gi|170754211|ref|NC_010516.1| Clostridium botulinum B1 str. Okra, complete genome. [asmbl_id: NC_010516].3958233, gc%: 28.34% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### complement(2310015..2310788) PHAGE_Clostr_phi8074_B1: endolysin CS74L; CLD_2469; phage(gi431810380) 4e-30 MLFNLNPGHTLSGGDVGTRGINGLKEEVLTRQLVVEIDKELRGRGHGTNICRVDYASTLQESLNKQVALCNSVNADLNICIHFNTTVGGYGSEVYTYSGKYLVEADGVLKQLNNLGLRNRGIKDQPLALTKRIKAKTIYIEVCFIDSSGDVAILNKYGMNGIAKAIVNGVLGVSSNVAPTPSQPSKNNNSWINLDGKTGTINTPSGVNVRAGKSTSSKILGALPNGAKVRLYRKEGDWIHIYYPPHGGYIYGKYIRY complement(2310832..2311026) hypothetical protein; CLD_2468 N/A MKFLEQFLQIKKIIALLTTIVFCILAIKGSISSTEFLSVFTLIIGFYFGQSSARQAVKESKEQE complement(2311043..2311297) PHAGE_Clostr_phiSM101: hypothetical protein; CLD_2467; phage(gi110804030) 2e-13 MELKVCEEKHKRIEEKINVHDIRLNDHSKRIDKIEQSQSRTDAKIENLCDQLKQLVGIMKWYVGLTVGGLVSFFLYAIQHNIFK 2311464..2311931 hypothetical protein; CLD_2466 N/A MDDKSKETIIPNCVKNNLSVKFIDIQLFNGMITYFNTQHENNDFQILLHTTYGFIKCDVCNADPSNNFITPKNPMDPNCSNVNVDFSYIVKMKNERLLKFEEENPNLNVCDNGAILNLKNVSVYKDNLNDPVLITEQMLVFADQIIGFSAIPRNN complement(2312068..2312190) hypothetical protein; CLD_2465 N/A MLSYIKEYFLMGLYNEEDLDIFVTAKWMSVEGKEDIIKTQ complement(2312183..2312548) hypothetical protein; CLD_2464 N/A MKLLWIEKITQNKARVYSIHNFPEIVEDKTGGIVVDDILPKPQLKESEYAVHYINPQTKEQSYEICIREKTQEEISQKQQTELNAKLLKDNAEIQIELNKQKELNSSLLLKIAQLGGNANA complement(2312561..2314366) PHAGE_Clostr_phiCD6356: truncated putative phage structural protein; CLD_2463; phage(gi326536865) 5e-62 MIKSFPFNAVYDANGVPDRAYLAEDFARYFAKFIGTGVYPNPATGLQVVAIDSDMRIRIKKGDGYILGRDFENTDDYIIQLDVADGILSRIDRVVLRLDYLDRKIKPILKKGNYASSPVAKSLQRDADAYEIGLADVYVKNGVISIMQSNITDLRLNKELCGIVHGVIQQADTTEIFRQFQAWFNEQKNVHEGDFEKWVNEFKIATGKKFTDWVDDLKNSLDPNSDVVAQLQMQISENKLQLDNIDLSADKVTLNSSNIKSKNVKGALEELFTSASNGKNKIVTAITGKGIVANNTDSFDTLSNKIKQIPTYAPANLLIEVKRSTPITLSNDYYTIDKIALDIYGKIYCISTKILSKIDEDGYIYWQYKYDEIIQSVAVKNGYVYIGTYNNHIIKMDSSSGNIIWNNYYSSRYGILSIVIDDDNIIYAGTDNREVIKIDSTGKIIWKYDKHKNSVNTIAIDKNGYIYSGGGSRLVKLCSNGGEEWIQDFSYSIASMAIDNNGYVYIGYVYNGIAKINPDNGEQIWHVDLGLNISANSIFVDDYVYVASSDKMIRKINLDGLEIWKYYCDYNLKSIIKRYSYIYIGHDKIVRKLTDEIYVKK complement(2314373..2315530) PHAGE_Clostr_phiCD6356: hypothetical protein; CLD_2462; phage(gi326536864) 5e-47 MELYIFNRDLELIGILDTFTSLRWIRRYFKSGEFELHCALDSNTLELLKRDNVVYKKNDVEAGYIETRQLKIGEDGQEYLEVKGKFLTNYLDRRISWDRVNFSGKTEELMRKLVNDNAINPVNINRKIPNLILGNLKGFTEDIKYPNSFGNILEQLENISNTNNLGYRNILDIKSRLIKFDVYKGVDRTLNNGTIAPCIFSRDFENILEQEYTDSLNNYRNTTLIAGAGEGKDRKITSIEEGAGLDRYELYVDARDIQDTETVTVTVTDYDEEGNVTGEHEEDQEVEIPWERYEPQLLQRGNEKLEECSEIQTFDSKINTLGNNKYKKDYDLGDIVTVVDKNWRIRIDTRITEIEEAYEEKGFEVNVTFGNNIPTIIDKIKQTVR complement(2315726..2316589) PHAGE_Clostr_phiCD6356: putative phage tail protein; CLD_2461; phage(gi326536863) 3e-46 MDIKLTLKSNNKILEIAKDYKLFDIEGIETAEFELNIVNNANLDGSSVISKRIQKRPISISVDYKGENKEIERQKLISFFNPKNIGVLIVEYGDVKRSIEYEIENFKSKLTNVYDDLSFTVDLICPNPFWTNVELNKKQIALWKGDFHFPLVIPINKGITMGHREPSLIVNVLNNGQVKTGMIIEFFARGTLSNPSLFNVNTREFIKINKGMVAGEKFIINTNYSKKKILQDLNGVTTDILNYLDIVGGGDTFLQLDIGDNLFRYNADSNLDNLEVNIYFSPQYLGV complement(2316579..2319194) PHAGE_Staphy_phi13: tail length tape measure protein; CLD_2460; phage(gi29028708) 5e-101 MADGSIVIDTKIDSSGAEKGIGKLNSIAKAGAKGFGIAVAGVATAVGGLSIAAIKVGMGFEEGMSKVQAISGATGEEIKLLTDKAKEMGAKTKFSAGESAQAFQYMAMAGWKTGDMLNGIDGIMNLAAASGEDLALVSDIVTDALTAFGMSAKDSAQFADLLASAASNSNTNVSMLGESFKYVAPVAGALGHSAKDTAFALGLMANAGIKGSQSGTALRASLTNLAHPSKQMAEEMDRLGISLVDSNGKVKEGKALYDELRQKFSGLTDAQKTQSAATIFGKEAMSGMLSIINASEGDYNNLYNSLTNSAGAAENMAKTMQNNLAGSIEQLGGGLETLGLTAYDKFKEPMKDAIDTATEAVDSLVDSLSNGQLGESVDKIAVSFGKLIEKLSESVTNWLPKIIDALAWIMDNASFIASGIAGIGTALMVLNVANMIMGLVEAFKAFKAANEGATVAQWLLNAAMAANPIGLVVSIIAGLIAGIIVLWNTNEDFRNAVIDAWNAILGAAQTVWGGIVNFFTVDIPAAWQSLLDFFNGVPGWFADLWTTIQQAFVDGWNAIVNFFTQTIPQWIDSVGEWFNELPHLIGYALGYALGTIVKWGVDTWNYLVTNVPIWINNVVNFFATLPGRIWTWLVNTINRIVNWGQQTYTNMVNAATRAINATIQWFGQLPGRIWTWLVNTISRVAEFAVNLASRAREAGANMVTNLVEAVRNLPSRFAEIGRNIVQGVWNGITGMAGWIRDRVNGFFSGIVDGAKDALGIHSPSRVFRDQVGKYMAQGVGVGFENETENIKRSMKKNLSSLTAKMQATVDLETSKTSKAMTSGSRTINNTKAITNNDNGVTQINNFNQPVKSPSETARALKRVGRDLALGY complement(2319245..2319406) hypothetical protein; CLD_2459 N/A MKEVINIEEIRCPNCNQLLLKADYAKGEIKCTRCKKIIKLEIEQRTEPNHTIE complement(2319439..2319933) hypothetical protein; CLD_2458 N/A MGIFSRKNKNGDRSVNLSFVDGIEGYGKGLAVELSINTEKECLTIKSRVVKKPEVNLKFEQITGINVISEKDIIEKSKSTVGRAAVGGVLLGPLGAIVGGMSGIGNKQKSKTHYYMVINYMSKDREVKVLSFEIVGASLHWSSFVEELRSKINAETLENEEVYL