gi|170758191|ref|NC_010520.1| Clostridium botulinum A3 str. Loch Maree, complete genome. [asmbl_id: NC_010520].3992906, gc%: 28.31% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 2092939..2092951 attL N/A TATCTAATATATA complement(2101515..2102645) PHAGE_Clostr_phi3626: putative integrase; CLK_1309; phage(gi20065985) 2e-11 MEVVKVKTEDGKERYFVADDLGLPIEPILKFIRFKDNTNYARNTLRMYCQHLKLYFEYMQQRNLNFQDVTIDDLALFVNWLQNPYESLKVIPSVHVESARSPRTINIIINTVLAFYDYILRHEEYSNNISDRLKRFVSIPSRNFKGFLYGIAYEQKKVTSNILKLKVPKSKPKILNKEEIEMLVRACNNLRDKFLLSLLYETGMRIGEALSLWIEDFDISDMIIDLKDRGQLENNAEIKTVSSPRRIDISQNLADMFMEYIAEYHTEEVETNHIFIKISGNNKYKAMNYIDVDNLFRTLKKKTEIYVTPHMFRHSSLTVLRMAGWQPELLRIRAGHKNIYTTMNTYIHPSDEEITKEFEKTRPNLDLDIYNKGEDN 2102715..2102726 attL N/A AAACTATATATT complement(2102798..2103802) general secretion pathway protein; CLK_1310 N/A MDLFYYKAKDIKGNVLKGACNEKEKVNIYKELREKGYFLLNITNKNVFKIRSEKITLKDCSILCNKLYMLMASGINITDAINIAYEDFHNVHVKNSLYTIRNNILRGDSIYNSFKGFSNIYPKFLLSMIYIGEESGRIQYVLSDLKNFYENKYKFNKEIKNALIYPIMVLITFIIMLYILIHMVVPSLIGIFNELGGSIPKKTLGMITAIKVFNVILGILFISIIFILLGSNFFYKRYKIKYAVDNLKIKTPILGQIYKNIFICNFSNSMNLMIKSGIPINKSLKLLEEVTDNYIFKENIKNLNKNIKDGKSISISLNKCGFSNKILLSMVHKI complement(2103947..2104681) general secretion pathway protein E; CLK_1311 N/A MLKKPNGLILVTGPTGSGKSTTLYSMLQYVNNKEKNIITIEEPVEYTIAGINQVNVDYKRELTFLKGLKSILRQDPDIIMVGEIRDEETAKVAVRASITGHLVLSTLHTNGALESIIRLLDMKIEPYILSDALRGIVSQRLVKVICPYCKKAYIPSMEEKNFVNLKEEFLLYKGKGCYKCNNTGYMGRSVIYEYINIDKEKKDLIKNIVKNNNEENFLENSLKENVNKALIQGRTSFREIQRII complement(2105343..2106218) hypothetical protein; CLK_1312 N/A MKPAKKEILYSIIRYSPDILKGEIINVGLLFHNLKETKVKYFLLDEKSPKIKCIMDNISQVDLYRSYKEILEYYLEKSKDDMSGVVGNTHIGSYFQEDFIKKMYSKFEKKEMFLSMPNVAYTSNEDKLFETILKRYVGNNHTNTKKANTLTAKKYLKKIFAENEVLNKRVKSDLKVKPIKNLDDLEVKIDFTFKNGMWNYMQTIPRIDTKSKNTEWFSQTQLLLDARFEDTKIHLIYKESDILDDEGTYNLLRYLQNQYCNLEIHNIDKESSVKKLCNYIETEGEILEKIG complement(2106187..2107176) hypothetical protein; CLK_1313 N/A MKEIEIETFLKPMGEGVTRPALVIGNDYNEYILKNEDVDEDGKLVKYNCMFVNELLAFQIGKFLDVPMPEAVIALIDSTLIEGDPTIRFAYRFKAGKYFGTEKLKQIENNYIDNYRELANMNKPYISKSWNKFFKNIENKKDIPKILAFDLLIANFDRYINTGNILVNREKKDMRNIYAIDHGHAFFGPIWNEYKIDCLGIKQITEEYVAWYCTIILNEIRRSGPFGSGTIFGVLENYVNLEDVQNHSFSDIIIKMRSINENIIREWCNNIPNDWYIDKEMQVIYYTNFLMKQKDTVEQIIQMLANNNAFTNYRGGILRYETCEERNLI complement(2107406..2108230) PHAGE_Clostr_phiCTP1: endolysin; CLK_1314; phage(gi304360691) 3e-48 MKGVDISNNNQRPIDFNKIKASGVEIVYLKATEGTTFKDPYCNEYYNRAKAAGLKVGLYHFLVGTSAPESQAENFYSMHKGKTLEVLSNLDIERNNFNVMDYAIRFIKRFKELSGRNISIYAGPYFINDNLDSRLKQYPLWVAHYGVNKPMANKVWGSSYAGHQFTEHGTIPGIPGICDVNNFNTSILEENKKEEKKVKNLVVYNNIADARAAEYLADKLNCPTIWGARSFDYSVVENVIGVGGKKEQYTSYLKTLISGNNRYYTMQAVLNYNK complement(2108270..2108689) PHAGE_Bacill_WBeta: phage holin; CLK_1315; phage(gi85701395) 4e-26 MKWDKILSTIVAGLGACANYFFGGLDMALKTLLLLMVLDYITGLICAGRDKTLSSSAGFKGLAKKIIILIIVGVGVSVDNATGANGIVRSMVIFFYASMEGISILENATKAGVPVPEKLKEMLVQLREGNKKEIKEQSK complement(2108770..2108910) hypothetical protein; CLK_1316 N/A MSNGFNFWEMCFNFGAVGEDMLKRAVDLDDLTKEEYKTITGQEYLQ complement(2108912..2109106) hypothetical protein; CLK_1317 N/A