| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 28 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2310015..2310788) | PHAGE_Clostr_phi8074_B1: endolysin CS74L; CLD_2469; phage(gi431810380) | 4e-30 | Click |
| 2 | complement(2310832..2311026) | hypothetical protein; CLD_2468 | N/A | Click |
| 3 | complement(2311043..2311297) | PHAGE_Clostr_phiSM101: hypothetical protein; CLD_2467; phage(gi110804030) | 2e-13 | Click |
| 4 | 2311464..2311931 | hypothetical protein; CLD_2466 | N/A | Click |
| 5 | complement(2312068..2312190) | hypothetical protein; CLD_2465 | N/A | Click |
| 6 | complement(2312183..2312548) | hypothetical protein; CLD_2464 | N/A | Click |
| 7 | complement(2312561..2314366) | PHAGE_Clostr_phiCD6356: truncated putative phage structural protein; CLD_2463; phage(gi326536865) | 5e-62 | Click |
| 8 | complement(2314373..2315530) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLD_2462; phage(gi326536864) | 5e-47 | Click |
| 9 | complement(2315726..2316589) | PHAGE_Clostr_phiCD6356: putative phage tail protein; CLD_2461; phage(gi326536863) | 3e-46 | Click |
| 10 | complement(2316579..2319194) | PHAGE_Staphy_phi13: tail length tape measure protein; CLD_2460; phage(gi29028708) | 5e-101 | Click |
| 11 | complement(2319245..2319406) | hypothetical protein; CLD_2459 | N/A | Click |
| 12 | complement(2319439..2319933) | hypothetical protein; CLD_2458 | N/A | Click |
| 13 | complement(2319980..2320573) | PHAGE_Clostr_phiCD38_2: hypothetical protein; CLD_2457; phage(gi333798121) | 2e-66 | Click |
| 14 | complement(2320573..2320917) | PHAGE_Clostr_phiCD38_2: hypothetical protein; CLD_2456; phage(gi333798120) | 3e-16 | Click |
| 15 | 2320981..2321187 | hypothetical protein; CLD_2455 | N/A | Click |
| 16 | complement(2321204..2321428) | hypothetical protein; CLD_2454 | N/A | Click |
| 17 | complement(2321432..2321926) | PHAGE_Clostr_phiCD38_2: hypothetical protein; CLD_2453; phage(gi333798119) | 3e-21 | Click |
| 18 | complement(2321927..2322361) | PHAGE_Clostr_phiCD38_2: hypothetical protein; CLD_2452; phage(gi333798118) | 2e-37 | Click |
| 19 | complement(2322358..2322702) | PHAGE_Clostr_phiCD38_2: hypothetical protein; CLD_2451; phage(gi333798117) | 7e-19 | Click |
| 20 | complement(2322702..2323112) | PHAGE_Clostr_phiCD38_2: hypothetical protein; CLD_2450; phage(gi333798116) | 1e-24 | Click |
| 21 | complement(2323114..2323380) | hypothetical protein; CLD_2449 | N/A | Click |
| 22 | complement(2323370..2323555) | PHAGE_Staphy_phiMR11: putative rho terminator factor; CLD_2448; phage(gi162290153) | 9e-05 | Click |
| 23 | complement(2323605..2324552) | PHAGE_Entero_phiFL3A: coat protein; CLD_2447; phage(gi281416261) | 4e-103 | Click |
| 24 | complement(2324576..2325214) | PHAGE_Deep_s_D6E: scaffold protein; CLD_2446; phage(gi423262331) | 3e-25 | Click |
| 25 | complement(2325483..2326076) | hypothetical protein; CLD_2445 | N/A | Click |
| 26 | complement(2326285..2327007) | PHAGE_Strept_1: minor head protein; CLD_2444; phage(gi39653715) | 8e-11 | Click |
| 27 | complement(2327007..2328284) | PHAGE_Staphy_SpaA1: phage portal protein, SPP1; CLD_2443; phage(gi399498867) | 1e-38 | Click |
| 28 | complement(2328288..2330021) | PHAGE_Rhodob_RcapMu: large terminase; CLD_2442; phage(gi356870870) | 4e-16 | Click |
Region 2, total : 22 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2332318..2332332 | attL TATTATATAAAGAAA | N/A | Click |