complement(2319980..2320573) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLD_2457; phage(gi333798121) 2e-66 MNVLIDLVPTTIEIEGEEYEINSNFRVSILFELLMQDNSISEENKIIQALQLYYPVIPPNINLAVDKMLWFYRCGKDILPSKGTGKGKSTQIYSFNFDDDYIYSAFLDQYRIDLQDIEYLHWWKFKAMFKALKEDNEIVKIMGYRSMDLSKIKDKEEKKYYRKMQELYKIPIAKDEKDKLEEINNILLNGGDVSKVL complement(2320573..2320917) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLD_2456; phage(gi333798120) 3e-16 MKINGAELKDLDILDLEVAEKYEKAIKGIDGIAEKVQGMTIADSVRTQCNAIFKIFNDLFGEGTDKKIFGNKVNLLTCLQAFDELITQTNASRAEVEKIANKYSPNRAARRKKK 2320981..2321187 hypothetical protein; CLD_2455 N/A MLDKNTSLVWEYLKNHFATSDKEINLPEIQISGLSSEDVIKSIDSLENIGYININYKYKSQPIKSINL complement(2321204..2321428) hypothetical protein; CLD_2454 N/A MKLSKFKFDTNLGLVEIDGKRIDFVTDVNITSKSGQSFSTVTLIFEADAEVEGDILILPHLIGRKRTIEKFEDK complement(2321432..2321926) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLD_2453; phage(gi333798119) 3e-21 MAVRKRKIQANYLEVASVFELLGTGFTELNESPSAQTTSKRYINQSSASQSITGYEWTSDYTADQINSEKAIEYIREIGEMQKTGPDTEADYLIVDLDKPASTEGSYRARKIKVAISVDSFENNDGDLGVTGSFLGISDPVEGTFDTTTKKFTEGFTPKTAQEG complement(2321927..2322361) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLD_2452; phage(gi333798118) 2e-37 MIINSLRNYIRKCPHLDTFNNAIRVNVNYLAPDTDTYSIEEIPIEPIVKKYVNGDSVRQYAFIFTSREPYGADVLTNIDNSGFYEKFAEWIEKNNNNDILPVLENNLEPLEIKVTSTGYAFAVTEDTAQFQIQLKLKYFKKGMI complement(2322358..2322702) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLD_2451; phage(gi333798117) 7e-19 MATTVRIQIDKTEKILLKRYLNKNGQAQVKFTKEVAKECNNYVPFLTGRLKDMSVELKTDKIIYSAPYAAKQYYTNKGGNRGALRGKYWDKRMFADKGDKIVQTIADFVGGKAK complement(2322702..2323112) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLD_2450; phage(gi333798116) 1e-24 MGALFKNSDITIYNKYYDSINDIDKYQRTVIKGVNWQGKRNGTVSDKGLLIADSTLIFIDKLDNYVSPKKFLKLSNEERSNYFTFTPGDKIVKSEVDFEITGIKPYRIADLEGEFDDVIDIKSINILTDHIEVEGV complement(2323114..2323380) hypothetical protein; CLD_2449 N/A MTTEQRKAVLVIRNYLNKDLEDNYILENYDLAVEQLINNAAKLENIKTPGVKSMSEGNQSISFESGASAWSITEDVKALLPTPYARMW complement(2323370..2323555) PHAGE_Staphy_phiMR11: putative rho terminator factor; CLD_2448; phage(gi162290153) 9e-05 MGLATFNRMRRQLEKEKNKISLEDMTIKELKEECKRLELEDYKNLKKEELIELLRGVLNDY complement(2323605..2324552) PHAGE_Entero_phiFL3A: coat protein; CLD_2447; phage(gi281416261) 4e-103 MSTKISDIIVPEVFNPYVVQETNRLDAFVQSGIIASDPELDVLATSGGIIVNMPYWNDLEGDSEELSDKGSLTVNKITAGQDRARLHMRGKAWGVNDLAKALSGDDPMAVIGQKVAKFWVGERSKILFKSLAGIETTASNNVHDISALTGAEAIISVGTALDAKQKLGDNAAKLTGIAMHSAVYTKLQKNNEIEFVPDSETKVQIPYYLGYRVIVDDQCPNSSGVYTTYLFGQGAFGLGNGAAPVPTETDRDSLAGEDVLINRQHFLLHPRGIKWTETTVTGKTPTFAEIATADNWNKVYDTKNIRIVIFKHKIA complement(2324576..2325214) PHAGE_Deep_s_D6E: scaffold protein; CLD_2446; phage(gi423262331) 3e-25 MLKSELLKLIESIEDNGEVDEILKSTDFAKSILSLDNFKNLVATDKDFKSFMDSEKDKYNSKALDTWKDNNLQSLIDEKIKELYPEDDPKDLELKKLQQEMENMKKETFKKELTNKALKIATEKGLPTDLVDYFIGQDEEATNKNLETLEKVFTDKLETTVKERLKDNSYTPPSGSAGVNNPWSKEHFNLTKQAQILKENPELAAQLKAAVK complement(2325483..2326076) hypothetical protein; CLD_2445 N/A MKFKMKPVAILFMALLLSISVPLTAFASTSTKNSLVNVVVSDSDAKTIIAQVPKEHVAEYKEKLKNPDFKQEQINMMNGSTRTLPEGKIITQKYLDRSDVKRAYEAVQPGAFESIIIDLGAGAALGQIMKALNASNAWTLTATVVAWAVEYIRIKPQDWWTQSYIMLLENRISCVRMSHIENLKPTYPAAWLILERL complement(2326285..2327007) PHAGE_Strept_1: minor head protein; CLD_2444; phage(gi39653715) 8e-11 MTREEEFSQGLYDEANEQLKEVYKEQKQNKDELLREIALIMFTYTIIDGLMSLKSKNKRNEYKSLSKLITTATQGQKATQTRVINNILGNTVKNTFDFYSYNANLKDVKKIIENNFKGKHFSTRVWDNEQKVAKHLHKQVKNFLDGKINVNQIKKDIEKTYNNNAYEARRLVETEVNRCCSNAFDRFCKETGVKKVRYNATLDKRLCSDCAQYHDKVFDFDKKIETPRHPLCRCFYIVEE complement(2327007..2328284) PHAGE_Staphy_SpaA1: phage portal protein, SPP1; CLD_2443; phage(gi399498867) 1e-38 MIKIIDIDIDLLKKAYEEYKNNKITYAKMYAYYKGNTDAMANYKMVTERSNNKTPVNYIKKFIKEEVSYSVGNDVNYISKSGNENIVNDIDYYIDHWSEGHDSNLAKNMLIYSLSYELYYVDREGQFSSKVIPPTQGYATIDDFGNISFFMHSYKLKFDDTTYIDVYTDKEILHFNDEFEKINKPTKHIFGAVPVALCQLSEEGKDDTLFKDLKGLQDAYETNLSDISNEISDFRNAYMVLTGVQIDEKDIPKMKELGVIQIKTKDGKAAWLIKNINDTFIQNTLNTLEDKMYQLSSHINHNEKMQSNLSSLALRARLIALEEKCKLNQKSIADCIKTRLKFLFIYLKVIKNIEYDFRDIKIKFTPNIPQDDLMTAQVISQLGDKLSTKTGLSLLSFIENPKNELQKLKDENPIDLDNMDFGADE complement(2328288..2330021) PHAGE_Rhodob_RcapMu: large terminase; CLD_2442; phage(gi356870870) 4e-16 