gi|116332681|ref|NC_008497.1| Lactobacillus brevis ATCC 367, complete genome. [asmbl_id: NC_008497].2291220, gc%: 46.22% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 1075756..1075770 attL N/A GGAGTTATTTATTCT complement(1088269..1089321) PHAGE_Lactob_c5: putative endolysin; LVIS_1072; phage(gi418488198) 2e-20 MPHYDVVDTSNNNGIMTVANWRSMKKYGVKAMIAKLSEGTYFTDQTAKPSIRNAITAGLHVNGYHFARFTTETGAKAEAQMAARSALKAGLGKSSVIVLDFEATNSGWNQNSKIVKAWINEVHRMGYPKTDVYTMGSWINSVPLNNSGRGGWVANYPYNPSGFKLYTGYNGWQWTSSMHFPGCYGGFDVSQMYSNYYYGTTTHVAKPKKAIYYRYNPKMIYARTPINRYKDVAFKHKVDNFPAGTVFAIAKVINYGKITRFQLANGYYITSNQTNVNRLYYSVDGGVKRVKSVRGTHRYKDKALKHVVDWQPAETEFDVAKIVKYGDTTRIQLANGLFISGNKKINKFVK complement(1089321..1089839) hypothetical protein; LVIS_1073 N/A MNEFTKIIKLLNDTGILGVLIFALVGWFTRINPALKTKIAANKSATQREVLSMLDTLAFSAVNKAATNYEMPGEEKREQAIADVTGQMKVFGHDSLAPAIISAAIEKAYQSMTTTDTKAQSKQVEYNAALADTEQAFADKQAQLDKQAATVPADPAPLNVPEGTATTEGDAK complement(1089832..1090134) hypothetical protein; LVIS_1074 N/A MKDYAGYIFTAIVSVLASWFTLKGTRSSSRAATETAYAQSMPEMIGKVQDLLEQLESKNGKIAELTSQVESQSHTIDALTQQVGQMQRQINKLTGGNKHE complement(1090131..1090517) PHAGE_Lactob_8014_B1: hypothetical protein; LVIS_1075; phage(gi431809815) 2e-06 MQSNVRKNRFLLVTALETILLGAYFIANSFRFGAPDLFNTVASHIDDPPFAAADIVVGTVILVAALYDIRPLIKWCYVAATCVWTLYAMAFLLQNIEMMGHPFAHLDCWLMFAVAGRTILEAWAGDAN complement(1090575..1090745) PHAGE_Lactob_Lb338_1: hypothetical protein lb338_phage_125; LVIS_1076; phage(gi226377755) 1e-10 MLNFKFSALAAIYAANVLDGGRTIEEVPAYLQDDVKNVLGSAKNSTSTDSSSTPVA complement(1090760..1090891) hypothetical protein; LVIS_1077 N/A MEFSALAQIYAQAIIDGTRTIEAVPVPFRSDTQAALTQLQSNK complement(1090904..1091356) hypothetical protein; LVIS_1078 N/A MPIYYVKTDSDNKFPDKDTTPVLEPADDLRAVNISTTSVQYFLRYWWMYAFKGDSSQEVTAPGNLPPLDNDYLQELIDQQGKQIEQQAKNIESLKTENKSLKSANELTQQGLMEAVDYLSSQLSPASTTTGADSTATSSAAPASSAASES complement(1091375..1091956) hypothetical protein; LVIS_1079 N/A MGIYIQGGKKVGGMYMADGRGNATKIGGMYYADGKGNAKKIYYSFLPAGTILYDGSSQADWDKLYITGPQQYQLTKPLEKLKNGIKVTYGDAYYGGVPGYNADYNQGFIKNDHTIKKLYPISQLNNKSIRLNSMDILGRVGNTAGDNEDGEIKFNLTSSVFSYKSPDNLWLAWTATDEKQPREYAPILKIEAY complement(1091958..1093754) PHAGE_Lactob_KC5a: hypothetical protein; LVIS_1080; phage(gi90592630) 1e-13 MADSSRTIMTDAGFALETRVRADETKMQFTRAAISTDDHFSDTDDALAKLTELYNIQQDGKVTAVQVINTTTVYVQVDVNQAESKADYQMRSAALYAKDDDGTEVLYGVTVLQDPVFVHKDADGSYLGFGINTTVGKASNVVVVVDPANMVTQQVFESTMKNYYTKAEVDAKFVTDDDFASKLPKNIATTDAANTFVKSQTLAGGATDGKGNAYATTKDVATGLNNGLSTKVNTTDMRKPANDVLGLEDIKSSVLPSGTDLYTLINTSGQPLSYFVPTYTSAQSMVNKPTTKLSAFKLNTDSIGDSTSPSYNYTFLTLKDDSDGSIYEALIHTDGSGAIIVTRPWYKVADDSTVVHSTDMRKPASDVAGIEEVNAKQDKIGYTPADDSKVVHSTVTQLTSTDMNTVLTAGFYSLNSGTNGMPNADAWTIYQVIPLSSVNGVQVAYETNNAILGMRSWNSGSGKIIFTSWVQFADDSKVAHLAGTNNFDTVPTVNNNPLLLASSLPSDLARTGQDANFTAKLQQNGQDVALANNTIARNPNTGVVSEPVDFTKLTVNGGKSVATSDDLNNYYHANASDAAALAAAKSATVPGIFWFEEV