MGVVINHSVINKIQEEGKNNLAKNMLLKELASLRLENKEKDLIAKNLMQQLAEIRLNLIEKEGN complement(2109126..2111795) PHAGE_Clostr_phi8074_B1: hypothetical protein; CLK_1318; phage(gi431810375) 1e-119 MEYIGIEKFGSFLDNGAAYTIPDRPWFTDNYPGSLSERGKGNIRAIADRHEISLGNTLSNENSQIPWIHLKDGLKHIYVCKQVLATNISWDYLNERNMIYGTPVTIDGKQYKLRVLTGGVERNPDKPGMVPTDNEWDTIIQNTANITGLPKPTTEDLTEANTYGQLDGKHNQHWNWWGINTICQETRTLTSSKITRGYSSAASFTSYDAIALNSACGWRPVLEYIETDPPEKPTIVKPTGTETKPSVTNVQPIQIETIFNNPDGTFKHMDYEVWDLDLNKRVANTRVFITNDVLTPKLELGHRYKLIVSHTNTADQVSPQATSYFMRGILNKYKLSEPVTQKQYDKLTAYTSGDDLIMKPQQFPETENSVIRLVPQTMNNLTAGETTTKELPYSASTKALVIGDRLIKNKEVYTVAEVKQGNKPINVNSTIYKILNKDKPMISWTYRSGTKSYTYNGYAYVSYLDLPYFQITGIPLQGGETKYIWTGTTENLRNMVTTGKGNMMYTIKSTEKETNLIATNLDTGLAKQTLLPRDNDQIALSAVVDSRTNRLVLSAKERCKVTEGSSTTYKYTLMCYWFDVSDLDNIKMVQKSTILANCGYTELGNPTIEDMQDIYKGNICIYYPRVTEDKCELKEHRYDLTSLEGVSTLGIVSDVTDALDTEIVAKHIKDKQGESILVVSMKYPSLASSGNIRTLTMKKGGTLYSNTLSSGTAAVRTHKITYSHEQGIGLVYATSVGNIYKRFTKDYTEWGNIEFVFSVTPRAGLEQVFETVDYYPESYGKYPGLAILEYTEATKTDKLVLRADYTNDKEQASKIILDKPITAQAGEKIKYLDYDLEVKAGEETATIKPTDITEDYYEYDAQFTKEEAQRDINIKGRNTKLTTLYYYNY complement(2111797..2113161) PHAGE_Clostr_phiCD38_2: tail fiber protein; CLK_1319; phage(gi333798127) 3e-15 MDKPFNLLIDTKRTGFNAVRGLKQGDNNSVLNIILVQNSVPFDLTGLTVRINYKRPDNKLFLQMVDIENATEGKIKINILTKVLENAGEVKADLSLFDKDNRKITSATFSMFVDSSVYRNDYLEPEDLDLIQSIWVEEDKRIKQENTRKLNEENRVSNESIREKNEKDRTDKEHLRELVEDQRQDNEAGREKSEATRIENEKTRLENENQRKENEENRIAKESERVDAEEERKANESARQQGYTEIKNTIDDFSVCEEYDPKKEYKKFNRVVYNGSCCECLKDCTNIYPVNKEYWICIATKGKDGLGSGNMHTDDYDKNQNGIVDKAESITDGFITYNVTDINNKLNTLNANDKNAREEIMDIKLKLKEKLAVDFINKSGIGFFDTFETNDYIESTTAKWNKTDTTVDFGSQESEQLVYQAVDNSNEIQLVGDQLSVGDKIKVGYKIITIEEVL complement(2113177..2114859) PHAGE_Clostr_phi8074_B1: putative phage tail protein; CLK_1320; phage(gi431810378) 7e-31 MEVLVVITLYNELETNFEHNGVGILKDCLKCETHRDLSGLFSLELEYPIHSKMANKIEKFMIIKAPTPTGLQLFRIQERERDLGTIKINATHIFFDLVRNFIADTNIIGKTRIQAVQQVLDKTLTPHKFIVEGDYGGKQNNCRIVRYNPVKALLGDEDNTIRNRWGLELDFDNYKIIAKEKIGKETGVLIAYKKNMLGITEKLDMSEVATRIVPQGAEGLLLPEYYIDSPNIGAYYQPLIAHVKFDEIKVKEQPTEGEEPTEDDEGFETKEEAHAEMRKQVNRLFTETKIDIPYFNYEVEFEELGKTEEYKQFKSLENINIGDTVTVRHGELGLDLKGRIIAYDYNCLLKKYIKIELGMSKKDLTLTIKQAMAEIQFTKEKIEMEVSNLDKSLSSKLEITEKHIMTEVKDVNKSLNSKIEQTAETITFTVNNQISNVNSKIEQQADKINLVVDGGGSIKAAQIALAIANDSSSINMLADTINLIPNNGVINFSNGTSIDTRDSSGQNRDNFIRLRADKYHYVCVDANDGAISLFFPGGGGSHAYWTFKKDGLYKDGVKVL complement(2114844..2115521) PHAGE_Clostr_phiCD38_2: tail component protein; CLK_1321; phage(gi333798124) 3e-32 METGFIWKGTHSNEKGLKIISLPNITTPEKREEKIIIPGRDGYLTQSDGGYEGEVKPVEFDIKHDNFDEIKTWLNGSGEVIFSNEPDRYYKARIINKLDLARVLEKFHSGIIQFDCQPFGYLQKEVMQIITPTTIYNQTNKDSEPYIRVYGSGTITLNINDEVIKFTNVENYIEIDSELMECYKNNTPLNNHMYGEFPIFQIGENKISWTGNVSKIEITPRWRCS complement(2115521..2118190) PHAGE_Strept_phi3396: putative phage-related tail tape measure protein; CLK_1322; phage(gi126011107) 1e-77 