MTEEQQNRYLLFKYLTEQFTIAGADDPEEKAKEMILNNSSNLFGYHGLAWQLGKLNMEFFCMYFLQNTFLPKENNAAAPIAKVHKEIWSDIENAIIGEGADQIGRILPRGTGKSVFGTFAGTIWAHCYKHKKYTLICSDIGSTAEKFISDIKNTLLENEYIKKAFGIILNDKDKRYKCNSTQLELTNKTFIEAISSASPMRGRKYDNCRPDLIILDDYQSEDDVRTEQARENKWKRYSDDVKYASQKAVIRNGKIIKKGTTFIALGTLQHKECFYSRLLKMPTWKFKKEKGVLLEDIDLCFTTGLWGEFKSILFNFKNDNRLEDAKEFYWQHQEKMRFSLLWAEFWDCLDIALSYYENPSSFKQEVQGDVDSIGQKWFKGVRTETRKEIETHNFIKNMLLIDPASGGGKKNDYSAFLVGSMGDNNLKYARKAELTKINARIEFDKYIDHAIKLLKDYQDITHLYIEKNTFNGADANAIENKINDDPMLRNRSITIINEHQKKNKDDKISTLIPYINKGQIIFAEEDSEFTDQVLDFRGQKYSVHDDAPDITAEFSLRIENIEVVENVVLLDRRKFGL #### region 2 #### 2332318..2332332 attL N/A TATTATATAAAGAAA complement(2334618..2336303) PHAGE_Bacill_SPBc2: modification methylase; CLD_2435; phage(gi9630267) 1e-58 MLKVRTLFSGIGSPERALKDLQIPYELVDFCEVDKYAVKSYCSVHGVSEEKNLGDITKVWGRNLPYADLLVWGFPCPDISVAGKQKGIKEGETRSGLYYEGFRILKETRPKYSIIENVKNLVGKRFKADFESMLEDIESLGYNNYWKVLNAKDYGIPQNRERVFIVSIRKDIDTGIFSFPKGFDNGLRLKDFLENEVDEKYYISEKATQGLLRALKRPHTPKMLNKDSEYSPTLDTRVGALTHRSPYMCIPCITPDRAEKRQNGRRFKENGDPMFTLTSQDRHGILQVGNIVDTGNWGNPQRGRIYSPDGISPALNTVGGGGLEPKILKYKRTEYRIRKLTPKECWRLMGFTDEDFQKAKDEIRPILNGICINKNEFIALDGYRLALRKGNFETKEPVIVAADLIKVINKVKYECNVKIYYNDNYVKFKFDDLEIVGYRRQGNYINYNSIIPENYNTKVTLKIKPILDILKDYKKNKFKVVDLDFQNDKLIIKANNDIATVEESITIELQGEPLEISFNADYLIDAFKNYDNATLELTYCVNPMVIRENNKLDLVLPVRKK complement(2336408..2338102) PHAGE_Lister_P35: gp33; CLD_2434; phage(gi157325398) 3e-52 MLFYDFEVFKHDWLVVIKDTDTKKTHIIVNNVEELNNFYEQNKNNIWCGYNSRSYDQWILKAIIAGFNPKELNGHIIVDHKPAWKFSSTLWKIQLFNYDVMTSFHGLKQLEGFMGNDIRETTVNFNIDRKLTVEELQEVIFYCNHDVEQTMEVFINRIEEFEAHMGLIKNFKLPLKYISKTKAQLSAIILGANKQDHEDEFEINIVGTIKINRYREILNWYKNPLNRDYKKSLEIEVAGVPHIFGWGGLHGARDKYQDEGIFINSDVGSFYPSLMIQYDFLSRNVRDKSKYKEIYDYRMQLKKEGKKKEQQPYKIVLNSTYGASKDKYNNLFDPLQANNVCINGQLMLLDLIEKVIEGVPGAKLIQSNTDGVMWNLENKSDVEVYKKICEEWCKRTCMTLDHDHIKKVVQKDVNNYLIVMENGKIKSKGAYVKSLNKLDYDLPIVNKALMEYFIYGIVPEETILNCNQLKEFQKVVKISSKYLYGYHGDKKLDERVLRVFASRSRSDAGVFKVKTEGGTKEKIASTPLRCFIDNSDISDKTVPRKLDKQWYIDMAWKRIKDFVG complement(2338113..2338271) hypothetical protein; CLD_2433 N/A MYKCLRCGSNLTKYDNKKNKSIRSCQSCNSKYLIQNGKLLKVSNIDFRLLIK complement(2338324..2338782) hypothetical protein; CLD_2432 N/A MANIWDKFDKNIDVEGLKADAKEAAENGGGDFKEVPHGEYEAEVNKLELRESKKGDPMLSIWFKILTGEYKGSLIFYNQVLSSGFGLHKANEMLRSLDSGVEVEFESFSKYNDMLMDMAEAIDGKLEYQLSYTANKKNNKFSEYEIKDIFEV complement(2338785..2339066) hypothetical protein; CLD_2431 N/A MILEFENYRMKTDSRQFVVQKRKVVQAGRFTKEENIGKEYWEDEAYCTTLNFALKLLRKKVLLDNDDLKVIINKLDELESKINEFTSLLKEEN complement(2339066..2340772) PHAGE_Strept_PH15: putative NTP-binding protein; CLD_2430; phage(gi190151434) 1e-16 MQYSHSRVESFKSCPYKYKLRYVDKLKTIPNQDANNALICGNTIHLGAEKDLKAALKFYKSNYYVLTDLHINEIIKFKYLIPKLKELLLDINIYSQEYLISTHRFRGIVDLIVKNDDGTVDVFDFKYSNAIEHYMESPQLHIYKYFLEQQGFKVRKLGFIFIPKIPIRQKKTEDLYQFRKRLLQELKASEIQIAEVPYNPNKVVEFMDSIIDTKEVKEYKKNPTRLCDWCEYQKYCFEGVDYMILPSTERREISEVSKKVMWWYGAPFSGKTTLANKFPNPLMLNTDGNIKFVDAPFLPIKDKVVVEGRMTKRTLAWEIFKEVIEELEKKQNDFETIIVDLLEDTYEHCRLYMYDKLGIEHESDNSFKAWDMVRTEFLSTLKRLMNLDYENIILISHEDMSKDVTKKSGDKVTRIAPNIQEKAANKIAGMIDIVARVIAEGDERFMDFKPSEVIFGGGRLTVESNRIPLEYKALMKVYDEVNVGKKEPKKEKTTPAKDKKEEKSTRRRSKKEETKVEDKKEEEVKETTSEEVNELKEESTKEIKEEKPVEETKEEKPKRRRRRKADEE complement(2340784..2340957) hypothetical protein; CLD_2429 N/A MGDLLKALNLIKETCDKQEGCKKCPLSSEDICLITEHCPSEWDVQTEPIVKLMLFKE complement(2340963..2341766) PHAGE_Clostr_st: hypothetical protein CST053; CLD_2428; phage(gi80159739) 6e-49 MIKVIKINDSLNVSFDYDADIVSKVKTIPGRKYNPNSKSWDMPLQAIHKLKELFNDLDISEDVDQDYKAPKYDFNQELESVNYKPLKIFAEWCLNQLPDYFYEVAASSTGKYHPAYALGEGGLVRHTIAAVRIAEELFKCETIQEFEFREKNIIRVALLLHDGVKHGLDGSQYTVTTHPIEVVKYLEDRYFEVSEETLPDEVIEVMECDLWEDIASCIKSHMGQWNTDYKTGEEILPKPQTEMQKFTHLCDYLASRKMLEVNFNVEG complement(2341759..2342088) hypothetical protein; CLD_2427 N/A MNKEKWQEEADELVDAILDLKEKGKRDKEDLDSLKMELVDLLESKNINEFVGKNGKANFVDFEREGLVKENVVETVDGVNKGRIKNINMRDLTKDIKVHFINVRGYLGD complement(2342093..2342389) PHAGE_Thermo_THSA_485A: VRR-NUC domain-containing protein; CLD_2426; phage(gi397912645) 1e-14 MAAEKKFENEIKKFLSELPKTWFFKYWAGPMSKAGIPDIIACVNGKLVGIEVKAPNGKPSELQKRNIRLIQESGGVGYILYPKDLSKFKKDMKELIRG complement(2342389..2343216) PHAGE_Lactob_Lj928: putative replication protein; CLD_2425; phage(gi41179303) 8e-16 MNKLQLKVLENKPAEVHFNFDEISNYLDSTLNKYQGIVVTEETIKDGKKVIADLRKGKKSLDEFRKKTKKELTKSVTEFENQCKELSKKFDEVIDPINEQAEQFEIKRKEEKKVEVQKVIKIVCELKHVGDLPLDDKYLNKSMSLKAIKEDLISIANQMLLEKANHKKNVALIEGKIDLANAKYGVTMVKEPYVNMLEYEDVNNILTKILEDGEVLKNKLADTSKQKTASFKQVVQAPKKNEEIFVDTYEIEGTEKQLDDLEDFLNKNNYKWSTK complement(2343209..2343655) hypothetical protein; CLD_2424 N/A