complement(1093756..1094364) PHAGE_Deep_s_D6E: hypothetical protein; LVIS_1081; phage(gi423262344) 2e-16 MTDKAYTPEYNLEDLLNELPVSLAYEEGSNNAKLLSLYSDGMEDTLVTLQKMDEWHSIDIAEGEALDMIGNDRGVPRNGYDDEFYRFLIKSKQLQRQTDGTYNSLIKLIAESLGAKYSEINVDPVDDEPNAIQVTNVPATYIDSQRKEKLVLDQIRSSVAAGIRVAGIGFQKTVKSTLYYAMQFQTTQVIESTMSVPQLKEG complement(1094354..1095517) PHAGE_Deep_s_D6E: baseplate protein; LVIS_1082; phage(gi423262343) 1e-64 MTALDKTGLKILNFQQLLNQLTAKTQELFGDDVNTDQNSALGMYIRVISWLQNIVNQDLEAVYYSSFVDQAEGVSLDRLGSNYSVTRNPAQAATVMLDFTGTTGTVIPEETVYTTESGVEFEMVDTVTLDDSGKGSGEAVCTALDETGNVAPNTISVQGENIAGIESVTNPTQASGGTEIETDDAYRQRIHLSMESQPGPTYYGLYTGLYALPGVEQVQIVPNLTMETDSYGNPPKSLHFYVRGGREDDVAQAILDNIAAGIQTVGKIKEAVKDIGGHTHDVFFDTATVVPIYVNMSLKTSDDFNSETSPVEIVQAIKDYLSGLIMGDKVVFTKLYQAIYNISGVEYAQVTLGRDKSAMGMADIQLDQFETAVVANDSDVEVTVDDG complement(1095514..1095888) PHAGE_Deep_s_D6E: hypothetical protein; LVIS_1083; phage(gi423262341) 9e-06 MRDFKLDKNGDVIIDDGDIAMISDNEEISQRIATTLRTRLNEFEPVDEPMGLTRENALGKGYNQDFLQEDIEDAISTQVDENIDVQEINFTKSDADRSLSVEVKYMLPNGDVETVQTNLGDDDQ complement(1095885..1096259) PHAGE_Lister_B054: gp22; LVIS_1084; phage(gi157325306) 3e-07 MTKIGKLQEHFHELMEKTGDKSGYSINVSNFAKVVSYDSTHHTADVQPQVDDEGGQDEVGVIVGCPVLMNCYAFDGGKSMKNGATVFIVFNDRDLDNFDGGKYTKASDRIHSVNDAVVVGVYEG complement(1096256..1097215) PHAGE_Deep_s_D6E: hypothetical protein; LVIS_1085; phage(gi423262340) 6e-31 MAKYLYGRRVKLVLLTPHESVTFDYKQTETHSMGIQFNVPFSDSSTPPTCTVTIMNLSAKHRKLFKKGYEVKLYAGYAEDGVGLLSAGVIRAISPFTSDGTNNTFSFTYREGQEYSKLLSSAEKANKKADEARKKKAKVIGKKAAAGLPKIKKHSALSFGKNTAASTIIRRIASDAGITLSKVYLAKPKKYKKGYAAHGKPITNIKAIAKACGSKVYYRRGSIVIDDLSKVKGHNEHILVTEHVKGRHGGTGLIQYPTTDSDSMAKHKTWTVTSLLRYQVSTGSVVTVENRFLKGTFRVKSGEHVCDDSAFTTAMEVYV complement(1097208..1097594) PHAGE_Deep_s_D6E: hypothetical protein; LVIS_1086; phage(gi423262339) 4e-15 MPVRPYIDFDVDDLPETFEQDLDGTTYLISLTYNDEGDFFVFTLMEDDETPIVSEKLILNQPLFQELPPDERLPTTPLVPMDESGQAKRVSIDNFMDTVFLCEDVLPNDGTDIGELPIDGDWTGGLDG complement(1097608..1098909) PHAGE_Lister_B054: gp19; LVIS_1087; phage(gi157325303) 3e-14 MTVYTKTWKKKKKAVTDSKNAYESLSATQNKQISQAKNYQATITTAQSNIQAINDSLAYYYKSEKTKGKNGKTTTKKVKVKRKTPAKPSKTQQAKLAEYQAQAKSASSKLSTLKKSPSYKKASSKLKKAKSTAKQSKAAYDKYMKKRHATALKRVAQQRQENYKRFMAPHASLHATNSLTGLEVFLFATDESETNDSTATTYPIDKDDPVVDHVQRTAKTITINGYLYDQKAGKRLWSGTKDDVSGSGLPKKSCRQQYNNLKKWQFDGTELVYKSNAANDVGKRVMNKIYYKHLFMTNLTKTLDAPLLGMMKISMTFQFAYKAKVTTTSKGTKNNKGKKTTGGKYVGAKYITVKKGMTYWGLAKKYGTTVAQLRKWNGSEKVTMYPGKNGKYPVKLRVTQGMSTAALSKSLVKNKASTSAASTLSKIAKQLSK complement(1098921..1104608) PHAGE_Lactoc_bIL286: tail protein; LVIS_1088; phage(gi13095795) 2e-96 