| 2 | complement(2334618..2336303) | PHAGE_Bacill_SPBc2: modification methylase; CLD_2435; phage(gi9630267) | 1e-58 | Click |
| 3 | complement(2336408..2338102) | PHAGE_Lister_P35: gp33; CLD_2434; phage(gi157325398) | 3e-52 | Click |
| 4 | complement(2338113..2338271) | hypothetical protein; CLD_2433 | N/A | Click |
| 5 | complement(2338324..2338782) | hypothetical protein; CLD_2432 | N/A | Click |
| 6 | complement(2338785..2339066) | hypothetical protein; CLD_2431 | N/A | Click |
| 7 | complement(2339066..2340772) | PHAGE_Strept_PH15: putative NTP-binding protein; CLD_2430; phage(gi190151434) | 1e-16 | Click |
| 8 | complement(2340784..2340957) | hypothetical protein; CLD_2429 | N/A | Click |
| 9 | complement(2340963..2341766) | PHAGE_Clostr_st: hypothetical protein CST053; CLD_2428; phage(gi80159739) | 6e-49 | Click |
| 10 | complement(2341759..2342088) | hypothetical protein; CLD_2427 | N/A | Click |
| 11 | complement(2342093..2342389) | PHAGE_Thermo_THSA_485A: VRR-NUC domain-containing protein; CLD_2426; phage(gi397912645) | 1e-14 | Click |
| 12 | complement(2342389..2343216) | PHAGE_Lactob_Lj928: putative replication protein; CLD_2425; phage(gi41179303) | 8e-16 | Click |
| 13 | complement(2343209..2343655) | hypothetical protein; CLD_2424 | N/A | Click |
| 14 | complement(2343659..2344756) | PHAGE_Thermo_THSA_485A: SNF2-related protein; CLD_2423; phage(gi397912655) | 3e-31 | Click |
| 15 | complement(2344916..2345086) | hypothetical protein; CLD_2421 | N/A | Click |
| 16 | complement(2345101..2345394) | hypothetical protein; CLD_2420 | N/A | Click |
| 17 | complement(2345414..2346163) | PHAGE_Clostr_st: putative antirepressor; CLD_2419; phage(gi80159698) | 3e-19 | Click |
| 18 | complement(2346180..2346509) | hypothetical protein; CLD_2418 | N/A | Click |
| 19 | complement(2346532..2346756) | hypothetical protein; CLD_2417 | N/A | Click |
| 20 | 2346978..2347427 | PHAGE_Lister_B054: gp41; CLD_2416; phage(gi157325325) | 3e-13 | Click |
| 21 | 2347477..2347893 | PHAGE_Thermo_THSA_485A: protein of unknown function DUF955; CLD_2415; phage(gi397912661) | 4e-09 | Click |
| 22 | 2348078..2348092 | attR TATTATATAAAGAAA | N/A | Click |
| 23 | 2348234..2348347 | hypothetical protein; CLD_2414 | N/A | Click |
| 24 | 2348452..2349516 | PHAGE_Strept_PH15: putative integrase; CLD_2413; phage(gi190151416) | 4e-38 | Click |
Region 3, total : 49 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2676741..2676752 | attL ATAAATTATTTA | N/A | Click |
| 2 | complement(2679631..2681271) | PHAGE_Clostr_phiCD6356: truncated putative phage structural protein; CLD_2071; phage(gi326536865) | 6e-81 | Click |
| 3 | complement(2681278..2682156) | PHAGE_Clostr_phiCD6356: hypothetical protein; CLD_2070; phage(gi326536864) | 5e-98 | Click |
| 4 | complement(2682349..2683215) | PHAGE_Clostr_phiCD6356: putative phage tail protein; CLD_2069; phage(gi326536863) | 9e-113 | Click |
| 5 | complement(2683232..2688592) | PHAGE_Clostr_phiSM101: phage tail tape measure protein, TP901 family, core region domain protein; CLD_2068; phage(gi110804068) | 0.0 | Click |
| 6 | complement(2688854..2689180) | hypothetical protein; CLD_2067 | N/A | Click |
| 7 | complement(2689216..2689797) | PHAGE_Bacill_WBeta: putative major tail protein; CLD_2066; phage(gi85701389) | 4e-22 | Click |
| 8 | complement(2689800..2690144) | PHAGE_Bacill_WBeta: conserved structural protein; CLD_2065; phage(gi85701388) | 6e-09 | Click |