MKTYKTWEVIKMLAEDPKLKFEGKALNKLTKILSVNEHGILKCLQNKMEISIFAEEMWTLVEEPVSLMEMLNSDGKCRVEHELIDKNLQDEISTTDEITLKDYENLKANKYMPLHNLMSVLPWILNSQNFKEVIKNGKWYLEEDERHE complement(2343659..2344756) PHAGE_Thermo_THSA_485A: SNF2-related protein; CLD_2423; phage(gi397912655) 3e-31 MIICQKSKLQDWCEHFKTYYPEYNTFIYSKTREIPSNSVVIINYDLVWRRPKLSQIENFTLMLDESSMIKNPTSKRTKFILKLKAENVILLSGTPCGGKYEELHTQCKLLGWNISKKLYWQQYIKFINMDVGGFKVPKVVGYKNVERLKQKLHDHGSIFMKTEEVFDLPEQVEISVLIENTKEYKKFKKDRLITINDTELVGDTSLTKMLYLRQLASQYNPNKLSSLKDLLESTEDRVIIFYNFTEEMEQIKEVCGRLEKPISIVNGQTKDLENYKTKDNTVVLVQYQAGAMGLNLQLSNKIIYYSLPLASELFEQSKKRTHRIGQTRTCMYWYLITKGCIEEQIFETLKERRDYTNKLFEELEG complement(2344916..2345086) hypothetical protein; CLD_2421 N/A MLKRLLAERGVILTKELSDMVIADIKFNKIRFNKCTSIEELLIITERCNKALIKCA complement(2345101..2345394) hypothetical protein; CLD_2420 N/A MDNKLLTQKDLSERWQVSVKAIESYRQQGLITSVEGLPSIRFNPQHIAELEGTKLERFSPLERRRMERELEQIKQENEKLKGILSQTLANLAPVINL complement(2345414..2346163) PHAGE_Clostr_st: putative antirepressor; CLD_2419; phage(gi80159698) 3e-19 MNEVTTFEGQEVKVKTDKGVTLINLAHTAKCCGLIREDRGYSKVRWIDIKNKLKLIGKNCVDEGSSKEIQYILDEIENTDDRNTIYMSGWLSKRLALECHSEKAMRYKNFLVTLDETREQGQLQSVSQETVLQLAQGMQMIGQVVQGMQTAMTNIETYVKDSIQSKDLQIEKTMNLIGFRSINTKRLSDKLKEQLSEHLGIAVNASSNVYRRAKGKIFKEFKVIKWEDIPVSKYNTVHAFIEEVVCKNI complement(2346180..2346509) hypothetical protein; CLD_2418 N/A MDPKLVDYINKLEKENLELKKQLEETQKDIISWNNLKTLINNSLSELDETRGPYSYLIRHVESGINMIIRATFNLKFIKDIDETNYKQSKEFTEMVLDYVKKNFIKGKY complement(2346532..2346756) hypothetical protein; CLD_2417 N/A MSNHITELRKNAGFNTVKNVTSKLEISDSMMYQIEGGYKKPSPNLAIKMSKLFNCTMEDIFLPYGTTNSDKLED 2346978..2347427 PHAGE_Lister_B054: gp41; CLD_2416; phage(gi157325325) 3e-13 MLNERIKKLRKERDITQEELAKNIGVSTSMVGMYETNARKPSYEVLSKIAKYFRVSTDYLLGETNYKTTGEKFDAKLNSDKVDQIKEEESLYTTGEFTTPQAAMQFILKQPSIMGYGGFDTNKMTDEDIIEFANELLNLLKMLGPKYNK 2347477..2347893 PHAGE_Thermo_THSA_485A: protein of unknown function DUF955; CLD_2415; phage(gi397912661) 4e-09 MKTEEIIQLAQDIKNQYGGNPIKICTALGIKINYINLKPNIYPAYTLKISEKPIVNLNSHFTTNSQKVLCAHELGHVLMHDDKLLNQFGDEHNGIEEYEANLFAVALLFDQDDLNIDMSNMDNYLLKELLDVNIKLKV 2348078..2348092 attR N/A TATTATATAAAGAAA 2348234..2348347 hypothetical protein; CLD_2414 N/A MPKVIIVEPDITPEENEENLKRVIEVLESIAQEIAEY 2348452..2349516 PHAGE_Strept_PH15: putative integrase; CLD_2413; phage(gi190151416) 4e-38 MDYNVTWRKKDKGWQFIISYKDSIGKWKQKSKQGFKTQKDGKPVIDKMLKELKKNVKTVNKSYNKLTFSEFADIYVEHEKLYKSIKTIESLITVLHKFEDLNKKEMCKITTLDIQKIVDKVTKEGLNNNTTRYYLKRLNTLFKSAKEEYNIIDSMPTKNIKVGKPVPTKKKALTDNEIKNLLEDFKNNKYYLLNFLAVNTGMRLGELLGITWDNVDFKNNTITVNKQWKKIEKGVWGFGDVKSKNSNRTIPVSNIVIKELMNHRNVININNRVLNFRSTNSVCAIVNGKFKKHGYTITFHELRHTYATRLIANGVDFKTAAQILGHSVEQTLKTYSHVNNDMLNKAHSVIEKIF #### region 3 #### 2676741..2676752 attL N/A ATAAATTATTTA complement(2679631..2681271) PHAGE_Clostr_phiCD6356: truncated putative phage structural protein; CLD_2071; phage(gi326536865) 6e-81 MEKSFVFNSVNGDRRYKAEDFREYFASFISNGVFPNPSNNLQVIANNDMTITIKAGKGWINGAIYINTDDYILNIDVADGVLNRIDKVVLRMDTAERKIYSYVKKGQFASSPTAPTLQRDADAYEIALADVAVNKGAISITQANITDLRLDKNLCGIVHGTVDQIDVTTLFNQYSTRFKIKSEEFEKEFEDWLKTLKDVLGEDTAGNLLNLITKNTESINNIKSDLADITKDSYPIVEATGTNAYVGVSDKITSLKKGTRFTLFIGNNATGNCTININNYGAKNVKDPFGKIVNNLKSNIPYNLCYNGVDFILQGKGGGGNLQPNQALAGYTFTNDNGPQVGVGDPNLKPENILNGKTIFGVQGIVKRIEDIPDYLSNSPGDTHVAVTKDYIWTRKGSKNGAAYAFDINGTLKKTVIRGGSENFFAASDYHMLWCWDGSVSNFYLTDLEGSKITSILSSDYSDVGAINSSTRRFFIVTGSWLKVYNFDGTLLGESSVTKNTQIIAIVPTSKGAYFCTSGGIAIFVTNSGEQKETTYVSALFSNIFQ complement(2681278..2682156) PHAGE_Clostr_phiCD6356: hypothetical protein; CLD_2070; phage(gi326536864) 5e-98 MGLILHREFVYGEGGQEAETLLIKGIMIQGLSKRRIIIPDIGQEFDSCIGNQETIMKYFVYKSCISPTDLNRKIDNLIIAVDKKRGENDRWRGAYESLDEKLKEIGEYSNLGWNIVLDHKQKKFIFDVMQGKDLTVNQNTNPPVIFRSDFNNIKTRHYTESIINSRNSLYIGSKEKLVLNLGDITGFERMETFLDSTSEEVEDIKKEGLVKLEEIKELKTFELEINPNNTFVYEKDYDLGDIVTIQDKKLKVTMDSRIVEAQEVYSNDGMKLKATFGTRIPSLLAVLKRMVK complement(2682349..2683215) PHAGE_Clostr_phiCD6356: putative phage tail protein; CLD_2069; phage(gi326536863) 9e-113 MQKLIYRNSKGQEVTLSNSRPFILESVGNVANTSAGINTSYSAGQDGVSIDNISIKEKLLPITGGLVGDSFEDVDRKREYLTNIFNPKFHGELVYTNNAISRKIKGRVQDITFQDKIGSIQKFLIQVLVPNPFWEDIYTKKEEVALWVGDFEFPLEIPPEGIEMGHRVSNLIVNINNTGAVECGMKIQFKALATVVNPSLFNVNTREFIKINRTLSAGDVLEVTTEFSNKRIELVKNNGVTQNVFNWIDLDSEFLQLEVGDNLFRYDAESGIDNLEVAIYHTSLYLGV complement(2683232..2688592) PHAGE_Clostr_phiSM101: phage tail tape measure protein, TP901 family, core region domain protein; CLD_2068; phage(gi110804068) 0.0 