MAMRKSFIEIGYKVNKSGLTEAKTAVDKLIRSQEKMLNNLDAYDQRNRKIAASQQSVNSELQKTAAYQSQTAKEQAKVTDSVVKTRAEQRKLSEAEGKTRQKAVDTGDSIVRSNEKSARAVNRTRRSTEQASTSFDKLHGAGSRLVNMGSAISMAMLPVAAAFKKSAEEATNLENKYTTIRNLLHTGGESAGASAAETKQMEKDNNQFALQYGVSPVDMSKGGEELIRRGYSGSQELASHKYFLQAARASGDDYNSVVGYGAPALEQFGYKTKAGDSQKKMAAYTKTVLNQMAYGADLSATDFTGIGNALRYAGATAHSGNQSLSGTIGAIGVLSNNGQDGTVAGTGLRKDINSLLSPTSGPNGQGVAALKSIGLTPDDLRDSHDNLLSLDKAFELLNSHMKGMTDTQRATVFHGLFGATGQESALILSKNVEQMKSLTGQVQNAEKQGKGKGYIADLAQKNMKSWKNQIEVFKQYLNVMGLGFTKTVLPGFTHMLTDTNHVLKALIKLPEPVKDLTGHVVALGSAMGVAYAGSKLLRKGLDWMGGSGSRKVGRQTQLVQDVAQDAADVSGYSVPRGGTGTRSGSTHFKPSALSRMSGLTKLTIAGVGLDVGTEAVSAFKEGIGTKKGGQDLWGAAGKTTGAAIGGVLTGGNPVGIMIGEQMGKEFTKIVKASDFVKPDNHPDNKHNAHKKVDPNHTHSLHEGGENTWQDDASIAGTMAGNGVSKLRDRQRPQKATNPYSGLSSQTSDFLRSTRKQVQQANSEYLSIMTTGSKKAIAQNKNTYTSLLTSVKSYSAKQRESSDSNINYLKKIGAISSAEQAKELQKNKNGDNKRLSAVRNTVTQIEKAEKTGSSNRMALVAKLNGQLLRLTDAGANKQKSIYKKLREGVTSLTSKQYSSVMKQSRQARTQTVADAKKQYESQKESATKSYYKTLSSAKATYGVHSKMYAKIKTYADKQYTDTTNAAHQQYKDTVKWANKSEKAVEKAAANAAGGIDGIMGVMSDNITIMGKQLAKAIGGTYSKPVSNEQAIKNNTQPGAQLNKGAQKLRNKTTVLKSDQSAPKMPNAFAGHATGGPIRATQMAMVNEAGTEVAYNPRTGKFRLLGNGPAFTKLFAGEHVINAKDTRKLFSGGLGTGKTLKGYASGTTSLKGSIVGGSFKTKGFGNPLGSAEKSTKTSMGKISKTVTGGYDKATKKSSKSIKKFGSQSTRDWKEIHGDTKRYTGRIHKETITDYDQLQKGADKQLTQMKSAQLATMSKIHSGMNSETKAIESDFNSIMGKLPGDAKDAMKGSITSLNGGFTAIDSALSQFGGNKSVLKPIHYAQGSRGPIDNDQLAVLNDANSGPRQELVARGQQLLKPVGDNVAVHLRKGDEVFNGDQVERAKPYLPHFKKGTGASDSKLKSLAKANAANPGKAFSSEFTANAKSTGSTLQKGVTNVANTGSKKVGVPWSGAMWGLIQDTIEGGTAAGGKWIHTPGLALTNGFGAARSFGSHDGNDFSGPLGSAILAMHGGKVVQIGRPGHGWPYSQLGDIIELDSDDGYHQIYQEFGGMNNIKVAVGDVVKTGQRIATLGHLNGAGSGAHVHVGLSHGSVWDHGGSSTKGWLDITKMRGGSDGSSKLKSSSKPKANSALTKLVKSQLGSSAIKWIEKNLQDDIGSADVGALGGSVASRARTLAKAIKSMYGPATKAGIAAVLGNWEFESGLNPGAINPGGGASGLGQWLGGRKSALINFAKKNGGNWKSAGTQLAFALKGDGSDSSVLKSVLSGTGSVASLAAKFSSQWERGGYTAQHVAGARKIEAALGTGGQAQIGKNTLVGEHGPELVNFDRPATIRSADATRQLANKAGAKSKPSIQNTFHIDLKIEVKNGDAKEIAKNVKSALRDELDNLFSTELENLDY complement(1104626..1104739) hypothetical protein; LVIS_1089 N/A MTTDELMVANALVDEIEKQRDIRMNNAIVHALNPGDN complement(1104846..1105472) PHAGE_Lister_B054: gp16; LVIS_1090; phage(gi157325300) 4e-09 MTEKDEAQATNTAAKTTTRKKATPKKKNYSKTMKQETFTAESGNEYLFTYPGTFFVQQKVVDASMVNGFQDKVLLYEALMKNILEGDYDWDYFDKQIKDEDKTNSVTAEDHDGNEVEYKLKHPGLKRQYSMVEESRTVNGSIAMAEFNKQLMQHVIVSPNIKFDYWDHHDGYQKIMEEGNVFLGTVGSESDFNEVMEAASDFVNRMFR complement(1105603..1106085) PHAGE_Lister_B054: gp15; LVIS_1091; phage(gi157325299) 3e-18 MAVGNAVDDFTGRNSIDIGEGRTLNLYKAKDVSITITRADGSTVILRNFQDGDMVTPQKTNNKVDAMSDPQASAAASVTYDAMGTIQTTVQQGSPTNNLLSELYNTDEVFGFHIAYGDEKTGGDHCMIQKAPDAPFGKSVPTRAWTAQVFDYKYDGDANA complement(1106103..1107254) PHAGE_Deep_s_D6E: hypothetical protein; LVIS_1092; phage(gi423262335) 3e-13 