Definition Lactobacillus brevis ATCC 367, complete genome.
Accession NC_008497
Length 2,291,220
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 40 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1075756..1075770  attL    GGAGTTATTTATTCT  N/A  Click
2 complement(1088269..1089321)  PHAGE_Lactob_c5: putative endolysin; LVIS_1072; phage(gi418488198)  2e-20  Click
3 complement(1089321..1089839)  hypothetical protein; LVIS_1073  N/A  Click
4 complement(1089832..1090134)  hypothetical protein; LVIS_1074  N/A  Click
5 complement(1090131..1090517)  PHAGE_Lactob_8014_B1: hypothetical protein; LVIS_1075; phage(gi431809815)  2e-06  Click
6 complement(1090575..1090745)  PHAGE_Lactob_Lb338_1: hypothetical protein lb338_phage_125; LVIS_1076; phage(gi226377755)  1e-10  Click
7 complement(1090760..1090891)  hypothetical protein; LVIS_1077  N/A  Click
8 complement(1090904..1091356)  hypothetical protein; LVIS_1078  N/A  Click
9 complement(1091375..1091956)  hypothetical protein; LVIS_1079  N/A  Click
10 complement(1091958..1093754)  PHAGE_Lactob_KC5a: hypothetical protein; LVIS_1080; phage(gi90592630)  1e-13  Click
11 complement(1093756..1094364)  PHAGE_Deep_s_D6E: hypothetical protein; LVIS_1081; phage(gi423262344)  2e-16  Click
12 complement(1094354..1095517)  PHAGE_Deep_s_D6E: baseplate protein; LVIS_1082; phage(gi423262343)  1e-64  Click
13 complement(1095514..1095888)  PHAGE_Deep_s_D6E: hypothetical protein; LVIS_1083; phage(gi423262341)  9e-06  Click
14 complement(1095885..1096259)  PHAGE_Lister_B054: gp22; LVIS_1084; phage(gi157325306)  3e-07  Click
15 complement(1096256..1097215)  PHAGE_Deep_s_D6E: hypothetical protein; LVIS_1085; phage(gi423262340)  6e-31  Click
16 complement(1097208..1097594)  PHAGE_Deep_s_D6E: hypothetical protein; LVIS_1086; phage(gi423262339)  4e-15  Click
17 complement(1097608..1098909)  PHAGE_Lister_B054: gp19; LVIS_1087; phage(gi157325303)  3e-14  Click
18 complement(1098921..1104608)  PHAGE_Lactoc_bIL286: tail protein; LVIS_1088; phage(gi13095795)  2e-96  Click
19 complement(1104626..1104739)  hypothetical protein; LVIS_1089  N/A  Click
20 complement(1104846..1105472)  PHAGE_Lister_B054: gp16; LVIS_1090; phage(gi157325300)  4e-09  Click
21 complement(1105603..1106085)  PHAGE_Lister_B054: gp15; LVIS_1091; phage(gi157325299)  3e-18  Click
22 complement(1106103..1107254)  PHAGE_Deep_s_D6E: hypothetical protein; LVIS_1092; phage(gi423262335)  3e-13  Click
23 complement(1107272..1107760)  PHAGE_Lister_B054: gp13; LVIS_1093; phage(gi157325297)  2e-12  Click
24 complement(1107744..1108127)  PHAGE_Lister_B054: gp12; LVIS_1094; phage(gi157325296)  2e-07  Click
25 complement(1108146..1108445)  hypothetical protein; LVIS_1095  N/A  Click
26 complement(1108460..1108972)  PHAGE_Deep_s_D6E: hypothetical protein; LVIS_1096; phage(gi423262334)  2e-07  Click
27 complement(1108969..1109319)  hypothetical protein; LVIS_1097  N/A  Click
28 complement(1109492..1110613)  PHAGE_Strept_2972: head protein; LVIS_1098; phage(gi66391768)  2e-48  Click
29 complement(1110631..1111032)  hypothetical protein; LVIS_1099  N/A  Click
30 complement(1111044..1111697)  PHAGE_Staphy_StB27: scaffold protein; LVIS_1100; phage(gi431809709)  8e-18  Click
31 complement(1111891..1112826)  PHAGE_Strept_SMP: putative head morphogenesis protein; LVIS_1101; phage(gi119953779)  5e-15  Click
32 complement(1112747..1114270)  PHAGE_Lactoc_ul36: putative portal protein; LVIS_1102; phage(gi21716109)  4e-66  Click
33 complement(1114282..1115544)  PHAGE_Deep_s_D6E: large subunit terminase; LVIS_1103; phage(gi423262329)  4e-143  Click
34 1115691..1115705  attR    GGAGTTATTTATTCT  N/A  Click
35 1115744..1116331  PHAGE_Bacill_BtCS33: integrase; LVIS_1104; phage(gi392972759)  8e-24  Click
36 complement(1116338..1117096)  PHAGE_Deep_s_D6E: small subunit terminase; LVIS_1105; phage(gi423262328)  1e-30  Click
