothetical protein; CLK_1318; phage(gi431810375)  1e-119  Click
13 complement(2111797..2113161)  PHAGE_Clostr_phiCD38_2: tail fiber protein; CLK_1319; phage(gi333798127)  3e-15  Click
14 complement(2113177..2114859)  PHAGE_Clostr_phi8074_B1: putative phage tail protein; CLK_1320; phage(gi431810378)  7e-31  Click
15 complement(2114844..2115521)  PHAGE_Clostr_phiCD38_2: tail component protein; CLK_1321; phage(gi333798124)  3e-32  Click
16 complement(2115521..2118190)  PHAGE_Strept_phi3396: putative phage-related tail tape measure protein; CLK_1322; phage(gi126011107)  1e-77  Click
17 complement(2118240..2118392)  hypothetical protein; CLK_1323  N/A  Click
18 complement(2118422..2118907)  hypothetical protein; CLK_1324  N/A  Click
19 complement(2118964..2119557)  PHAGE_Clostr_phiCD38_2: hypothetical protein; CLK_1325; phage(gi333798121)  4e-68  Click
20 complement(2119557..2119901)  PHAGE_Clostr_phiCD38_2: hypothetical protein; CLK_1326; phage(gi333798120)  6e-17  Click
21 complement(2119901..2120410)  PHAGE_Clostr_phiCD38_2: hypothetical protein; CLK_1327; phage(gi333798119)  4e-22  Click
22 complement(2120411..2120845)  PHAGE_Clostr_phiCD38_2: hypothetical protein; CLK_1328; phage(gi333798118)  8e-38  Click
23 complement(2120842..2121186)  PHAGE_Clostr_phiCD38_2: hypothetical protein; CLK_1329; phage(gi333798117)  2e-19  Click
24 complement(2121186..2121596)  PHAGE_Clostr_phiCD38_2: hypothetical protein; CLK_1330; phage(gi333798116)  1e-23  Click
25 complement(2121598..2121858)  hypothetical protein; CLK_1331  N/A  Click
26 complement(2121904..2122875)  PHAGE_Entero_phiFL3A: coat protein; CLK_1332; phage(gi281416261)  2e-53  Click
27 complement(2122895..2123527)  PHAGE_Deep_s_D6E: scaffold protein; CLK_1333; phage(gi423262331)  7e-26  Click
28 complement(2123796..2124404)  hypothetical protein; CLK_1334  N/A  Click
29 complement(2124613..2125335)  PHAGE_Lactob_Lj965: putative minor head protein; CLK_1335; phage(gi41179242)  8e-11  Click
30 complement(2125335..2126603)  PHAGE_Staphy_SpaA1: phage portal protein, SPP1; CLK_1336; phage(gi399498867)  1e-38  Click
31 complement(2126607..2128403)  PHAGE_Pseudo_MP38: hypothetical protein PPMP38_gp28; CLK_1337; phage(gi215479952)  2e-15  Click
32 complement(2128486..2129529)  hypothetical protein; CLK_1338  N/A  Click
33 complement(2129616..2130278)  PHAGE_Clostr_phiCD38_2: recombinase/resolvase; CLK_1339; phage(gi333798162)  4e-09  Click
34 complement(2130525..2130938)  DNA-binding protein; CLK_1340  N/A  Click
35 complement(2131101..2131544)  PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp70; CLK_1341; phage(gi209901307)  2e-15  Click
36 complement(2131832..2134423)  PHAGE_Helico_1961P: DNA primase; CLK_1342; phage(gi422935771)  4e-08  Click
37 complement(2134453..2135037)  PHAGE_Bacill_phi105: hypothetical protein phi105_44; CLK_1343; phage(gi22855037)  8e-31  Click
38 complement(2135085..2135210)  threonyl-tRNA synthetase; CLK_1344  N/A  Click
39 complement(2135239..2135556)  hypothetical protein; CLK_1345  N/A  Click
40 complement(2135616..2135732)  hypothetical protein; CLK_1346  N/A  Click
41 complement(2135788..2135940)  hypothetical protein; CLK_1347  N/A  Click
42 complement(2135970..2136494)  PHAGE_Thermu_phiYS40: sugar-phospahte nucleotidyltransferase; CLK_1348; phage(gi118197649)  8e-32  Click
43 complement(2136561..2136971)  PHAGE_Clostr_phi3626: putative single stranded DNA binding protein; CLK_1349; phage(gi20066002)  2e-30  Click
44 complement(2136975..2137601)  PHAGE_Strept_Dp_1: hypothetical protein; CLK_1350; phage(gi327198335)  3e-26  Click