MPVIPKITDVFVTIDITHPQTTIGLKNSNIFVKGDKESYKEYTYLGAVEADYPADTSVYKIAEQQFAQSPAPELVAVTTFTGDSTVKAQAPAPSGVTADATSDGATIKATPVTINEPGDDVPTTGIAKAGFDYFYNNWEFAILADYNKDDALALSNLIEHGGYDAKGYHILFLQFGEDNKNDATEFAANSRTWCFYHTDTDELYAAALAAAGAQGTIGQVSWKFVSDLANVTPETLPASDILALEKLGLICYVHKGNNDNQTDDKNAAGYYIDEVHGRDQIKATVEGNLQNTLNSAGKTPFDSVGLGMIAASLDSSMSLSYNAGIIATDPDTGKPMYSTHVPSVKEVGRFAIASRVLKDTTFGYTPSSAINTVYVHGNEQQWV complement(1107272..1107760) PHAGE_Lister_B054: gp13; LVIS_1093; phage(gi157325297) 2e-12 MEKPFDWKTLMAKINELIKQETGMDCIVEGGMGPQPPYPFFTYQVRPYIPIDITDNVDREEFEAEIDFMCHSQSANEAYTLGNQLRKLFETQSMDYLGDENDFGVVDTGEVESSDNVITVQVERRTEFTVRLRLLDTFKDKINTIGDIGINGANLSDKDKYK complement(1107744..1108127) PHAGE_Lister_B054: gp12; LVIS_1094; phage(gi157325296) 2e-07 MFDFDDMIDRWGIPLEIEMGGGNDGGHYDESGEWVADKAVPLKVNEPLLPPGTNASPGTYYTGNRGGMLDVWDMDWYSKQPKIADQTEVKDLERGITYRVAKKSDYQPYAGITIYNLEAVTTNGKTV complement(1108146..1108445) hypothetical protein; LVIS_1095 N/A MADTSSLTLNVYKKGDLKTVIATGTDTDAKAIVKGLAPGTVVPDGDYVATHTDPAGTLTESDAKDVPGWTVPKQKAPAPTNLVVTPTADGATIAAGTTE complement(1108460..1108972) PHAGE_Deep_s_D6E: hypothetical protein; LVIS_1096; phage(gi423262334) 2e-07 MSEDEYNYIDKIEREIDVFNSMQIEVGVLHDDFLQMIAVVNNDGAVIRAKNVPYLVIPLMKDGIRTYVKKKSVSIPARKFMERTVTRHEGRWQTLAVQQITKLMNGDGSAMMALHMIGHIAVEQMKSEIVRFKVPHNAPLTVANKGFDDPLIDTGALRDAIDYRIIPKLI complement(1108969..1109319) hypothetical protein; LVIS_1097 N/A MTIDVSTVQGMDQKFAKLDPDVIQSWIDLAQLVVAMSGLPEQPENVMPHGWALMAAHIGTQIMRQGNNKSSQTMGPLTESFFDVSSLGSDMFLKLYNDLLKAWGLAPIGKNEVHFY complement(1109492..1110613) PHAGE_Strept_2972: head protein; LVIS_1098; phage(gi66391768) 2e-48 MNKSIFDDINSTNIGSYWTTLSQQMDPYLWETLMPNSKQIASDFVFYRGMSNAPKPLAPSAFGVPAIMRKRSGFDRVSDHTRYFKEGYYIDEAIRQQLLRVGANATQAEKDMINNHIFQDSMELLKGAQLTREIMRNQIIQTGKINVIGNGQTITADYQMKASHRVVNDKAWGTTGSTPFEDIQKARDLVGDDSDQVITRAVMNKATFNALMSDTNVKSTMLYDNGKLANVTIPQSELLNFLVTNYGLTVQIYDKRYMDIDGTKKKWIPDGRVIFLPDGELGKTIMSTTPEEADLAAASDVDMTLVDNGVAITTMLDSDPVNKKINVSQEVMPSFPQIDGIYILDAFAKTGTDPLATTPTAPASTTTTTDPKA complement(1110631..1111032) hypothetical protein; LVIS_1099 N/A MTKYEHYVSPDQVMGFIREKVAFGALIGDTGVIADANGHKVIPAGTPVGGDTSMLDDENAILAVATDATKGTVQGILEFPVDVTAGTADGTVIDNGYINRLRLPENVTISKDMEKALHDKTIGGKVIFISRNK complement(1111044..1111697) PHAGE_Staphy_StB27: scaffold protein; LVIS_1100; phage(gi431809709) 8e-18 MKKFDLMPLNLQFFAEPDDSGGDGSGTGGNGPQDGQAQDNSGGQGEGNQGGSPKPKGDEPKYTDEQVNEIINKKFAKWQTEQAAKVEEAKKLADMNASQKKDYELEKANKAAAEAKAQVARYEMTATARKMASDADMTLTDEDLDHLVTEDADSTKANMDWLNGLKTRISAGVKAEFLKGNPPKAGGEPLGGKTGTYGAQLAKQSGSKKDPYFKTTN complement(1111891..1112826) PHAGE_Strept_SMP: putative head morphogenesis protein; LVIS_1101; phage(gi119953779) 5e-15 MPLTLNQEKQRIQQLINLDDQTDQQSSQYTAECLAFIQTHLMAFYERYADDEGISLTQVKQRVSKWDMGQWKQAISQMGDVSDWPDDAKQRMTIAGFVAGIDRSHLLDAIISLGVIKMTVSNQKNITHRLQLDGKTEARRMGDFFDLTSKQSKKVTSIITDPETTKIWSQNLWVDSDKIAGDVQYLVNQHLKHGMSLNDLNDILASHANPKQFKPGQSAADRIQQMEFNARRIVRTESARLKDEVNMTTYRMKGITKVDWVCEPGACLKCQGIEELGPYSVNGAPGIPDDSHPNCRCSKIPHIENLNRSYF