MADGRIIIDTQIDNKGAEKGINELNGIANKGLKGIGIAIAGVGTAMGTMGGFALKTGVDFESAFTGVKKTVDGTDQQFTQLEKAIRNMAKSMPESASEIAGVAEAAGQLGIKVENIEGFTKSMVMLGDSTNMSSEEAATALARLANITQMPQTQFDRLGSVIVALGNNLATTESEITAMGLRLAGAGHQVGMSEAQIMSFAGALSSVGIEAEAGGSAFSKVMVDMQLAVEKGGEGLNQFAKVAGMSSSEFQKAFKEDAAGAIIAFIQGLGKCQESGQSAIGVLDDMGITEVRMRDALLRAAGAGNIFTDALELGTKAWEENTALANEANQRYDTTESKMKMIKNSVVDLGIAMFDKFREPFRESLDTVMESLSNLSDSLANGSLGESVDRLAEGFGNFISRVAEGVENWLPKIINALAWIMDNASFIASGIAGIGAALLTLKIASIVGTIAEKFKLLYLEIATGTPIMEAFNIVLGLNPIILITAAVIGFIAALVILWNTNEGFRNAVIGAWNAISGAAQAVWGAIVDFFTVDIPAAWQSLLDFFSGVPGWFADLWATIQQAFVDGWNTIVNFFTQTIPQWIDSVGKWFNELPHLIGYALGYALGTIVKWGIDTWNYLSTNVPIWINNVVNFFATLPGRIWTWLVNTINRIVNWGQQTYTNMVNAATRAINATIQWFSQLPGRIWTWLVNTISRVAQFAVNLANTARTAGANMVTNIISAVANLPSQFVNIGKNIVQGVWNGITGMAGWIRDRVNGFFSGIVDGAKDALGIHSPSRVFRDQVGKYMAQGVGVGFENETENIKKSMQKDLSNLTAKMKTTVDFETSKTSRAMTAGVNKTINNTNETVTNNDNGLTLKVDKFINNTKQDIKDIAEELEFYRKRNSLATGGV complement(2118240..2118392) hypothetical protein; CLK_1323 N/A MINIEEVRCPNCNQMLLKADYIKGEIKCIRCKKIIELEINQRTEPNHTIE complement(2118422..2118907) hypothetical protein; CLK_1324 N/A MGLFSRKNKEISPINLTYIDGIDRYIKNTAVSLNLDDKKECLVIKASKNNYPVVNINFDKLVAIDIIHEKDIIETNKSSVGRAMVGGVLLGSLGAVIGGISGVGTKKSSKLRTFLVINYKSKDEEIKVISFEIENITLNMPKFINKLRENISSDNIEEIYL complement(2118964..2119557) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLK_1325; phage(gi333798121) 4e-68 MNMLIDLVPNTIEIEGKNYNINSDFRTSILFELLMQDNSISEEDKLIQALQLYYPVIPPNINLAVDKMLWFYRCGKDITPSKGTGKGKSTQIYLFNFDDDYIYSAFLDQYGIDLQDIEYLHWWKFKAMFKALKEDNEIVKIMGYRSMDLSKIKDKEEKNYYRRMQELYKIPIAKDEKDKLEEINNILLNGGDVGNLL complement(2119557..2119901) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLK_1326; phage(gi333798120) 6e-17 MKINGTELKDLDILDLEVAENYEKAIKGIEGISEKVQGMTVAESIRAQCNAIFKIFNDLFGEGTDKKVFGNKVNLLTCLKAFDELVTQVNAPNEEIEKIANKYSPNRAQRRKKK complement(2119901..2120410) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLK_1327; phage(gi333798119) 4e-22 MAVRKRKIQANYLEVAGAFELLGTGFTELNESPSAQTTSKRYINQSSASQSITGYEWATEFTADQIASEKAIEHIRNIGEMQLTGTDTETDYLIVDLDKPADTTGFRARKFKVAISIDSFPDNDGELGIEGSFLGISDPTLGTFDTSTKKFVEGFTPKTEGTTIVEEGK complement(2120411..2120845) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLK_1328; phage(gi333798118) 8e-38 MIIDSLRNYIRKCPYLYTFNNAIRVNVNYLEPSADTYSIEEIPIEPIIKKYVNGDSVRQYAFIFTSREPYGADVLQNIDNSGFYEKFADWIEQNNNNDILPVLENNLEPLEIKVTSTGYAFAVTEDTAQFQIQLKLKYFKKGMI complement(2120842..2121186) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLK_1329; phage(gi333798117) 2e-19 MATTVRIQIDKTEKILLKRYLNKNGQAQIKFTQEVAKECNNYVPFLTGRLKDMSVELKIDKLIYNAPYAAKQYYTNKGGNRGALRGKYWDKRMWSDKGDRIVQTIADFVGGRRK complement(2121186..2121596) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLK_1330; phage(gi333798116) 1e-23 MGVLFKNADITIYNKWYDSINDIDKYQRTVIKGVNWQGKRNGTVSDKGLLLADSTLIFVDKLDNYVSPKKFLKLYNEEKSNYFTFAPGDKIVKGEVEFEITGIKPYRIGDLESEFDDVIDIKSVNILTDHMEVEGV complement(2121598..2121858) hypothetical protein; CLK_1331 N/A MTTEQRKAVLVIRNYLNKDLKDNYILENYDLAVEQLINNAAKLENIKTPGVKSMSEGNQSISFDSNPWSITEDIKALLPTPYVRMW complement(2121904..2122875) PHAGE_Entero_phiFL3A: coat protein; CLK_1332; phage(gi281416261) 2e-53 MTITKLGDMIIPSNFAAYTAEQAVAKNKFFKGGIIASNPQLASLLEVGGKTINMPFVKPLTGDSEVPSETNDMGIGNISTSEDIARRQLRVKAWGENQLASLLSGDNVMDRISDAVSDYWSAELSKILISTCTGVFAKLTNKVNDITVKTGNAALLNPNDAIDTKYIIGDSADAITAIAIHSAVYAYMLKMDQITNVPTSDGKGVIQKYGPLNATVLVDDSVPYDSTTKVGAMYLYGPGAFGFVESNNGIEAAEITRNPLKGLGENILISRKQFVLHPLGVQWNEPTSSITSPANSDLETATRWTKVKEDKNIYLAQFKFKIA