| 9 | complement(2690141..2690530) | PHAGE_Bacill_WBeta: conserved phage protein; CLD_2064; phage(gi85701387) | 2e-16 | Click |
| 10 | complement(2690523..2690849) | PHAGE_Geobac_E2: putative head-tail adaptor; CLD_2063; phage(gi148747735) | 7e-11 | Click |
| 11 | complement(2690830..2691156) | PHAGE_Clostr_phi3626: Gp7 protein; CLD_2062; phage(gi20065970) | 5e-15 | Click |
| 12 | complement(2691369..2692496) | PHAGE_Staphy_phi7401PVL: phage major capsid protein; CLD_2061; phage(gi448244667) | 8e-89 | Click |
| 13 | complement(2692489..2693247) | PHAGE_Lactob_JCL1032: putative ClpP protease; CLD_2060; phage(gi418489116) | 2e-60 | Click |
| 14 | complement(2693237..2694421) | PHAGE_Staphy_phi7401PVL: portal protein; CLD_2059; phage(gi448244665) | 1e-72 | Click |
| 15 | complement(2694437..2696137) | PHAGE_Bacill_WBeta: putative phage terminase large subunit; CLD_2058; phage(gi85701381) | 2e-153 | Click |
| 16 | complement(2696134..2696598) | PHAGE_Bacill_WBeta: putative phage terminase small subunit; CLD_2057; phage(gi85701380) | 4e-25 | Click |
| 17 | complement(2696870..2697106) | hypothetical protein; CLD_2056 | N/A | Click |
| 18 | complement(2697197..2697670) | PHAGE_Bacill_WBeta: putative phage endonuclease; CLD_2055; phage(gi85701432) | 4e-12 | Click |
| 19 | complement(2697670..2698092) | putative non-transporter ABC protein; CLD_2054 | N/A | Click |
| 20 | complement(2698137..2698439) | PHAGE_Bacill_WBeta: conserved phage protein; CLD_2053; phage(gi85701429) | 2e-06 | Click |
| 21 | complement(2698600..2699145) | PHAGE_Clostr_phiCD6356: putative site-specific recombinase; CLD_2052; phage(gi326536904) | 3e-53 | Click |
| 22 | complement(2699142..2699357) | hypothetical protein; CLD_2051 | N/A | Click |
| 23 | 2699537..2699548 | attL CTCTTATATTTT | N/A | Click |
| 24 | complement(2699540..2699968) | hypothetical protein; CLD_2050 | N/A | Click |
| 25 | complement(2699952..2700122) | hypothetical protein; CLD_2049 | N/A | Click |
| 26 | complement(2700124..2700414) | hypothetical protein; CLD_2048 | N/A | Click |
| 27 | complement(2700571..2701566) | PHAGE_Thermu_26: phage XerD-like integrase; CLD_2047; phage(gi157265417) | 5e-21 | Click |
| 28 | complement(2701708..2701839) | hypothetical protein; CLD_2046 | N/A | Click |
| 29 | 2701850..2701863 | attL CTTTTTTATATTAT | N/A | Click |
| 30 | complement(2701931..2702980) | PHAGE_Clostr_phiMMP02: hypothetical protein; CLD_2045; phage(gi414090433) | 2e-44 | Click |
| 31 | complement(2703007..2703210) | hypothetical protein; CLD_2044 | N/A | Click |
| 32 | complement(2703224..2703418) | hypothetical protein; CLD_2043 | N/A | Click |
| 33 | complement(2703456..2703641) | hypothetical protein; CLD_2042 | N/A | Click |
| 34 | complement(2703679..2704002) | hypothetical protein; CLD_2041 | N/A | Click |
| 35 | complement(2704036..2704197) | hypothetical protein; CLD_2040 | N/A | Click |
| 36 | complement(2704247..2704543) | hypothetical protein; CLD_2039 | N/A | Click |
| 37 | complement(2704584..2705336) | hypothetical protein; CLD_2038 | N/A | Click |
| 38 | complement(2705368..2705556) | hypothetical protein; CLD_2037 | N/A | Click |
| 39 | complement(2705582..2705881) | hypothetical protein; CLD_2036 | N/A | Click |
| 40 | complement(2705894..2706202) | hypothetical protein; CLD_2035 | N/A | Click |
| 41 | complement(2706225..2706938) | PHAGE_Bacill_1: hypothetical protein BV1_gp03; CLD_2034; phage(gi155042921) | 2e-29 | Click |