complement(1112747..1114270) PHAGE_Lactoc_ul36: putative portal protein; LVIS_1102; phage(gi21716109) 4e-66 MALEIDVPELENKVLNNAQITHNGTFIFPADEDITTGDLVSLIDYHRLHIRTQYLKDRKYYEGDHDIMHKASKAPYKPDNRLVINFPRKAVTSFNGFFIGTPVKIDSTDKKADDYISTWTNVNNFEDVNSEVSKEASMYGRAYYFVYQDEQGNPCVVPSSPLDTFLIYDDTIARNVKYGVHYSYNVKDELMVSLMSVGQDREFVMNGKSDNYLDQVGVYALPYPIVPIIEAVENEERLSLCHDIVTLIDALDKAMSEKANDVDYFADAYMKIINAYLPEEEVKKFNQHLRDERMVVVNGADNGAEADTQVDFMEKPSADETQEHLVDRLVDYIYQIANVVNLNDEAFAGNPAGVTLKLKYQPMKDMADVKANKFKKSLRDVFRCVFSVVPGMNPDVWQDLTFRFTQSTPQNLLELAQAYSYFYGKISTKLLLQQMPFVDDPDEAMAEFKKENQDTQQQTGGMVQQILGNMTDQQKQKGGVGNAANAQSGKATNSATNQFGRPNGPTK complement(1114282..1115544) PHAGE_Deep_s_D6E: large subunit terminase; LVIS_1103; phage(gi423262329) 4e-143 MNWWLDPRIFEADNSELAMVLHPEWLNRRDVETIICDGSVRAGKTLIMSMSYVLWSMTNYNEEQFGIAGKTIGSLRRNVIRPLMRMLRGRGYEVKDKRADNLLVISHNGVTNYYYLFGGKDEGSQDLVQGITVAGFFFDEVALMPESFVNQATARASVDGAKFWFNCNPAGPYHWFKLEWLDQLDQHKAIHIHFTMKDNPSLSPETIDRYERMYTGVFYQRFILGQWVLSDGIIYDNFDKNKMVVKNPQGTARKYAVSIDYGTLNPTVFLMWGLYGDTWHLTKMYYYDGRHKHKQKTDEEYSAELDRFEDGLNPVEIIDPSAASFITLRRRGGHHVIKADNDVLDGIRKTGMAMNTGKIVFSPDLADLFKEFASYVWDEKAAEHGEDKPVKQHDHAMDAMRYFVMYMIGRQPTIQTFKLG 1115691..1115705 attR N/A GGAGTTATTTATTCT 1115744..1116331 PHAGE_Bacill_BtCS33: integrase; LVIS_1104; phage(gi392972759) 8e-24 MKQNVLPIKDSNVLIQVQQTLLDSFRAGRRNYTIFQMGKATLLRVSDVLALRYDDVFDSDSNARRNAFIHDKKTGKANTLYLKPVINDLLDYREWLNSKHIESEWLFPSSSDPTRHINEKQFYKVMARVGDLLGLDYLGTHTMRKTGAYRVYVQSHYNIGLVMTLLNHSSEAMTLAYLGLDQVSRERMLDNIDFG complement(1116338..1117096) PHAGE_Deep_s_D6E: small subunit terminase; LVIS_1105; phage(gi423262328) 1e-30 MTDKEQAYQDYMSGMKYKDIASKLGISINTIKSWKKRHNWQRGAPPATKKEKHQKNAPQVAPPAIDQLDSNIQLTDKQKMFCVYYLTRFNATWAYMKAYDVTYNTAMVNGNRLLRNAYIKQQLAELKKAQETELYINATDILNEYVKQATSNLGDYLKYDVQEIVDKKHKDVHGNYERYYSVQIKPEDMDKVDMSLVKSFHRGKDGLVIELYDKQKAMQVLLDRLPEAKLTSEQKDSFLNAIIAAKKGKEKE complement(1117128..1117310) hypothetical protein; LVIS_1106 N/A MNITRKPAASMKGEELLTQCAYVNGVLERFMKSNSDDTFYNGLLQYWDSLKREILKRMSR complement(1117330..1117575) hypothetical protein; LVIS_1107 N/A MKLTIHKQLGDTAIDTDVEGSIDDCLKVIDHLDAIKDNMQKADEVSSKIKDEMNQYLWQDRNDIQREFQRNIDSGKLTINW complement(1117587..1117913) hypothetical protein; LVIS_1108 N/A MTDELLGIYRGKNTKILLDGDAVHNFVPVPENMFDEVEGGIILHLLYTSPVLKHFNPKKFKAIICDENATVVTKMKIEKFKMLPFSIGASVPTVDVMLYGEPHTTFTD complement(1118040..1118112) tRNA N/A TGCGCGGTTTAGGAGTGGTTACCTATCTGGTCTCATAAACCAGTACACGTTGGTTCGAATCCAACCTGCGCAA complement(1118275..1118332) tRNA N/A ACGTGCATAGCTCAACGGCAGAGCAAAGAAGATACGGGTTCGACTCCCGTTGCACGTA complement(1118379..1118461) tRNA N/A GCCGGAACTGCGAAGATGGATAATCGCGACGGACTGTAAAACAGTTCTCATTGAGTGAGTAGGTTCGAACCCTACTTCCGGCA complement(1119083..1119154) hypothetical