complement(2122895..2123527) PHAGE_Deep_s_D6E: scaffold protein; CLK_1333; phage(gi423262331) 7e-26 MLKKDLLELIKDIEDDKDIDEILATKFGGLEVFKQKINTDKDFKSYMDSEKDRHYNKALDTWKANNLQSLIDEKIKELYPEDDPKDLELKKLQQEMENMKKEKIKEQLTNKALKIATEKGLPSQLVDYFIGQDEETTNKNLETLEKVFTEKLETTVKERLKDNSYTPPSGGGGGDINPYAKESFSLTRQAELEKNDPEKAKTLRDLANKI complement(2123796..2124404) hypothetical protein; CLK_1334 N/A MKFKMKPVAILFMALLLSISVPLTAFASTSTGNSLVNVVVSDSDTKTIIAQVPKEHVAEYKEKLKNPDFKQEQINMMNGSTRTLPARALPEGKIITQKYLDRSDVKRAYEAVQPGAFESIIVDLGAGAALGQIMKALNASNAWTLTATVVAWAVEYIRVKPQDWWTQSYIMLFENRISCVRMSHIENLKPTYPAAWLILERL complement(2124613..2125335) PHAGE_Lactob_Lj965: putative minor head protein; CLK_1335; phage(gi41179242) 8e-11 MTREEEFSQGLYDEANEQLKEVYKEQKQNRDELLREIALIMLTYTIIDGLMSLKSKNKRNEYKSLSKLITTATQGQKATQTRVINNILGNTVKNTFDFYSYNANLKDVKKIIENNFKGKHFSTRVWDNEQKVAKHLHKQVKNFLDGKINVNQIKKDIEKTYNNNAYEARRLVETEVNRCCSNVFDRFCKETGVKKVRYNATLDKRLCSDCAQYHDKVFDFDKKIETPRHPLCRCFYIVEE complement(2125335..2126603) PHAGE_Staphy_SpaA1: phage portal protein, SPP1; CLK_1336; phage(gi399498867) 1e-38 MIKIDINLLKKAYEEYQNNLQSYAKMYVYYKGNTDAMANYKMVTERSNNKTPVNYIKKFIKEEVSYSVGNDVNYISKSGNENIVNDIDYYLDHWSEGHDSNLAKNMLIYSLAYELYYVDKEGQFCSKVIPPTQGYAAIDDFGNISFFMHSYKLKFDDTTYIDVYTDKEILHFNDKFEKINKPTKHIFGAVPVGLAKLSEEGKDDTLFKDLKGLQDAYETNLSDISNEISDFRNAYMVLTGVSINEDDIPAMKKLGVMQIKDKNGTAAWLIKNINDTFIQNTLNTLEDKMYQLSSHINHNEKMQSNLSSLALRARLIALEEKCKLNQKSIADCIKTRLKFLFIYLKVIKNIEYDFRDIKIKFTPNIPQDDLMTAQVISQLGDKLSTETGLSLLSFIENPKNEIKKLKDENPIDLDNVDFGADE complement(2126607..2128403) PHAGE_Pseudo_MP38: hypothetical protein PPMP38_gp28; CLK_1337; phage(gi215479952) 2e-15 MIYFDNLEFDIQIKYEVYLLNKYLIKHYDSETSKALLMANNNNLDKLARALGEIDIEFFCLYFMSDIFVVKGLSEDNTIPNDHKPNVARQLSKGHYELWNIANDIFVKDKYDKVAIIEPRGFAKTTIFDMAVSVWLHCYEKSLFTLLGAKTDSDATQFLDSIKKVFNDNKKIIKCFGKLINIKVIKSNGERYTVNSNEVEFTNGTYIKTVGSGTSVRGNNWGGIRPTVFIGDDFQDEKNILTDAAREKQYSKWTKEIEEVGDKAVFRNGKKIKSATKIIAIGTVLHIDCLMSKLSRNNDYFTILRRAIILGPGQTVEDIFESTLWQQCHDIYFDEKLNKDERKAKAKQFYEDHKSEMQFPVWWPEKWDCFNDLAVKYWEDRKAFMSELMNDASSIGEKWFKFVGTQTKAEIGNHDFTKTMLCVDPASTTNKKSDFTAAIVGSKATNDFTYIRDLIMKKLSFEQYCKEVVEMLERNLDVTHINIEKNTYQGADVVKIKELIEKSPILKDKQYEWINEMQRKNKDEKISTVVDPINNGQIIICSDCEDSKAAIKQIKDFQGQLYTIHDDMIDCISELEIKIKTIETIGEVTILDRRKFGL complement(2128486..2129529) hypothetical protein; CLK_1338 N/A MKSNELQKDLIKIIVDDFGAKLTKPEFNQYVTKLRDYFIKYIIEERKYTGKVLDLFKFDLGKTDIINSVIYYVVENENVKSKSAIDDFLIALNMLFEEVINDKYFNQNLNNLQPFSKLSSEIARKIEKDRIKDLKEKETRPAISNEEYIIIVEYLNNMILNSLKAHEVKIIIKLLLLYGFSFDRIIELKTKDYCSEKGTLSIVYGNITNRLNFILELPYELNKLMKSYLEIRNKRYPNAENLFVTTEGTTITHGFLTYTLDNIKKEYDLQKSKSHDNKNTFTNTGLAKYAVIQMILEGMNQSIILDLTGFKEEQFSYCQDYVNELKNLNRNRYVNHIIRGISTYDDI complement(2129616..2130278) PHAGE_Clostr_phiCD38_2: recombinase/resolvase; CLK_1339; phage(gi333798162) 4e-09 MLYFAYHRTSTEDQHLDRGLKEINEFIANHNIELVGEIYTDQCTGKNFDRPQYKDLMKAMDLASQINPNEKISLVVTELDRLGRNKQLTLKEIRKMQDNGIRLMVLEIPTTLIELPKDSSIATMIMETINNMLIEMYASFAQAELEKKEKRQREGIAAKKARGEWEDYGRPRALEFDKFSKEYKRVLDGSIKPVECMKLLGITKPTYYRYRKEYEENKLV complement(2130525..2130938) DNA-binding protein; CLK_1340 N/A