MAEDVGSLVVRVAMDKANFEEGIQNLNRSMRLAQSEFKNATSGLKDHGQGLDGLKSKQEMLSKSIELQAEKVAKYKAKITESEKTLEDNSKAHEKLKEKVDNAKKAWEDSEKSLGKNAEETKKLKAEYEKLDKQYADSEEKIRNNVRAIENWNVKANNAEAKLKEMKSSLSSVSKEIDKQENSWNKISKKLDSAGNKFKTAGKKMESVGKGITTKVSAPLAGLGAIAVKTTADYDDSMSQLKAITNSSTEDMKKLSDQAKDLGVKTRYSAKEASDSMVMLGQAGYRTTEIMNTMPAVLNLAQAGAIDLTQSTDVLVSSMSQFGIETKNASHVADVLSLGANKANLGVNDMAEALKYAGSMANTAGWSIEETASAIGLMSNYGIKGSQAGTALRGAISRLVKPSEASAEKMEALGIKVFDNNGKMKSLGEVIDEVKKGTSELTEEQKMNTLVTIFGQEAIAGINALMNEGGDSVRKYADELKKSDGSAAKAAQTMEDNIGGAFRSLKSAMEGAAISIGSAAAPAIREITDKITELTRKFSNLSPEMQKGIVKFGAFAIVTGPVIVGIGKLATGFGSILSVGSKVAGIMGKVTLATKGAEVASATAGATMATTGTKAGLLSTAFSGVKGAGGLAASGVVKLAGALGMSVPVLGIAALGVGAVGFGAYKLHQNLKQDAVPAVDLFDKKLKTTKTTVDQYGHKTTVATTKLVNFTKETKKAVGAYMEINKKASSALTSLVVNSDKFTKQAKDKVLKNFTDMSKKSSKLSNEQKNTMTTNFKKLVTDTGVLTKKNKDEIIKQYSTMVNGTKGLTKKQKDQTIKDFADTLNKSTAITKQQSDDLQKIYKDMGDKIKVGLDKKKTDELKSQQEFFSRSNVLTTTEEAKILQTTATSWENKKKTIDGLQSQINSIIKNAADNHRQITEDEAKTIDGLQKQMKENAVKTLSTSEVEQKAILERLKSYNGRITAEQASDTIKNAEKQRQGAVDKANKQYDGTVKQIIRMRDESKVITADQADKMIKEAERQRKETINKANDQKNQVVSKIKGMNSDITNSVDTSTGKILSKWDKLKQWWANWQPDSKQFSYTLRGSEREAVQKGGKAYATGTTNATRGWNLVGEEGPELLWFDGGETVLNNRDTMNLFNKLDNKIGYNTAKEWGANLSQGLADGISSTRGLVHDSILETANGINFKTRKALGINSPSLVMQELGKFSSEGLALGILENKDKVESAANLAAQIIKDVTENKLDDIQVKTNTDDKEIKDRVARQLNWGVYNKDEYQRYLNFVDKLNKEEVEKSKEFLKEDYENRVKSLDDRLRILKNENSIELQTEKARVDQEIAYYQNLQRNTTDKSAKKNYANQIAALRQYQKQVLNTTKANQKVQVDSLERSKKALEEYYKDGLNLLDKREKEVKKSLKIEENAFKDLMTTYNTAIKSLKVKTGDLVKDLENQEAIVVVQSKRIEDLRKRYEDLAYTLGITASETVKAREEFENARVELENMANAVKDAAKNLEDYIDKFQQDIVNALKQRYEDELKLQEESINTQIQNLEKWKDESIKRIDDVYDAKIKAIEEQLEEEEKADKDAEEMKKINSLKSAIDFEHNQFNKAEMQQELNNLLKEREKRLHKEQLEEQKKKLEKEKEDKLQNINSIYESNKKSLEKQLEDYRSFCEKRTQDAVLQAQAEKMIMDNNQKEIVELLHSYSKEYEYAGQTLGQKLVDGFSPKIQEIKDMIASITAEINEAKQKALDLSRSGVTTNNNSVTNNRNNTFNVYASNNNGGRSIESELRSLTFSMA complement(2688854..2689180) hypothetical protein; CLD_2067 N/A MNGRDIKEIGVSIKLDKERHLIFDLNAMCELEEKFESIDAAFEKLSENMKMKDLRYTLWLALKYEDEEITEKEAGRLMTITEIDIILSKLGEALLGSLPEKNEDEKNR complement(2689216..2689797) PHAGE_Bacill_WBeta: putative major tail protein; CLD_2066; phage(gi85701389) 4e-22 MAIKGLHGFRYCILENDDAAGFEYEKEIKKLTGARSIKVDNKVNDAKLYGDDQLLETASAIGSIDVDIDVADLTLEQQAELLGYKYENGVLIEDKNFNPPYIAFGFMAPKSSGGKRMVWLLKGKMQPMSDEAKTQDDKVEFQTQKAKFVFMPRVNDGNHKFKADTNTTGAPTEEEFFSVDFLKTGKKAVEAGA complement(2689800..2690144) PHAGE_Bacill_WBeta: conserved structural protein; CLD_2065; phage(gi85701388) 6e-09 MSVNKLIIDTLKPLGIPTRFQTYKGKEETYITFFCYNEQGECFADDIEIATGFYMQTDIWSKENIEQLKIDTVKLLKKAGFIKRPGAPDLYEPDTEIFHKCLRFFYYIENKEEE complement(2690141..2690530) PHAGE_Bacill_WBeta: conserved phage protein; CLD_2064; phage(gi85701387) 2e-16 MASMELEGMDNLIIKIEDMGKAGTRIENKALKKAGEVILEEAKITSVFKDRSGDLREGLKVSGVRKKGGNKFVLVGIQKGDNSKIFYGKFLEFGTSKMKARPFMGPAYESKKEEAKEVIKNELRKGLGL complement(2690523..2690849) PHAGE_Geobac_E2: putative head-tail adaptor; CLD_2063; phage(gi148747735) 7e-11 MDPGKFNKKIKFVVIGDGTDDDGYPIKGEKTIRKCYASVRGLRGREFYNAAAVQAQDDKIFNCRYFKGLTPDMQIKYNDKLYNITSTNDLNEKHVEYEIHAKEVKASG complement(2690830..2691156) PHAGE_Clostr_phi3626: Gp7 protein; CLD_2062; phage(gi20065970) 5e-15 MQLDELKEYLRIEGEDEDVTLSSLLFAAKSYIKNGTGLEEDMIKNNEILELYKLCLKLLISHWYENRVIETTGPNFHKLSFSLDSILIQLEAEYLKIKRSEADGSRQI complement(2691369..2692496) PHAGE_Staphy_phi7401PVL: phage major capsid protein; CLD_2061; phage(gi448244667) 8e-89 MNRYQLEQMLAGIGQDLKSANEKLTTMYADAKTTLEARNEQKNTVKDLEERFAGIKAQIEEMDRQAEQKFKNKVITGENEKDKRVNAKAELIKATMSNNPVSMEVKAALGDNNSTGGEKFLPKTMQNELLHEPFVKNPLRDVSTFTNETNLEVPKITFTLDNDDFIADTETAKELKADGDTVQFGRHKFKVFAPVSETILRGTNTNIVQTVEMALESGLSAKEKKVAFTATSKIGEEHMSFYSTKNAIKTVEGVNKYKAIKAAIADLHEDYRENAKIIMRYADYTDIIEMLANGNATLYAAQPEQILGKPAIFCDSAVDPIVGDMRYSHFNYDLDMLYERDKDIKTGMECFVLTAWFDHQIKLKSAFRIAKTTTP complement(2692489..2693247) PHAGE_Lactob_JCL1032: putative ClpP protease; CLD_2060; phage(gi418489116) 2e-60 MANKKFWEVKNSSENENIGETYIYGDIVSYKWDDTDTTAKSFKEDLDSLGDIDTLNIYINSPGGSVFQGTAIYNIIKRHKAKINIHVDGVAASIASVIAMAGDTIFMPKNSMMMIHNPWTFAWGNANELRKQADDLDKIRESLIEAYLSKAGDKLSRETLIEIMDNETWLTAQECYDYGLCDELVEEKEIAASINTELFAKYKNTPKELLNKKIKPKEPIKNTEKIEKDEEIEALIARVNNTLKFEEERIHE complement(2693237..2694421) PHAGE_Staphy_phi7401PVL: portal protein; CLD_2059; phage(gi448244665) 1e-72 MGIWNKIKSLIKAPFKTSIIRDYSSGFSFFNNDLATNETIFSAISLLSNTKGSLPLKLYKNYEVVKPSENELARMIEYNPNSYMTMFQWVRCMETLKNTKGNAYAIKEYDCMNQPIKMHILNPDFVTPVIEKDTKDLYYEIRDENGLRYVHNSHIIHFSHISMNGYKGISPLDVLRNTIDYDREIKEFSLNQMKNGLKANLVIKLGAKLSKESMDEYTEMLGKFQKNGILFVDQGKEFQELKNSSFIDPKVFDVENITIARVARVYNIPLHKLLAEKQSYSSAEQADLEYIKDTILPDIRQDEEELNKKLLTETQRNEGYSWKFNLNGLARADMKTRGDFYFKGIRSAWFTPNEIRALEEMQPIKGGDQLFVSRDLIPIDKIDLLLKGGEKNGK