protein; LVIS_1112 N/A MMVVQAMVIIKTSVEGVKLETNR complement(1119340..1119795) PHAGE_Lactob_phig1e: hypothetical protein phig1ep41; LVIS_1113; phage(gi23455797) 3e-19 MMEIDFSNTSMSDVFPKIDKQATCHKVASFLKWTLPRMVLIAGKSLTDLRSPNYDGMPKAPASGNSNDARIVQKMYAQEVIKQTIEAIGKCDKECREILDMLYLQDYTDTMCYLDLGYSESTYSHSKKPKALLQFADVYLMEDLRVPAAES complement(1119889..1120212) PHAGE_Entero_phiFL3A: hypothetical protein; LVIS_1114; phage(gi281416234) 2e-07 MIDMRIGEYHITSEPRNYIVSLAKLSDDGTPKTVMTKAGEIFSERALGYYNSLPQALQAIAKDMMIRGDDRVTSVEQYVQKAKSVDVALNHAVYEHGLELEKQSQNI #### region 2 #### 1115583..1115594 attL N/A ATTGTTTAACTT complement(1120242..1120499) PHAGE_Lister_LP_125: hypothetical protein; LVIS_1115; phage(gi525972574) 4e-11 MDIKKVVAVMAVKTNTKDKVGNARITRNGDLFSLDNTPEKEVEFYSETDFDEPKRKNFEDLIRDLLSDGYKPEKNVTIHFLTEYK complement(1120640..1120939) hypothetical protein; LVIS_1116 N/A MKTTEFVQAIRKMAFGIDRVTCFGEGIIYRIWVPKNQYDSVKVAMIWQDKKQKIIEPEGYRAIKDYLSALEESDLLGIISDYMATPIDERGPLDSEADE complement(1120973..1121317) hypothetical protein; LVIS_1117 N/A MKIGECISLKTHFKVIKITEQLGDEVKKSFETARKQDESSSDSNPRNTWKMIYKFHGIVWNDVFGFYFLANYGTENQRRQQTIMLNDRIIESPLFDEQFLLSEKEYQRYFATVI complement(1121442..1121696) hypothetical protein; LVIS_1118 N/A MASKSDFEKVTAYLFVLSVGVGLYPMQIIGEFMRDVNSKGEVNQPMDIGVPDEVKEIYGSWTEKEESAFLIFFGRACMNELEEK complement(1121697..1121954) hypothetical protein; LVIS_1119 N/A MANEIKDNSITVKGNVLNSTEKTVNKGQVIELKVRVPADQFDGKRDAFAQVLEGNSIMTFTPNQTELDTDTDGEDNPDQTELEVD complement(1121969..1122166) hypothetical protein; LVIS_1120 N/A MNENQKVFRRFVLRSFEDHHEDMTRALGWCQLHFYSLLKVERDAIQQLSSRERNAVISEILLANK complement(1122180..1122641) PHAGE_Lactoc_bIL286: Orf19; LVIS_1121; phage(gi13095762) 3e-06 MKSPTALNKRGTKVRLDGYVFDSQKEADFYMRFVRDSGLRYTIHPKYVLTPLTELGQIKVSQISYKPDFVIYKDGKIAHVYDVKNSFGVYGIDGSVKLRFKLFLLSQGIPVEAVVVRKHDFKVIAQGITKQRKPTHPLVCTNLQYDWIEATSL complement(1122638..1122883) hypothetical protein; LVIS_1122 N/A MEIIDKGSHALVTEYSVGDVIRMDNSVCVIVKTPDGTYLKAYLNGGSATGGYGSLKNLYYETHVSGERKVKADVVIEGEAK complement(1123052..1123249) hypothetical protein; LVIS_1123 N/A MFNYSSEVKWIRVTDIDGGLVWINLDKVERIYRTSDGSTFECADTVTRTNIPFEKIPDLLDGGSQ complement(1123261..1123476) hypothetical protein; LVIS_1124 N/A MNNIYVVFEDIDEDGGFGDAIPTKEAVIAFYTKSKADEYVLENSHEEVYDVPYDELKRGGMHVETVPVKDD complement(1123469..1123888) hypothetical protein; LVIS_1125 N/A MAANEELMDKIRKAESEYGSSDKWPDSIVKELNRLANRLPDITHTENILMIRRMIQHGFDNYQIVESRRVSIGHIRHIRLEMTRAGELDYEATPDELKQIQYNVSHMLNPNNQVIATAMGRKKDWVRFMREKLREADNE complement(1123900..1124601) PHAGE_Staphy_187: ORF020; LVIS_1126; phage(gi66395235) 1e-28 MQLFLPVEEDSNGKLLINLSDVDPPTRRIIAGNVGQLAEIKFDDGRHITIDQRKKIFALLGEIDQWTGNFTMDITERQMKQLFISEKGLDEEFSFSDCSLKLASEFIEFLIGTCFEYDIPFAGKTLDAIREQYGWDMFCIKYHRCMICNQPADIAHVHAVGIGRDRNHISHIGNYVMALCRRHHQEQHRVGIKSFMKENQLKGVKVTPEIAKMLKLGNWQQEQGQNLRFINAE