45 complement(2137615..2138328)  PHAGE_Lister_B054: gp51; CLK_1351; phage(gi157325335)  5e-48  Click
46 complement(2138328..2139248)  PHAGE_Lister_A006: gp42; CLK_1352; phage(gi157325459)  2e-64  Click
47 complement(2139250..2141187)  PHAGE_Lister_B054: gp49; CLK_1353; phage(gi157325333)  5e-109  Click
48 complement(2141190..2141342)  hypothetical protein; CLK_1354  N/A  Click
49 complement(2141351..2141683)  hypothetical protein; CLK_1355  N/A  Click
50 complement(2141733..2142002)  PHAGE_Thermo_THSA_485A: hypothetical protein; CLK_1356; phage(gi397912646)  5e-09  Click
51 complement(2142019..2142189)  hypothetical protein; CLK_1357  N/A  Click
52 complement(2142203..2142496)  hypothetical protein; CLK_1358  N/A  Click
53 complement(2142516..2143274)  PHAGE_Clostr_st: putative antirepressor; CLK_1359; phage(gi80159698)  1e-18  Click
54 complement(2143306..2143518)  putative transcriptional regulator; CLK_1360  N/A  Click
55 2143755..2144357  PHAGE_Clostr_PhiS63: gp26; CLK_1361; phage(gi388570671)  4e-05  Click
56 2144407..2144823  PHAGE_Thermo_THSA_485A: protein of unknown function DUF955; CLK_1362; phage(gi397912661)  5e-09  Click
57 2145382..2146455  PHAGE_Strept_P9: integrase; CLK_1363; phage(gi157311136)  2e-31  Click
58 complement(2146500..2147222)  general secretion pathway protein; CLK_1364  N/A  Click
59 complement(2147371..2147499)  hypothetical protein; CLK_1365  N/A  Click
60 complement(2147595..2148668)  PHAGE_Cotia_SPAn232: kelch-like protein; CLK_1366; phage(gi377830046)  8e-06  Click
61 2153449..2153460  attR    AAACTATATATT  N/A  Click
62 2160502..2160514  attR    TATCTAATATATA  N/A  Click
Region 2, total : 17 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(3293385..3294950)  PHAGE_Ralsto_phiRSA1: bacteriophage tail protein gpT; CLK_2420; phage(gi145708104)  1e-14  Click
2 complement(3295097..3295321)  PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp21; CLK_2421; phage(gi304360683)  2e-05  Click
3 complement(3295299..3295715)  PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp20; CLK_2422; phage(gi304360682)  5e-29  Click
4 complement(3295730..3296617)  PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp18; CLK_2423; phage(gi304360680)  2e-26  Click
5 complement(3296622..3297041)  PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp17; CLK_2424; phage(gi304360679)  9e-10  Click
6 complement(3297047..3297394)  PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp16; CLK_2425; phage(gi304360678)  4e-10  Click
7 complement(3297399..3297764)  hypothetical protein; CLK_2426  N/A  Click
8 complement(3297764..3298048)  PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp14; CLK_2427; phage(gi304360676)  1e-06  Click
9 complement(3298054..3298185)  hypothetical protein; CLK_2428  N/A  Click
10 complement(3298367..3298501)  hypothetical protein; CLK_2429  N/A  Click
11 complement(3298553..3299074)  PHAGE_Clostr_phi3626: Gp43 protein; CLK_2430; phage(gi20066006)  1e-17  Click
12 complement(3299193..3299507)  hypothetical protein; CLK_2431  N/A  Click
13 complement(3299564..3300391)  PHAGE_Bacill_IEBH: DNA replication protein DnaC; CLK_2432; phage(gi197261519)  8e-42  Click
14 complement(3300354..3301259)  PHAGE_Lister_A500: gp45; CLK_2433; phage(gi157325004)  4e-45  Click
15 complement(3301353..3301565)  putative DNA-binding protein; CLK_2434  N/A  Click
16 complement(3301617..3301835)  PHAGE_Staphy_SpaA1: transcriptional regulator, pbsX; CLK_2435; phage(gi399498897)  3e-07  Click
17 3302027..3302437  PHAGE_Clostr_CD119: RepR; putative repressor; CLK_2436; phage(gi90592681)  8e-15  Click