complement(2694437..2696137) PHAGE_Bacill_WBeta: putative phage terminase large subunit; CLD_2058; phage(gi85701381) 2e-153 MSDIARYYTIVYRYACDIVDGKIKACKKHIQACKRFLDDLDKSQNEDYPYFFDYEELYKFYKWAGLFKHRAGVLKGKKIDLVPFQLFIVGNLFCWKHKDTCLRRFRKAYIQIARKNAKSQLLGVIASYECFLSEEQAEVYLAGWDKEQSSIVYREIKYQIESAELLKAKYTDSYGRITHLKSGSFIKPLSREAKNTGDGTNPSLGIVDEYHAHKTSEIYDVILSGMVAREQPLMVIITTAGFDLSRPCFKEYQYVSKILDSNNSVENEEYFVIVCELEPEDDIKDESNWIKANPIVATYENGLNYLRGELKAALDAPEKMRNFLTKNMDKWVDMKENGYMNMIKWSEAEEVFTLEKFIGMDCVMGMDLSTKLDLTSIAFEFCIDGIYYTYQHSFMPQETYEKRMREGKYRFDLWVEEEHLTIIEGAVIDYNAVRNYFKDVESEYKINILEICYDPAHATHFIQELEFEGYICIEVRQGALTLNEPTQDYRARIYDGTMKHPKDGLYTWAASNAVCSNPNRKQEYIMLDKAKSSEKIDPMAATIDAHVRGMVMLDDGAGDIFYSPDI complement(2696134..2696598) PHAGE_Bacill_WBeta: putative phage terminase small subunit; CLD_2057; phage(gi85701380) 4e-25 MARPRQPTDLLLVKGKKHLTKAEIEDRKSKEIKAPSDKVKAPSYLPADLKKEFNKIAKELKEIGIITNLDIDALARFIIAKKMYLELTKQILEKPEMMIVDKDIVTTQDKLFKQCRSSASDLGLTISSRCKLVVPKKEEPDKKTEEEKLFGSSL complement(2696870..2697106) hypothetical protein; CLD_2056 N/A MEIRKDVLKIAKGIVQKKPEEIWLVSTNTLMAKRYWKSLKEIIPHVFKPMKPIFISSRESMIMGLNSQNTIILKCGPW complement(2697197..2697670) PHAGE_Bacill_WBeta: putative phage endonuclease; CLD_2055; phage(gi85701432) 4e-12 MAQRSLRQCKQRWCKNLTRDITGYCEEHIHIYEERRAQGNKYYDKHIRHSKDKKYTKFYHSDEWEDLRKDVLTTYNGVDIYSYYIENKAVTANTAHHIIELKEDWDKRLDKDNIFPLTDANHKKIHSLYRKDKKGTQELLRELLERFRKQFGISPLP complement(2697670..2698092) putative non-transporter ABC protein; CLD_2054 N/A MNKVLYECRKCGKTFINNGNRDGLNCDKCKGSLIPSGYVDELQNGIRKMKDKIENAETYIVNKKNKAREVTIKINLDTIEFENKLNRIEKKLERIKSLEDTLKFSKDFNEVKNITINNNVDIKDIMKRCVEAVMSMEPLQ complement(2698137..2698439) PHAGE_Bacill_WBeta: conserved phage protein; CLD_2053; phage(gi85701429) 2e-06 MEVYCNKCNKDFEIKAKEKKYADGIVELYFKCPYCKERYTSFFTDKNIRQKQKKVRKLYEQYGKEIDEHKIIELLEQIDDLKVEIGNDMNKLKNKMLGTQ complement(2698600..2699145) PHAGE_Clostr_phiCD6356: putative site-specific recombinase; CLD_2052; phage(gi326536904) 3e-53 MNFVEPIRDKQKVRDIQDYLKQTNPRNYIMFITGVYTGLRISDILKLKVKDVKNKEGIYLREKKTSKQNIIALNKLLIKEYKWFCGNLEDYEYLIKSREGINKPLSRVRAYEIIRKVGKDFGVENLGTHTMRKTFGYHYYKKTKDIGTLMNMFNHSAPSITLKYIGISQDTMNKARREFNI complement(2699142..2699357) hypothetical protein; CLD_2051 N/A MLSIYTSYICCSCKKEFVLLSEDIERFKGYLVCPYCSSRKIKKQKITDNLKECMQEKSYKRINGAIRQVTK 2699537..2699548 attL N/A CTCTTATATTTT complement(2699540..2699968) hypothetical protein; CLD_2050 N/A MKETYKNLLELIKINENIKHNCENNLKLIEKFLLKQGPKGFTSGTSYLDADCIHGSKGEMHIEDYGKLMIECEKLTNMIFLQDNILKGLYETKKNIDEKLKNLKGIKYSVAYLKLVEGYSIQAIASKLNISESYAMKISAKI complement(2699952..2700122) hypothetical protein; CLD_2049 N/A MLETILGTIAIVSVTMLIAIRKVKKDKNVLCNYNCENCREQDVCCIKKEGKNERNL complement(2700124..2700414) hypothetical protein; CLD_2048 N/A MFKRGEYSIKEENFIKDNYLKMSNKQLAKELNRNIQSISNKLISLGLYRFDFNKKLSISTPDEGTIKIKNKFKVDKEQAKLIYKNWRKNYIKSRVI complement(2700571..2701566) PHAGE_Thermu_26: phage XerD-like integrase; CLD_2047; phage(gi157265417) 5e-21 MCNTNSKDEVVIKLVGKLSLEFPEIDQLKVREIVEEVLYKYNILPQEKALMTSDVEEKLQIYLASKKLDGLSLETLKNYQYNLAIFADYLRKPLATINTMDLRMFLGARCKNMKPSSMNGQISILKSFFGWLEAEEYIPKNPAAKLKQTKEPKRVRKPLTEEEAELLRQACETDRQKALTEFLISTGCRLDEVFKVNKDNINWHEMSLFVVGKGDKERKVYFNTKAKILLKKYLFSREDDDPALFVTSKRPYHRLGKRSIQREFKKIANMAGIEKSIHPHLFRHSFATYKINSGMPMPIIQHLMGHESPATTQIYAQLSEETVKYEYKKIS complement(2701708..2701839) hypothetical protein; CLD_2046 N/A MEIISGYIKFGKQISIFDKYMNNEKETNKSLKKNQDKEMETEK 2701850..2701863 attL N/A CTTTTTTATATTAT complement(2701931..2702980) PHAGE_Clostr_phiMMP02: hypothetical protein; CLD_2045; phage(gi414090433) 2e-44 MEYIKEVNINEAVVHILDNNSEEPVLNEYKLRLDDECYKYILKHIDKCLKDECLRYAKFNEEKNVVKDISQEYLNGQNDLLDVSKELARQLFILMKGNDNISSCDLMIVSISTEYGPMLAILKMDYVKNYIHVVDMVEDKVGIDIVPEFTGLPASAQKIQKCAFIKPIRENQEFNLMVIDKQKKIKTSEEYGSNYFINKYLGCSIIENERDTTKNFVQATEKWVKTNLNENADTSEKIIRTVDKLLKEKDTIDINEISNNIFGENSDAKLNYEGFIAEQGIKEKIDVDKEWVDKKFKRIRLKIDRDIDLYIDEESYHDESRFEVKRVGDGSINIIIKNVYNYMQKISGK complement(2703007..2703210) hypothetical protein; CLD_2044 N/A MVDVKALKMWSISISMLGGKSPKIKYLCGKCGSYNTTRISLDAVNAGNPYVVCAYCGEINNTKLTLG complement(2703224..2703418) hypothetical protein; CLD_2043 N/A MMKATPKFDKEFEKWVIDIETEDGEVIPVGHTIEESIGLFEICKWDSEEQAEDWIKARPEKFYI complement(2703456..2703641) hypothetical protein; CLD_2042 N/A MTIEELIKKLEKIEDKTLSIEVSTGSEGTNIGRFYGNLYRVSIKEDYKGKRVLLTGELEED