MDNKELSQQQLKAIELLLKGTSINDIATITGVSRQTISTWKNKNEVFKAELDKSLQALKSEVNNKILLNIEPLVDKLVRIALKSNSDKTSLDAIIYAINRLCGTPTNKTQDMTSDKDNDKEINIDALLSEIKEDNNN complement(2131101..2131544) PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp70; CLK_1341; phage(gi209901307) 2e-15 MEENKFKKTEYHLYNYKDIDILNQLADIKIKKLKNDINIKAIEYEERTSKTNKFNSEVENEVIRREEYIQIELELLQQEKENRINEKELINKVMELLEYDEKKLVELRYFSKPTKSWTSIAQELNQSVDNCIKVRRKIISRISELLF complement(2131832..2134423) PHAGE_Helico_1961P: DNA primase; CLK_1342; phage(gi422935771) 4e-08 MELQDIDLKELIENETGERFNRQGYIKCPFHSEKTPSLRVKFNPDTNKDFFKCFGCSECGDAIDFIIKYKNLNYTEAREYLGIEVEKTEKELQEEKVKDYVDWELSKFRQGQKLLGIFKFVNERDEIVYFKAKFANGEGKKQLSYYHLEGEKVIAKRGTSELPYNLYNALSAIKNDDVLIIDEGEKDSNTINSIFKNKGYVATSLKGCKELNILKNNRMRIYIIGDTGQAGEQYKWNIYKEFKKYAIEFKFINLPGLKNLGDNKDVTDWIEVGHNKKDLLDAFDRSLDIKNKYELQQDTGGIYKIMFKEKADEVIETKKYITDFRLLKATRIKFIDDETEGVRIVLKSVTGDTIERIGISTVFDDVKSFKNFLGTMDLVFSGRVEDLNRLKGWINKYFALENEEVYGGVKFIERDEELIFVENNGSITSKGVSENIKSDGRNNADVLKNEPITTEELKEIVKHIFKFAGPEKSISIIGTVINNLAVYQCQALKQKLHHLLIVGESGSGKSTILENVIAPILNYPKKDIKSIGLISNFALMKNLSDGNYPALFDEFKPSMMDRYKIGNISETLRNLYDRATISKGNKSLKTTDFNLYRPIILAGEESYPNQEKALIERSCIIYLSRRERTQKNTEAMEWLIKNEELLNKLGRSLIEIVLELDVDGYRRLRCNCNSKIKGLNNRILNTAINESCGIRILNLLLEKHGLKQLVDFDDYITQNIKVEVLEDTENVRSLVERMLILYNDMINDSRAIGWEDVVKSRGDGLFIKTSELINQIREHVIRVGADLVPLNCNDFKKQAKKAGYLVKASGKVIKVDGKSIKFDIYDKEMLQALKVDSIAPPDYEEVDGEDTKIFPFKQVTQKI complement(2134453..2135037) PHAGE_Bacill_phi105: hypothetical protein phi105_44; CLK_1343; phage(gi22855037) 8e-31 MYYKFTDTEIKKLLKENFMILYDTREQKNQHILNYFDEKKVKYKKKKIDEGDYTAIITKCPEMGIYRDIYFPVAVERKNSVDELAGNLAEKTDTHDDIRLIRELQRSKNKGIKMYLIIEDKNGMENIKKGNYRSLYTPKAFLGRLSSVQDLYLHDTIFTNNKDTGFEIYRKLYYSIRNYLKELSTDIGPAVENE complement(2135085..2135210) threonyl-tRNA synthetase; CLK_1344 N/A MAKCLKCGTIYCVYGGSEDSECPKCKSKDIDTSKEKRLFKK complement(2135239..2135556) hypothetical protein; CLK_1345 N/A MKTLYKWAITTKPLKIKKEIIKNVKEKRDGSIMDKGDYCTYGFKENLGKYKINTLYNNPSKIDWIQYISLKDDFDLEKVKEILLQEIEKCKKELQLKEDQIKELK complement(2135616..2135732) hypothetical protein; CLK_1346 N/A MRDLIKDIPSFLLGASMVGFPVGYIVGGYLSKKFYKKR complement(2135788..2135940) hypothetical protein; CLK_1347 N/A MICWDCGKEIDNTLAVYDQFSCDICERTLCKECYLEHLGFCEECLSDREE complement(2135970..2136494) PHAGE_Thermu_phiYS40: sugar-phospahte nucleotidyltransferase; CLK_1348; phage(gi118197649) 8e-32 MKMDKVAGSKNDEFYTPVYAIEPILKYIKPNSIVWCPFDEERSLFVKRLRKEGHTVIATHINIGINFFDCDTPECDYIISNPPYSCKGEVLQRLFNIGKPFAMLVGVVGLFESQKRFNMFKNNDFEILYMNKRVAYFKDYSEQKPSLNPPFSSVYLCKGILPKQIVFEEINKAS complement(2136561..2136971) PHAGE_Clostr_phi3626: putative single stranded DNA binding protein; CLK_1349; phage(gi20066002) 2e-30 MNKIQLVGRLTKDPELTFAPGTGTAVTKFTLAVNRPQFDKSKQQEADFIPCVCFGKRAEAIANYVQKGHRFGLSGRLQINKYVDKEGNNRWSTDVVVEDFEFLQDKGARINESQSNESSVDYEKDLTPVDDGDIPF complement(2136975..2137601) PHAGE_Strept_Dp_1: hypothetical protein; CLK_1350; phage(gi327198335) 3e-26 MKDIFEVKERIINLLSSVERKGIDRVIKYLEESDFFIAPASTRFHGNYQGGLAEHSLNVYELFKEKNKRFDFGLSEDTMKIVALLHDTCKINFYTVYDKNVNIAAAGEKPKWIKMPAYGVNDLLPIGHGEKSVIILQQLMPLTKDEVLMIRWHMGGYEPRENLNNVSAAWNICNAAVALNTADLESSYILEEHFEPGEDKKQMKIKGV