complement(1124602..1125015) hypothetical protein; LVIS_1127 N/A MTSQYMSTQDFNEIMNANGWHMSQAVKVYLVKASHCFKQYQLMTKAAKAHPKNKVLQAEYRHLDELRASYVWDALDTAEIEYLQQWRFLEDKGDFIQAMMLKYDGDLSKCKNEEKAKADYIEALESAKQQEIRNGVR complement(1125008..1126252) PHAGE_Lactob_Lc_Nu: putative DnaB-like helicase; LVIS_1128; phage(gi78000024) 1e-60 MNDDIEKEIIAILLKNPKDIELINLNPEWLSDSDCRALYMAMKSTDDTSLMTIFGKAKTLFEQMTLGYSDLITLRSSAITDAHLSEMVKDLHRVYAENQLDQVIQMYQEAPYDDNLEKLSVAINSVNSIDERVDDGSIGAEAEELRYNLDHPVQAGIKSYSQLDTCLAGGFYGGMLFTLGARPGVGKTAYSVNLAAQMMSKNPKLHVDYFTLEMTKREMLNRFISRDTGVPSTVLRANANGLKPVLKQIVKQSSEKMERLNLAVYDQTKTLAQIAGVIRRHASEAKQNEYIAFIDYIGLVTVPGFKERYLQVGEITRQLKVMANEYNVPIVALTQLNRGIESRQDKAPQLSDIRESGSVEQDSNVVAFLSRSSIQDDIINLDVRKNREGMLMQIKYQFNGQGMKFQELELDSSD complement(1126253..1127005) PHAGE_Staphy_77: 77ORF016; LVIS_1129; phage(gi41189531) 5e-36 MAEAPSYYAIIPANVRYDQNLPGKAILLYGEITALCNQKGFCWASDDYFAKLYGVTKMTVQNWLKSLERENYISREVTYKKDTKEIEHRLIRIEMTPTKKNLGTPTQKNFRDNTTSINKNHSGAEPKEDSIHYKKIINFLNEKAGRDFKDVEGNRKLIRARIHDGYSEHDFALVIDFKCKQWLNDDKMEKYLRPGTLFGSSKKFDQYLDEAKQNRKQQANTTEPQGLSVGEGSARAANYLAELEKQYEGD complement(1127006..1127203) hypothetical protein; LVIS_1130 N/A MEVTVTRVKKYNAAWNNVVSVDGVPVAIAKSAHRAGQIAAYIQGLPAEVNDLWLKRELKKIMAVI complement(1127273..1127857) PHAGE_Lactob_Sha1: hypothetical protein; LVIS_1131; phage(gi418489845) 7e-33 MSLFTTDSSNVFGTGVQEAGSYNVKIVKAEAGKAKNSGRETLTLDYQVLDGKYAGGEIRYQTMTWIDDDSEKLKQSIRRFNTLVVALGVGDGVTIESIPQLAKSVLNKELTVDVDWGDPNNKGNVYLEVRGYHLLDPEGSKPNGIKRSDSQSNKQHNGGFNNASTGTPTTPTADPFAGSGSGDTVDISDSDLPF complement(1127854..1128552) PHAGE_Lactob_Sha1: phage nucleotide-binding protein; LVIS_1132; phage(gi418489844) 9e-90 MKFYKDGAIQPIPNMYFVYGDGGTGKTSLVKQFKGHKLVFSFDMSSNVLIGDKDVDVAILEEKDAPTVQNLVSTMVTRAFGQDRYDVIVLDNVTALQNLVLENIDGASKDGRQNYQKLQLWFRKLGMALKESGKTIYATAHQIDTGNGDGLSSKGRFAADMNEKTFNAFTSMFDLVGRIYLKDGQRFIDLDPENGNHAKNRLDNRKLIKADELLDVKKTETKKTTKKETDKK complement(1128553..1129446) PHAGE_Entero_phiEf11: putative replication protein; LVIS_1133; phage(gi282598768) 9e-35 MAENELVAFEPSIEVNPTPIVINNLEQLEMAVNGVVTKYGQDFVVTSDNVADTKKMRANINKIAKSINDKRLETDRQYKKPMADFDKLMKGLGSKVKNLLDPLDSKIEEIETQERQARYDSVKAEISEMAPNYGVSATDIEIQPGWLLKSLSHKKLLEQIAEAMTQLRKDRDQRATDIQTVRMYADQLELESSGWAELISKGEPVSDILAEMDAAAAKRDKERQKKAEKAKAAKEAQAAIDATHQVKQGDETIDTDTGEVVPQVITVKLTGTHKALGQVWAGAKQLGVRVELVDKED complement(1129439..1129618) hypothetical protein; LVIS_1134 N/A MNKVGKQDLIEAYESIEVSLQQRIALTPVSQFKQLLHDFTQLYRTKGKLARLKGVSVNG complement(1129774..1129896) hypothetical protein; LVIS_1135 N/A MISVIIFILVFGLGGLLRTMYERQALKGGEKHRAKSDNRK complement(1129945..1130223) hypothetical protein; LVIS_1136 N/A MELTLDDTKDSALIRGIIAVLLPALRKELSVKEELLTVQQLNEEYYHISNEAMAAIVRQKGYPSCDIPGNKNPKYSRRAVEKYIAEHQDYHN