complement(2703679..2704002) hypothetical protein; CLD_2041 N/A MKNKQLSFLEPIEKPVGKQKIYDATICDRCCCNKCKYSVEIYPFLDSKECKEIKEDSCFNCDECYYYGMDNESLSRNRVKFECDKFKMSNYYVELEAKIKRKNFKII complement(2704036..2704197) hypothetical protein; CLD_2040 N/A MNIKLWIKRVKCAMFCNKPFELLNYYEKIDKGIVGAVKCPKCGNEMFILNKRK complement(2704247..2704543) hypothetical protein; CLD_2039 N/A MKKSEITNSNLKKAIFVLLYDQFDIPDMDESCSDSSYVDYIIDALIEKNENRCPYKCYDCIGKCKDNMLNCANGLKLDCDKEIEEIWKDFIGIENDKD complement(2704584..2705336) hypothetical protein; CLD_2038 N/A MKLKNESEEVNMNNLENSIKDCITKEIEKGIIEKVIAEQLEKCIEKSISDMFGWNGEIKKVIENKVKSVMIPYLEDYDYSEYITKLDSVLIDVLKSSALDNKKILENFKELMTSEDIKEAIKLSDIFKQWTEYCKETIDKDNIDMDYEGGYITTRFEVEEVSNSWSSYKTYMVTFECEEDEELKFEFSIQAWKPTADSKYTSNYKNSCDLRSLRYLNDFEILMMRISEGYENIILDSEGDSEDTFIEYEE complement(2705368..2705556) hypothetical protein; CLD_2037 N/A MKKLNKLGLSQFECKRIMSVYDLEEVDEIIDQINKLKETDAFKKLEKACRRLVNFVREMQNN complement(2705582..2705881) hypothetical protein; CLD_2036 N/A MKVEITKRYCDICKKEIQWHDDSRTNEIIVKVVFGNEKGHCRDSIYETKEVCDECMEGMGFTVLPNSWELNKEKNNLNGKFKNIIRKIFNRELGGIKNK complement(2705894..2706202) hypothetical protein; CLD_2035 N/A MILKNSSKLGINNELLTLENLVDKLQEEVKELKDATEDKNNIHHVAEEAWDSLQMCVEVLDKLESEHNVNLKTSLNKHHKKIKKRGWKAKKMIIFQVFNDYH complement(2706225..2706938) PHAGE_Bacill_1: hypothetical protein BV1_gp03; CLD_2034; phage(gi155042921) 2e-29 MTSNICHICNGTGWEFDNETETYRRCECYEKEKLQRLWKKYGIDPKDIKKLNEYKPIDDTQISARDKAVKYIKNFEKIKNTKENGFGLFGQPGAGKTHILLSIGAALITKGIEVIYMPYVEVMRELKATAMDNEYYMKLSSSYIKAKVLIVDDLFKDKLKNGELVGELREADIKHLYPILNYRYLNNLPTLVSTECIPDILQKLDDAQCGRMLERCGDNIIVFQGYKYNYRMRKFTK complement(2706928..2707794) PHAGE_Strept_PH10: hypothetical protein PH10_gp11; CLD_2033; phage(gi238821328) 2e-41 MFVKIGVIIIAKKYYWLKLKEDFFRQKEIKKLRKIAGGDTYTIIYLKMMLLSLKDEGKLFFEGLEDSFIDEIALEIDEDLENVKVTIMFLIKCRLIEELTENEFLMTKAYESIGSETQSAERVRRFRQRKKALLSNGEVTKSNTEIDIEKEREIDIEKDKIKIDWNKILEAWNTLPEPIKSVRSITDKRKKKIKIRMKNLKLTQEDILKAIDKISKSNFCKGINKKGWTIEFDWLFKDDNNITKVLEDKYINKDGKYGDRENNSKDKSQYDFNRPYTGPSYSDQEIDF complement(2707832..2708104) PHAGE_Thermo_THSA_485A: hypothetical protein; CLD_2032; phage(gi397912646) 6e-06 MNENWCILAIAALYERPCTIEQAFEVFDKGKLTKNKKKSQEDIEDMVKFRNMGMTFEEITDIYCADKKTVCRLINSFKKKKIAPCQEHNN complement(2708121..2708303) hypothetical protein; CLD_2031 N/A MLRKLLKERGINLTKEEFAIVAEITTDDIKFNRVSFRKCTSLNYVLYIAIRSASIFKRCA complement(2708305..2708565) hypothetical protein; CLD_2030 N/A MNKKIKTTDLNLNVSTGTILYVDIDIFRFSYDQEIFNLTIKILDGENYEFFEEVDLPEDEAIVDHNDLKIFALNWIFKNVEVVKEI complement(2708577..2709377) PHAGE_Bacill_WBeta: putative antirepressor; CLD_2029; phage(gi85701411) 1e-24 MGKVVLNIKNGQTVVTEIQPVEVEGQRVLTTDQLSEVYEVDPIRIQQGFVRNKDKFQKEKHYFRLTGEELKEFKANYLKDSNLKYASELMLWTERGANRHCKILDTDKAWEQFDNLEETYFRAKEKNLPPMSIEDILIQNLQQMKDVKQQLNQVNYTALEAKHTSEENKEKLEEFPLFTIDSKELSRVANRVVVKFLGGKGTPAYKELKRKVYSDLYRQVWREFDVTSCAAIKRKDLEEAKKIISEYKLPRALANEIQILNNQVSF complement(2709477..2709593) hypothetical protein; CLD_2028 N/A MPEVIIIEPDITDEENQENWEKVQQVINLIYQEINKAE complement(2709631..2709753) hypothetical protein; CLD_2027 N/A MRRVKMNNLDVINRQLELIDKIDNLQKKRKEEKKNSTSLR complement(2709731..2709934) putative DNA-binding protein; CLD_2026 N/A MNLRQFRNSKGLQRKFVVSRINISGKHLNDIEAGRVNLTDKMASKLAIFYKLDIKKIKEMYEEGKNE 2710140..2710505 PHAGE_Clostr_PhiS63: gp26; CLD_2025; phage(gi388570671) 2e-06 MSKIFAEKLKEYRKELSEKRNKKVGQIQLAEELGISKGNIGNLEAGKRLPSKTVLMKLVDHSGKGMDYWLDGVEEYEAPNTLDLVLDKMIEEGLIKDTNIDKEAWDIITEAVLVEVERKLQ 2710517..2712031 PHAGE_Bacill_SPBc2: site-specific recombinase; CLD_2024; phage(gi9630126) 2e-55 MRICMYLRKSRADEELEKTLGEGETLSKHRKALLKFAKEKNLNIVEIKEEIVSGESLFFRPKMLELLKEIENKQYSGVLVMDMQRLGRGNMQDQGIILETFKKSNTKIITPMKTYDLSNDFDEEYSEFEAFMSRKELKMINRRMQGGRVRSVEDGNYIATNAPYGYDIHWINKARTLKPNQKESEIVKLIFKLYIEGNGAGTIAKHLNSLGYKTKFENSFNNSSIIFILKNPVYIGKITWKKKDIRKSKDPNKIKDTRTRDKSEWIVVDGKHDPIIDQITWKQAQEILNNRYHIPYKLVNGPANPLAGLIICATCKSKMVMRKLRGTDRILCKNNKCNNISNRFDAVEKSVVESLENYLKAYKVNLPELNEISNLKLYEQQISTLKKELKILNEQRLKLFDFLERGIYDEDTFLKRSKNLDERIEITNESLSNLNQIIAKENKAIKKEDIIKFEKVLDSYKSTADIRLKNELMKTLIFKIEYTKNKKGNDFKIKVFPKLKPLNI complement(2712037..2712471) PHAGE_Bacill_WBeta: putative RNA polymerase sigma subunit; CLD_2023; phage(gi85701416) 2e-07 MFFLSYLWDVLGSALFLTGYVTGNTSFPKPLSDEEEKYYLDRLKKGDALAKDILVERNLRLVAHIVKKYSYPGKDIDDLISIGTVGLIKAIDSFDNSKGTRLATYAARCIENEILMLIRNNKKTKGEVYLQDPIGVDKEGNEYP 2712598..2712611 attR N/A CTTTTTTATATTAT 2713482..2713493 attR N/A CTCTTATATTTT 2716412..2716423 