complement(2137615..2138328) PHAGE_Lister_B054: gp51; CLK_1351; phage(gi157325335) 5e-48 MIKVLATGSKGNCYIIQAGEEKLLLECGIDWRNILKGLNYSIKGVKGCLISHKHSDHCKSFKRAFESLPKVCAPLEVLEKYNCKEYHKTFLMKHLDKVRLGEFTVMAFKAEHTNSDATECECLGYLIQHSQIGKILFATDTYYLRYKFKNVDHILIECNYSERYMEDLESYETRTFKSHMSLETLKETLKTWDLSNTKTITLVHLSENNGNPEEFKKEIESLTGIPTYVAVPGLEIS complement(2138328..2139248) PHAGE_Lister_A006: gp42; CLK_1352; phage(gi157325459) 2e-64 MGQLAKVENVKSILESSKGIQIKERLNEILGKKTPGFVSSMINVSNSPTLKECEPMTVISSAVVAATLDLPIDPNIGFAYVVPYNCKDKKTGKWIKKAQFQLGYRGYVQLALRTSQYKNINVVEVYRGQLASWNPLTEELQFDFDNKESDEVIGYAGFFKLTNGFEKVVYWKKEDVLNHAKKYSKTFSSGPWKDDFDSMAKKTVLKDMIKKWGILSIEMQTGIKADQAVIKEGIVNKDSGLDENIDYVDNPQNAKDVDFEEIKKEIKEEGNKESIDIERHEPQKDEASVVEAEIIGPENNEEEAPY complement(2139250..2141187) PHAGE_Lister_B054: gp49; CLK_1353; phage(gi157325333) 5e-109 MVNSIFLKNLSLKNFKGIKDLTIDFGKVTNIFGENGTGKTTIQDSFTFLLFDKDSKDSTKFDVQPLDENNNPIHNLETVIKATLDIDGKEVVLKRVYKEKYNKVRGTAKTEFKGYESKYYVNEVPKKVTEYKNFISGLLDEKLFKLITNPSYFPSLPWKDRRSIITEIVGDLDNKVVLDFKKDLEPLKMYLKDKSLNDFVKANRSKINQLKKDRMQIPSRIDEVNNSIQEFDFDGLDIQRRGVAAGIKNIDEQLLDKSKADEGLFKLKTALLEKRQELTETEYKFKANANKPKMEIEAKIRSAEINIRHLNMNINEFEKEVKRNQEYIDNTLVLKRNNLLEIYNNIKNSKFEFNEENCICPTCKRKFETNDIEAKREKLEGNFNSNKAKKLKENIAEGKSTAAKIEELKSKNESLSKKIEDEENMLAATKKSLETLQGKLNSFKTEIEDPEKIKYIKQEIYSLESQIQSYKKEDTTELNNKKEELQEQLSKLDKQLTFKETNEKAKSRIQELEEEETKLSEKIAELEGLEILSEEFIRTKVELLEEKVNSKFKYVKFKMFKNQINGGLEETCEPCINGVPYSSNLNSAAKINAGLDIINTLCNHYNINAPIFIDNRESTNKIIDVDSQVINLIVSKDKKMKVEVI complement(2141190..2141342) hypothetical protein; CLK_1354 N/A MKSNNQYIKLHERDILTLKIINKQLQKRINNNNAKIEQLRKYNRELKGRN complement(2141351..2141683) hypothetical protein; CLK_1355 N/A MKQAITGYITALINMYSDGNVEEKFVQQLNDLLDYVADLKEENREDITRVVLNNNIEITKLQEYIKELEESCENNNEVTRQQWEKIVRLNNANRIWQNTCNLLIVKLESM complement(2141733..2142002) PHAGE_Thermo_THSA_485A: hypothetical protein; CLK_1356; phage(gi397912646) 5e-09 MNENWCTLAIAVLYERTCTIEQAFELYNQGRIFKNRKKSDEDLADMVKLREFLSLKEIAEIYGSSESTVCQLINKFKKKKIAPCQEPNN complement(2142019..2142189) hypothetical protein; CLK_1357 N/A MLKRLLAERGVILTKELSDIVIADIKFNKIRFNKCTSLDYLLSIAERSASILKRCA complement(2142203..2142496) hypothetical protein; CLK_1358 N/A MDNKLLTQKDLSERWQVSIKAIESYRQQGIITPVEGLPSIRFNPRHIAELEGTKLERFSPLERRRMERELEQLKQENEKLKGILSATLANLAPVINL complement(2142516..2143274) PHAGE_Clostr_st: putative antirepressor; CLK_1359; phage(gi80159698) 1e-18 MSKITTFEGQEVRVKTDKGVTLINLVCTAKACGLTRIANSGNEVVRWTSKGITEKLNLIRATDVERKYSEEIQYILDEIENTDDRNTIYMSSWLSKRLALECHSEKAMRYKNFLVTLDEARKQGQLQPVSQGTILQLAQGMQMIGQVVQDIQTAMTNIETYVKDSIQSKDLQIEKTMNLIGFRSINTKRLSDKLKEQLSEHLGVAVNASSNVYRRTKGKIFKEFKVVKWEDIPVSKYNAVHAFIEEVVCKNI complement(2143306..2143518) putative transcriptional regulator; CLK_1360 N/A MTELVGNLSWNKKIEVLRIIKGWTQKEAAEKCNTNQKVYWIWESGGSYPRKNSRLAIAKAFGIKEEEIFN 2143755..2144357 PHAGE_Clostr_PhiS63: gp26; CLK_1361; phage(gi388570671) 4e-05 MPLSKEEIGILIKKARELKAEKIGKKFTQNDLAESLGKSRSYIGDIENGRTYPNYRLLAEIAKVCEVPLSFFDESNNLLLSIINKFFPDMNIEKQEDFAKYISSTLSSSTTEMVDWDINIWREAFEDYNNALIAEEARSYSEVENYEFKTPEAAMQFILKQPAIMGYGGFDTSKMSDQDIIEFANELLNLMKMLGPKYNK 2144407..2144823 PHAGE_Thermo_THSA_485A: protein of unknown function DUF955; CLK_1362; phage(gi397912661) 5e-09 MKTEEIIQLAQDIKNQYGGNPIKICIALGIKINYINLKPNIYPAYTLKISEKPIINLNSHFTTNSQKVLCAHELGHVLMHDDKLLNQFGDEHNGIEEYEANLFAVALLFDQDDLNIDMSNMDNYLLKELLDVNIKLKV 2145382..2146455 PHAGE_Strept_P9: integrase; CLK_1363; phage(gi157311136) 2e-31 MDYNITYRKKDKGIQVIISYKVNGKWKQKSKQGFKKKNDAKRAADKLLDDLKCNIENSLNTDYGNITFKDFTIMFLEHEILYKEPGTIRSYRFALNRFKELNDLELTKINTMQIQTCVDNMIKTGLASSTTKLYVSKLNTIFSNAIKPYNLIAKNPVDGIKILKSKKQEKIKALDKAKLKDLLGKITYKKYYIASLIAATCGLRIGEVLGLTWADIDEINSTLTVNKQWKKLKSGNWGFGSVKSKNSNRVVPISPNTLKELKNFKKNFVTDIHNRIIVCADSINLSRGLRDCYKRNGYNISIHDLRHTYATMLIGNGVDFKTAAKLLGHTIEMTMKTYAHVNDDMINKATNLIEKIF complement(2146500..2147222) general secretion pathway protein; CLK_1364 N/A MNFSMNYLDLKETVQNSEELRGGKQCENIDFSTLKIESSLLKLLPEHICRKYNILPLKIIDEQLYIVSSNYLKEDALYKISFITGKNIKIVLCNKEDILGAIKRFYTNYEGKYKVKGINEEKTISYEENKEKNLEGPIIKLTDSIIEEAIWRKASDIHIEPFKDFALIRFRIDGILIEFKKIPKKIYTSICTRIKIMSYMNIAEKNIPQDGKIQNNYRENNDFRVSTLPTVYGEKLVEVA complement(2147371..2147499) hypothetical protein; CLK_1365 N/A MVRRKRTFDEISNLAKIDNTESIIGILGVISDVYLYFLVKRL complement(2147595..2148668) PHAGE_Cotia_SPAn232: kelch-like protein; CLK_1366; phage(gi377830046) 8e-06 MFKKGFKNIGYFIIVFLVIGLVGCKSHRISEGEKVDIPKFTEVITLKREKDSLGIYNIENGDISKTMETKDVVDVKYNNKNSAYVFINIIEKGKELNKNKITIIKNGKQTILENFYSASDIDISKEGNKIAYRSFKQDSLQSAEGMKIYDLENKKEIKIKSDVLVSGNLFKWLNEDEILYYGINSEKENKAKIYKYNVKENKEEVYVDNIEGICTYFMPNGDNVLLLSSQGDKFNLSYYNKKDNSFKKISEEVNQIYKGTKSIKNMYFLGKNDLENKDYLYKIDGNTLNLTKLTYDFPPKIDINGGIVSDKNGNIYFSGYEDLKEQPLNEIYVYKEKDDTVEIISDKENSYHIMGER 2153449..2153460 attR N/A AAACTATATATT 2160502..2160514 attR N/A TATCTAATATATA #### region 2 #### complement(3293385..3294950) PHAGE_Ralsto_phiRSA1: bacteriophage tail protein gpT; CLK_2420; phage(gi145708104) 1e-14 MGVNVGEAVAYLKLDTSEFKKALNGAGKDLEIFVHKVEEEKTKIEKLQEALTKKAETFSNIGKSMEKPSAAAQNFLKTGMKNTLDEEAKSKNPKKGPANIAKNNYDKIQKDIQASIKKVQDSFEQLQASVVTQLIPIFNDKLVPILNNKLIPAFTKIANKAIELMNSFNKLPNPVKNAIAIMIVSIAGIAKTFTVLGNLITSINKVISTFKKLKDAGGIFSILKTIITSKTLLILLAIAAIGLIVYEVIKHWDKLKAYFIKFWDGTKKVFHNFWSWLQEFFKKWGPIILAILAPFLGIPLLIIQNWDRIKSAFSAILVHITNVGKKIGKFFEESAQGWKMLGEDIVGYVKKLGHRIIDGFVNGIEKRVKRVKDAATNLANTVKSGFKNPLKIHSPSRVFDEYGRFIGEGLIHGIDNQENAINNKFKGMADKIKGLGNVRPNFNGLNNMSLSGAYGGTYASPYGPNNMNKSMGLTQDIKMYVTIPNADKEGANKIANEFKQMTESSMKNVMTGLFMNDVLRD complement(3295097..3295321) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp21; CLK_2421; phage(gi304360683) 2e-05 MSVISISKQYKQRPSEIIGLTNDYEAFCFDEACVYILNEMSKEDAREPKFIDGYKTNKTNNEDVIQWLNTNNKN complement(3295299..3295715) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp20; CLK_2422; phage(gi304360682) 5e-29 MDLKVTNIEDLKKVAQGEVIQLPQFGQGIPFNARVKRVSLLNLVRKGILPNKLLGAAEELFYGKQNSKENVDLVQMTNVMYIMAENALIEPSIEELKNVGLELTDEQIVALFNYTQEGVNELDSFREESEDNERNINK complement(3295730..3296617) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp18; CLK_2423; phage(gi304360680) 2e-26 MTNGKTLVNVVKVNFIDEVTNTKHTIETSNEIDIEPINSKGKRDILRIKNKIYGINETDDIVIGYKLKMKDNLFNIETMALIDGGTIQDNKYCGTEVGIAVERHPFTMEIFTEEKDYSRTTGYVKFVYKHCKGKPAKYKIQDGKFLVSSYEAESIPFRNEKPVEIEFINKLEENDNGEKPGEPTPIEDIGVEGGKVENNNPDVGVSITNRVVWNFSNQINQDDVNLENFIIKRKSDNSRVNGNVTIDDTKKIVTFVPDSLAIDTVYIAEAKEINKLDGSGKTTALSTEFKTIKIR