complement(1130312..1130566) hypothetical protein; LVIS_1137 N/A MNPEYFAQEVAANAKKGMVDYDNIRFGAEVKSAASRGETKLSFDFRYKLSNEMLDALEGQGIELISLADDKYQFDISKLVNSLC complement(1130579..1130776) PHAGE_Brocho_BL3: gp36; LVIS_1138; phage(gi327409428) 8e-05 MEFDSVREAMEFLISYNESPRKNIKVDGHEPSFEDLQEANREALYSACDLLGMSDLYLHLGEQTA complement(1130789..1131571) PHAGE_Brocho_BL3: gp34; LVIS_1139; phage(gi327409426) 6e-55 MNELKQVKFNNELILTTEQLADFYGTTSRRITDNFNANRTKFVEGTHYFHLEGDQLKAFKNQTRKTGLVNEHAGAINLWTKRGASRHSKMLGTNQAWDMFDQLEENYFNPKSHLNTSGLSPELQFMQGVVDKLAASERTQHRLENKIDGVSEIVATSTMDWRNETSHLISKIARQQGNTGESYKMTRNDIYDEVDRRGGVSLKTRLTNLRRRMAEEGTSKTQRKNTTKVDVIAHDKKLIEIYTAIVKEYAIRYQVWNEEY complement(1131584..1131802) hypothetical protein; LVIS_1140 N/A MVEQAIDDAALEIELKYTAALKRHGLSQKAMAALLTTQDEKVAPSQVNRAVKGGNEPKSQRIRFQMAKILGI 1132061..1132477 PHAGE_Lactob_phiadh: Rad protein; LVIS_1141; phage(gi9633005) 5e-11 MSVFDNIKKYSKNRGMNLQQVAVSAGLSKNVIYQYNKGKSPSIDTLKKIANVLGVSAETLLGNQDESKSTTNDIQKVNIEKLLDGTAMLTDRDGELTDADRAALRALISTYLQSTEGRERLKKYSNMELDDNGGNGDD 1133019..1133903 PHAGE_Lactob_A2: hypothetical protein A2p22; LVIS_1143; phage(gi22296544) 1e-05 MNKIAMYFICTVSIGALTGCGTNNSKQVSKKVATTKIDLLGNFKSESNGVYNLKGKTNPGAKVWYRYKVGSKTFKNSLLANKSGKFQIRVVNTSADQDTTNVEVDVKAKGLKQNYDVASIENHSSEFVSKRSKRYKLTSSDKAYLASSRVKASYDKKRNAAKQSSEEEGIEKQIDNDSKKSNSTKSSYKSRYKSVSLDDFIGNPERYEGKNIKTSGTVSYIQRESDNNTMDYVVLNNSDDSAATVTEIEVEDMHDNHITEGDNITVEGGGLTQTVKLHGKTLKSDIIVDSVIVN 1133963..1134712 PHAGE_Brocho_BL3: gp30; LVIS_1144; phage(gi327409422) 6e-05 MAKKTIKGEDGKLYEVKELKPKNKWYKRWYTWTGLIVIIAAASGGAYAYHVHQVNEQFANVQTVPASSDDSSSDDESSDTNSTDEDSDSSIQLSDGSSINVKETQAYKTSFGDTSYKGTDLEIYNVTTATTDSFTHDDVDTGDTTEHGYIAVDMKYTAGDEDMTIYADQAVLNTSDGQQINIDAEDSKLGEDVNVGSTRKSTMVFMIPKMTKTDQFSSIRLKMDAAPQDDDSADMHTYDATVQLNDPKE 1134782..1135543 PHAGE_Lactob_LF1: hypothetical protein; LVIS_1145; phage(gi418489416) 1e-20 MANFNPIPDETTNAALEPTAKALGDASGSLFTAGFHFIFDPLRKYNIRKEQELTDYANKIQNHITDIPEEYRDSSKVNIVLKAVDDSKFRLDDNEMQEAFARLIANALDKRTNKDFYPSYSDILSNMSYSEALTLKRIYSNPFSHVPISTKTSSNMDGSESYNLSPRTYLFDNKNDSSNQTNIAIDLLVHSGLVDVREDAWLTSPYFTKKYDAFEKLEKASPLASISPQRKIDFKKGVVSLTNFGTSFVKFIV 1135535..1135546 attR N/A ATTGTTTAACTT 1135879..1137333 PHAGE_Strept_pyogenes_315_1: putative integrase; LVIS_1146; phage(gi28876146) 6e-18 MKKDSRIYTYETKNSRIRKYGVDFCRSYHGQKHSIRKRGFESSYDAIEWANKAERDAQLNTGTAKHVTVEEYYHQWMDRNEQYWSVETYHDYHMKFKNYLLPEFGKYELRDVTRDQFQRFISKLEKVPRSAGRVGYSSKTISTIKSYMSMLLNDAVYSGIIPSNKLRNLRIKSNVGVQNSEIDVKTYDRAIKTADRILSPGYLAAFYLSLVALRHGEILGMQPKNIFEDHVHIDLTRTAHQPEGGKTKTPAAVRNVPITPKIYQLLQGAVRYARQLYLDNDKQFTSDSFIFVNEEDASPWSYTRLNYIFDIINMAMGNRIAVYGSGSIYVDDSDGHRIIVDSNGQIRFATDNGFQPGKKSMVKLTYNIMDEYTGIEVTNEDGSKILVTTQVENVKAEARLLDKSGREIANATIGDKANVTILNNPHIFPHKMRHAFATFSVPVADDPVDVMKIMGHTDLRMTRYYDNGTKVGQQKIVNMMERLG