attR N/A ATAAATTATTTA #### region 4 #### complement(3281503..3282525) PHAGE_Ralsto_phiRSA1: bacteriophage tail protein gpT; CLD_1512; phage(gi145708104) 3e-14 MIVSIAGIAKTFTVLSKLVGTINNVIGIFGKLKKAGGIFGLLKTIITSKTLLILVAIAAIGLIVYEVIKHWDKLKAYFIKFWNGTKKVFHNFWSWLQEFFKKWGPIILAILAPFLGIPLLIIQNWDRIKSAFSAILVHITNVGKKIGKFFEESAQGWKMLGEDIVGYVKKLGHRIIDGFVNGIEKRVKRVKDAATNLANTVKSGFKNPLKIHSPSRVFDEYGRFIGEGLIHGIDNQESAINNKFKGIANKIKGLGNVRPNFNGLNNMSLSGAYGGTYASPYGPNNMNKSMGLTQDIKMYVTIPNADKEGANKIANEFKQMTESSMKNVMTGLFMNDVLRD complement(3282543..3283067) phage-like membrane protein; CLD_1511 N/A MAVNVGEAVAHLTLDTSEFKKALNGAGKDLEIFVHKVEKEKTRIEKLQEALAKEAGTLSKIGKSMEKPSVAAQNLLKTGMKNTLAEEAKSKNPKKGPANIAKNNYDKIQKDIQASIKKVQDSFGQLQASVVKQLIPIFNDKLVPILNNKLIPAFTKIANKAIELMNSFNKLPIQ complement(3283252..3283476) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp21; CLD_1510; phage(gi304360683) 7e-05 MSVISISKEYRQRPSEIIGLTNDYEAFCFDEACVYILNEISKEDAREPKFIDGDRTNKTNNEDVIQWLNANNKS complement(3283454..3283870) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp20; CLD_1509; phage(gi304360682) 2e-29 MDLKVTNIEDLKKVAQGEVIQLPQFGQGIPFNARVKRVSLLNLVRKGILPNKLLGAAEELFYGKQNSKENVDLVEMTNVMYIMAENALIEPSIEELKNVGLELTDEQIVALFNYTQEGVNELDSFREESEDNERNINK complement(3283885..3284772) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp18; CLD_1508; phage(gi304360680) 8e-27 MTSGKTLVNVVKVNFIDEVTNTKHTIETSNEIDIEPINSKGKRDILRIKNKIYGINETDDIVIGYKLKMKDNLFNIETMALIDGGTIQYNKYCGTEVGIAVERHPFTMEIFTEEKDYSRTTGYVKFVYKHCKGKPAKYKIQDGKFLVSSYEAESIPFRNEKPVEIEFINKLEENDNGEKPGESTPIEDIGVEGGEVENKNPDVGVSITNRVVWSFSNQINQDDVNLENFIIKRKSDDSRVNGNVTIDDTKKIVTFVPDSLSIDTVYIAEAKEINKLDGSGKTTALSTEFKTIKIR complement(3284777..3285196) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp17; CLD_1507; phage(gi304360679) 7e-09 MSKFNYKVPGDCIQQDIIDNAVPETLWQKVYLCLKKLGYNVYAPGQKRNKCTESYVVIKENGVHALVGNISGYKLFDIIVYNPMDQYSTMEFYVENLKEALKKIQDLRPTGNETPSIIDYDVQAYTTSIEYQQFKSLRR complement(3285202..3285549) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp16; CLD_1506; phage(gi304360678) 7e-10 MSEFEVNIDSVIDGLSEFEMQSKTAISGYADIAAKKLEEDAKKNAPWKDQSGKDIETIKGGKQWKGDKCNIYISGNKDYYSSLELCNDKKYAILKPTIDKLSPQILKGMSNLFGK complement(3285554..3285919) hypothetical protein; CLD_1505 N/A MVNMNRGKISKNIYEHLEKKDLLREIKILRIGKNAFEEKLDEVYVCTIRGYYYRNNSNIITTSMEGLEFNNLYNDKLLITYNDISSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNRV complement(3285919..3286203) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp14; CLD_1504; phage(gi304360676) 3e-07 MRTPLEILKFNLQEKQYPYFEDKELELLLEINNNDVEKASYKGCILKAIADDGIEVADIKLQSNRAYWLTLAEHFKEEQKILKNQTSMERVDEY complement(3286708..3287229) PHAGE_Clostr_phi3626: Gp43 protein; CLD_1503; phage(gi20066006) 9e-17 MLDKKLYIKTEERLYRYFRSKKELSKLKNRVKHLSNRIEIIMDKIKNNDVTLEEESRSRTYDEIVQTSSNGTSYAERELVRQIERLEIELGEKIKKKGKVEYKIREIEEEISVMGDNLSSLNEENKKFIELKYGENKSVDWIAVEMFGRARSTAYRKKNELVEHVAQLNNLIV complement(3287342..3287662) hypothetical protein; CLD_1502 N/A MSIVLVKEIENKYFEEIESFREENAVLKILLKEYVKKSIDYEKLLKESINLLDKYQEELEFLRVAKNRWTDEVVKHYFTIKDLQKALDIVGKEIMIYELNKNNKEM complement(3287719..3288519) PHAGE_Bacill_IEBH: DNA replication protein DnaC; CLD_1501; phage(gi197261519) 8e-42 MDYNIAGENERVEICSVCGEAIEKITYIPGLNRYIKGPVMCKCKREALMAKEKEKINKEKQLRLKKIIKNSLIDEKFRNSKFKNWDFTKGNDKMYKIANKYTKKFENMKKESVGLLLYGSPGNGKTYTVACIANFLIEKMLPVICVNTDSLLNRIKDTYKKSGKEVEEDILRGLDNADLLIIDDLGTEQDTEWTRTKIYNILDSRYRNGLPLIITTNLSLIELKNRYEKRTYYRILEMCTPILNDGKNIREEKAKEKTEILKELLK complement(3288509..3289414) PHAGE_Lister_A500: gp45; CLD_1500; phage(gi157325004) 2e-45 MDKKESGDMLAEVKWIKITTNMFDDEKIKLIDAMPERDTVHYIWMRLLVQAGKTNANGYIFLNDNVPYTEEMLSTIFNRPLNSLRFALKVLRDFGMIQIQEDKLIRITNWSKHQNIEGMEKVRQQTRERVAKHRAKKKELLEETKRHGCKNNNNRKSIMLHETLSNGRDIDIEDIDIEIKEDRKSDIRKNLDKINESYFNTFYRQISATYLNQVLKVMAKEDYTDLLIYALDITKKREQEQGKIKGFKYTMSILESWINKGYKLPQDVKKNEISKKWREGEVYETSRRSFGEDLKKQGIGL complement(3289508..3289720) putative DNA-binding protein; CLD_1499 N/A MAVIKTKEYRRIRNLSISKLSYKSKIARSYITELEEGKYENPGLKVICNLCKTLKITPNELIDQELWRWW complement(3289782..3289991) PHAGE_Staphy_SpaA1: transcriptional regulator, pbsX; CLD_1498; phage(gi399498897) 3e-07 MTTAKKLKAYRCLKGAKQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTIDELFFKRNSKL 3290183..3290593 PHAGE_Clostr_CD119: RepR; putative repressor; CLD_1497; phage(gi90592681) 3e-14 MAEIKDRLKCERLRKDLNQTELAKFLNVSKQTVSNWENGNRIPDTLTLSKLADFFNCSVDYILGRSENRNGIISKANIDGSNYEFELDKSIFPNGITREQMINYIKELEERNKELEKEAEISRKLKEAGFDFNPDK