| 42 | complement(2706928..2707794) | PHAGE_Strept_PH10: hypothetical protein PH10_gp11; CLD_2033; phage(gi238821328) | 2e-41 | Click |
| 43 | complement(2707832..2708104) | PHAGE_Thermo_THSA_485A: hypothetical protein; CLD_2032; phage(gi397912646) | 6e-06 | Click |
| 44 | complement(2708121..2708303) | hypothetical protein; CLD_2031 | N/A | Click |
| 45 | complement(2708305..2708565) | hypothetical protein; CLD_2030 | N/A | Click |
| 46 | complement(2708577..2709377) | PHAGE_Bacill_WBeta: putative antirepressor; CLD_2029; phage(gi85701411) | 1e-24 | Click |
| 47 | complement(2709477..2709593) | hypothetical protein; CLD_2028 | N/A | Click |
| 48 | complement(2709631..2709753) | hypothetical protein; CLD_2027 | N/A | Click |
| 49 | complement(2709731..2709934) | putative DNA-binding protein; CLD_2026 | N/A | Click |
| 50 | 2710140..2710505 | PHAGE_Clostr_PhiS63: gp26; CLD_2025; phage(gi388570671) | 2e-06 | Click |
| 51 | 2710517..2712031 | PHAGE_Bacill_SPBc2: site-specific recombinase; CLD_2024; phage(gi9630126) | 2e-55 | Click |
| 52 | complement(2712037..2712471) | PHAGE_Bacill_WBeta: putative RNA polymerase sigma subunit; CLD_2023; phage(gi85701416) | 2e-07 | Click |
| 53 | 2712598..2712611 | attR CTTTTTTATATTAT | N/A | Click |
| 54 | 2713482..2713493 | attR CTCTTATATTTT | N/A | Click |
| 55 | 2716412..2716423 | attR ATAAATTATTTA | N/A | Click |
Region 4, total : 16 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(3281503..3282525) | PHAGE_Ralsto_phiRSA1: bacteriophage tail protein gpT; CLD_1512; phage(gi145708104) | 3e-14 | Click |
| 2 | complement(3282543..3283067) | phage-like membrane protein; CLD_1511 | N/A | Click |
| 3 | complement(3283252..3283476) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp21; CLD_1510; phage(gi304360683) | 7e-05 | Click |
| 4 | complement(3283454..3283870) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp20; CLD_1509; phage(gi304360682) | 2e-29 | Click |
| 5 | complement(3283885..3284772) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp18; CLD_1508; phage(gi304360680) | 8e-27 | Click |
| 6 | complement(3284777..3285196) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp17; CLD_1507; phage(gi304360679) | 7e-09 | Click |
| 7 | complement(3285202..3285549) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp16; CLD_1506; phage(gi304360678) | 7e-10 | Click |
| 8 | complement(3285554..3285919) | hypothetical protein; CLD_1505 | N/A | Click |
| 9 | complement(3285919..3286203) | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp14; CLD_1504; phage(gi304360676) | 3e-07 | Click |
| 10 | complement(3286708..3287229) | PHAGE_Clostr_phi3626: Gp43 protein; CLD_1503; phage(gi20066006) | 9e-17 | Click |
| 11 | complement(3287342..3287662) | hypothetical protein; CLD_1502 | N/A | Click |
| 12 | complement(3287719..3288519) | PHAGE_Bacill_IEBH: DNA replication protein DnaC; CLD_1501; phage(gi197261519) | 8e-42 | Click |
| 13 | complement(3288509..3289414) | PHAGE_Lister_A500: gp45; CLD_1500; phage(gi157325004) | 2e-45 | Click |
| 14 | complement(3289508..3289720) | putative DNA-binding protein; CLD_1499 | N/A | Click |
| 15 | complement(3289782..3289991) | PHAGE_Staphy_SpaA1: transcriptional regulator, pbsX; CLD_1498; phage(gi399498897) | 3e-07 | Click |
| 16 | 3290183..3290593 | PHAGE_Clostr_CD119: RepR; putative repressor; CLD_1497; phage(gi90592681) | 3e-14 | Click |