Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 30 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2779979..2779990  attL    CGACTCCGGACA  N/A  Click
2 complement(2784965..2786374)  PHAGE_Xantho_Cf1c: A coat protein; XCV2455; phage(gi17975746)  4e-19  Click
3 complement(2786566..2786796)  PHAGE_Ralsto_PE226: putative major coat protein; XCV2456; phage(gi327198632)  1e-05  Click
4 complement(2786808..2787011)  hypothetical protein; XCV2457  N/A  Click
5 complement(2787015..2787311)  hypothetical protein; XCV2458  N/A  Click
6 complement(2787641..2788360)  hypothetical protein; XCV2459  N/A  Click
7 complement(2788487..2788672)  hypothetical protein; XCV2460  N/A  Click
8 2789023..2789811  PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p2; XCV2461; phage(gi70727680)  2e-43  Click
9 complement(2789850..2790242)  PHAGE_Xantho_Cf1c: hypothetical protein Cf1cp6; XCV2462; phage(gi17975753)  1e-24  Click
10 complement(2790272..2791594)  PHAGE_Stenot_phiSMA9: putative zonula occludens toxin; XCV2463; phage(gi70727682)  3e-136  Click
11 complement(2791596..2791916)  PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p5; XCV2464; phage(gi70727683)  3e-25  Click
12 complement(2791939..2792040)  putative filamentous phage phiLf protein (fragment); XCV2465  N/A  Click
13 complement(2792051..2793037)  PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p6; XCV2466; phage(gi70727684)  1e-52  Click
14 complement(2793167..2793295)  filamentous phage phiLf major coat protein VIII; XCV2467  N/A  Click
15 complement(2793323..2793439)  putative filamentous phage phiLf minor coat protein IX; XCV2468  N/A  Click
16 complement(2793415..2793546)  filamentous phage phiLF minor coat protein gVII; XCV2469  N/A  Click
17 complement(2793578..2793874)  PHAGE_Xantho_Cf1c: V protein; XCV2470; phage(gi17975750)  3e-44  Click
18 complement(2793871..2794911)  PHAGE_Xantho_Cf1c: Probable site-specific integrase; XCV2471; phage(gi17975748)  0.0  Click
19 complement(2794904..2795089)  hypothetical protein; XCV2472  N/A  Click
20 2795231..2795482  putative secreted protein; XCV2473  N/A  Click
21 2795525..2796046  PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p2; XCV2474; phage(gi70727680)  8e-05  Click
22 2796065..2796493  hypothetical protein; XCV2475  N/A  Click
23 complement(2797211..2797954)  PROPHAGE_Escher_CFT073: transposase/IS protein; XCV2476; phage(gi26248359)  1e-20  Click
24 2798032..2798319  PROPHAGE_Xantho_33913: ISxac3 transposase; XCV2477; phage(gi21231087)  4e-10  Click
25 2798328..2799188  PROPHAGE_Xantho_33913: ISxac3 transposase; XCV2478; phage(gi21231086)  2e-55  Click
26 complement(2799162..2799371)  putative replication protein C (fragment); XCV2479  N/A  Click
27 complement(2799416..2799865)  putative replication protein C (fragment); XCV2480  N/A  Click
28 complement(2799822..2800697)  PHAGE_Coryne_BFK20: gp43, RepA like protein; XCV2481; phage(gi157168416)  9e-10  Click
29 2800975..2800986  attL    ACGCAGCGCCAG  N/A  Click
30 2801007..2802035  LuxR family transcriptional regulator; XCV2482  N/A  Click
31 2802139..2802384  PHAGE_Salmon_SPN1S: putative transcriptional regulator; XCV2483; phage(gi374531228)  2e-09  Click
32 complement(2802474..2803676)  PHAGE_Escher_TL_2011b: putative integrase; XCV2484; phage(gi418487628)  9e-123  Click
33 2816207..2816218  attR    ACGCAGCGCCAG  N/A  Click
34 2818386..2818397  attR    CGACTCCGGACA  N/A  Click
Region 2, total : 9 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4476724..4476735  attL    GCTCAGTCGTCG  N/A  Click
2 4485662..4486141  PHAGE_Cronob_ENT39118: protein umuD; XCV3904; phage(gi431811072)  6e-14  Click
3 4486141..4486437  PHAGE_Cronob_ENT39118: DNA polymerase; XCV3905; phage(gi431811050)  4e-20  Click
4 4486424..4486795  PHAGE_Cronob_ENT39118: DNA polymerase; XCV3906; phage(gi431811050)  3e-08  Click
5 4486844..4487299  PHAGE_Pseudo_phiCTX: predicted tail completion; XCV3907; phage(gi17313233)  1e-35  Click
6 4487471..4488295  hypothetical protein; XCV3908  N/A  Click
7 4488959..4489147  PROPHAGE_Xylell_Temecula1: phage-related integrase; XCV3909; phage(gi28198969)  4e-06  Click
8 4489169..4489969  PROPHAGE_Xantho_306: phage-related integrase; XCV3910; phage(gi21243357)  9e-72  Click
9 complement(4490035..4490110)  tRNA  N/A  Click
10 complement(4490383..4490703)  hypothetical protein; XCV3911  N/A  Click
11 complement(4490897..4492774)  PHAGE_Synech_S_CBS1: group2 RNA polymerase sigma factor; XCV3912; phage(gi356870821)  2e-35  Click
12 4494346..4494357  attR    GCTCAGTCGTCG  N/A  Click