complement(3296622..3297041) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp17; CLK_2424; phage(gi304360679) 9e-10 MSKFNYKVPGDCIQQDIINNTIPETLWQKVYLYLKKLGYNVYAPGQKRNKCTESYVVIKENGVHAVVGNISGYKLFDIIVYSPMDQYSTMEFYVENLKEALKKIEDLRPTGNETPSIIDYDVQAYTTSIEYQQFKSLRR complement(3297047..3297394) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp16; CLK_2425; phage(gi304360678) 4e-10 MSEFEVNIDSIIDGLSEFETQSKAAISGYADIAGKKLEEDAKKNAPWKDQSGMDIETIKGGKQWKGDKCNIYISGNKDYYSSLELCNDKKYAILKPTIDKLSPQILKGMSNLFGK complement(3297399..3297764) hypothetical protein; CLK_2426 N/A MNNINRAKISKNIYEQLEKRDLLREIKILRIGKNAFEEKLDEVYVCTIKGYYYKNNSNIITTSIEGLEVNNLYNDKLLISYNDANSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNRV complement(3297764..3298048) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp14; CLK_2427; phage(gi304360676) 1e-06 MITPLEILKFNLQEKQYPYFEDKELELLLEINNNDVERASYKGCILKAIADDGIEVAGIKLQSNRVYWLTLAEYFREEQKILRNQTSMERVDEH complement(3298054..3298185) hypothetical protein; CLK_2428 N/A MIYYNEDDLRLYNKLNKQMIKLFFKNIYRKISNLREIKFNWGR complement(3298367..3298501) hypothetical protein; CLK_2429 N/A MKYNSIIKIAEFLLYKTTAKYSLIISKYYETKFKFTAFKNKLIN complement(3298553..3299074) PHAGE_Clostr_phi3626: Gp43 protein; CLK_2430; phage(gi20066006) 1e-17 MLDKKLYIKTEERLYRYFRSKKELSKLKNRVNHLSNRIEIIMDKIKNNDVTLEEESRSRTYDEIVQTSSNGTSYAERELIRQIERLEIELGEKIKKKGKVEYKIREIEEEISVMEDNISSLNEENKKFIELKYGENKSVDWIAVEMFGRARSTAYRKKNELVEHVAQLNNLIG complement(3299193..3299507) hypothetical protein; CLK_2431 N/A MSTVLVKEIENKVFEEIESFREENVVLKILLKEYVKKSIDYEKLLKESINLLDKYQEELEFLRVGKNSWTDEVVKHYFTIKDLQKALDIVGKEIMIYELNKNNK complement(3299564..3300391) PHAGE_Bacill_IEBH: DNA replication protein DnaC; CLK_2432; phage(gi197261519) 8e-42 MEKTLKSKELDYNIAGENEKVEICSVCGEAIEKITYIPGLNRYIKGPVMCKCKREALMAKEKEKINKEKQLRLKRIIKNSLIDEKFRNSKFKNWDFTKGNDKMYKIANKYTKKFENMKKESVGLLLYGSPGNGKTYTVACIANFLIEKMLPVICVNADSLLNRIKDTYKKSGKEVEEDVLRGLDNADLLIIDDLGTEQDTEWTRTKIYNILDSRYRNGLPLIITTNLSLIELKNRYEKRTYYRILEMCTPILNDGKNIREEKAKEKTQILKELLK complement(3300354..3301259) PHAGE_Lister_A500: gp45; CLK_2433; phage(gi157325004) 4e-45 MDKKESGDMLAEVKWIKITTNMFDDEKIKLIDAMPERDTVHYIWIRLLVQAGKTNANGYIFLNDNVPYTEEMLSTIFNRPLNSLRFALKVLKDFGMIQIQEDKLIRITNWSKHQNIEGMEKVRQQTRERVAKHRAKKKELLEETKRHGCKNNDNRKSIMLHETLSNGRDIDIEDIDIEIKEDRKSDIRKNLDKINEAYFNTFYRQISATYLNQVLKVMAKEDYTDLLIYALDITKKREQEQGKIKGFKYTMSILESWINKGYKLPQDVKKNEISKKWREGEVYETSRRSFGEDLKKQGIGL complement(3301353..3301565) putative DNA-binding protein; CLK_2434 N/A MAVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKTLKITPNELIDQELWRWW complement(3301617..3301835) PHAGE_Staphy_SpaA1: transcriptional regulator, pbsX; CLK_2435; phage(gi399498897) 3e-07 MTTAKKLKAYRCLRGAKQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTIDELFFKKIVNFRNT 3302027..3302437 PHAGE_Clostr_CD119: RepR; putative repressor; CLK_2436; phage(gi90592681) 8e-15 MAEIKDRLKYERLRKDLNQTELAKILNVSKQTVSNWENGNRIPDTLTLSKLADFFNCSVDYILGRSENRNGIISKANIDGSNYEFELDKSIFPNGITREQMINYIKELEERNKELEKEAEISRKLKEAGFDFNPDK