37 complement(1117128..1117310)  hypothetical protein; LVIS_1106  N/A  Click
38 complement(1117330..1117575)  hypothetical protein; LVIS_1107  N/A  Click
39 complement(1117587..1117913)  hypothetical protein; LVIS_1108  N/A  Click
40 complement(1118040..1118112)  tRNA  N/A  Click
41 complement(1118275..1118332)  tRNA  N/A  Click
42 complement(1118379..1118461)  tRNA  N/A  Click
43 complement(1119083..1119154)  hypothetical protein; LVIS_1112  N/A  Click
44 complement(1119340..1119795)  PHAGE_Lactob_phig1e: hypothetical protein phig1ep41; LVIS_1113; phage(gi23455797)  3e-19  Click
45 complement(1119889..1120212)  PHAGE_Entero_phiFL3A: hypothetical protein; LVIS_1114; phage(gi281416234)  2e-07  Click
Region 2, total : 31 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1115583..1115594  attL    ATTGTTTAACTT  N/A  Click
2 complement(1120242..1120499)  PHAGE_Lister_LP_125: hypothetical protein; LVIS_1115; phage(gi525972574)  4e-11  Click
3 complement(1120640..1120939)  hypothetical protein; LVIS_1116  N/A  Click
4 complement(1120973..1121317)  hypothetical protein; LVIS_1117  N/A  Click
5 complement(1121442..1121696)  hypothetical protein; LVIS_1118  N/A  Click
6 complement(1121697..1121954)  hypothetical protein; LVIS_1119  N/A  Click
7 complement(1121969..1122166)  hypothetical protein; LVIS_1120  N/A  Click
8 complement(1122180..1122641)  PHAGE_Lactoc_bIL286: Orf19; LVIS_1121; phage(gi13095762)  3e-06  Click
9 complement(1122638..1122883)  hypothetical protein; LVIS_1122  N/A  Click
10 complement(1123052..1123249)  hypothetical protein; LVIS_1123  N/A  Click
11 complement(1123261..1123476)  hypothetical protein; LVIS_1124  N/A  Click
12 complement(1123469..1123888)  hypothetical protein; LVIS_1125  N/A  Click
13 complement(1123900..1124601)  PHAGE_Staphy_187: ORF020; LVIS_1126; phage(gi66395235)  1e-28  Click
14 complement(1124602..1125015)  hypothetical protein; LVIS_1127  N/A  Click
15 complement(1125008..1126252)  PHAGE_Lactob_Lc_Nu: putative DnaB-like helicase; LVIS_1128; phage(gi78000024)  1e-60  Click
16 complement(1126253..1127005)  PHAGE_Staphy_77: 77ORF016; LVIS_1129; phage(gi41189531)  5e-36  Click
17 complement(1127006..1127203)  hypothetical protein; LVIS_1130  N/A  Click
18 complement(1127273..1127857)  PHAGE_Lactob_Sha1: hypothetical protein; LVIS_1131; phage(gi418489845)  7e-33  Click
19 complement(1127854..1128552)  PHAGE_Lactob_Sha1: phage nucleotide-binding protein; LVIS_1132; phage(gi418489844)  9e-90  Click
20 complement(1128553..1129446)  PHAGE_Entero_phiEf11: putative replication protein; LVIS_1133; phage(gi282598768)  9e-35  Click
21 complement(1129439..1129618)  hypothetical protein; LVIS_1134  N/A  Click
22 complement(1129774..1129896)  hypothetical protein; LVIS_1135  N/A  Click
23 complement(1129945..1130223)  hypothetical protein; LVIS_1136  N/A  Click
24 complement(1130312..1130566)  hypothetical protein; LVIS_1137  N/A  Click
25 complement(1130579..1130776)  PHAGE_Brocho_BL3: gp36; LVIS_1138; phage(gi327409428)  8e-05  Click
26 complement(1130789..1131571)  PHAGE_Brocho_BL3: gp34; LVIS_1139; phage(gi327409426)  6e-55  Click
27 complement(1131584..1131802)  hypothetical protein; LVIS_1140  N/A  Click
28 1132061..1132477  PHAGE_Lactob_phiadh: Rad protein; LVIS_1141; phage(gi9633005)  5e-11  Click
29 1133019..1133903  PHAGE_Lactob_A2: hypothetical protein A2p22; LVIS_1143; phage(gi22296544)  1e-05  Click
30 1133963..1134712  PHAGE_Brocho_BL3: gp30; LVIS_1144; phage(gi327409422)  6e-05  Click
31 1134782..1135543  PHAGE_Lactob_LF1: hypothetical protein; LVIS_1145; phage(gi418489416)  1e-20  Click
32 1135535..1135546  attR    ATTGTTTAACTT  N/A  Click
33 1135879..1137333  PHAGE_Strept_pyogenes_315_1: putative integrase; LVIS_1146; phage(gi28876146)  6e-18  Click