gi|78045556|ref|NC_007508.1| Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, [asmbl_id: NC_007508].5178466, gc%: 64.75% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 2779979..2779990 attL N/A CGACTCCGGACA complement(2784965..2786374) PHAGE_Xantho_Cf1c: A coat protein; XCV2455; phage(gi17975746) 4e-19 MLVAATLAWCGMGKAHAANCDATSDMCSEGDAWNAARQLADSRGPDTCKLVGGNNASYTGPNIEKDPGNSSKDVAALAVRVSCSNGSLPFLGTKYYVTAKSCEQEPGYTGGGPWGTYVGTARNGSIGCRNGCDGVWFGNGDGSMTWGSTGAVCPTDPEKTCDAMGKGYGWNGYLGVCEPPPTEECPEGQVPDGKGGCSTNKCPEGMLLQADGTCAPKKNDCPAGMIKSPTGSCLPGDGQCAAGEVRGPDGTCKKDADGDGEPDGDGEGGEGEGDSKSEFSGGDSCDSPPSCSGDAIMCGQARIQWRIDCNTRRDVNITGGSCAAMPVCVGKNCKALEYSQLLMQWRAACALEKAANNSGGGTGNNADVKAIRDAITGNGTADIGADGKPADAFSDESGYGEDGYPTGELDTQGFGYSRTCPTIPDVAVFGQTLHFDTSKFCQWMVLGGQIVLVMASLVSLRLMSQGGSA complement(2786566..2786796) PHAGE_Ralsto_PE226: putative major coat protein; XCV2456; phage(gi327198632) 1e-05 MRKLKTLFKNKTAALAAVGSAALVSAPAFASGGGGVDVGDVVSAIQGAAGPIAAIGGAVLTVMVGIKVYKWVRRAM complement(2786808..2787011) hypothetical protein; XCV2457 N/A MAVLIPACLEADLDTAAGTCTAVIWIPQPSLLPELAVKDAQAIGSAIAFLWATAYVFRLIRKKIQQS complement(2787015..2787311) hypothetical protein; XCV2458 N/A MSNAPKITINSAVETRTVTTSKGLPKAIYSQRATLETEAMRIQIEVECDGPDKGYPVGTVKEWDLVTDLVPGRFGVELARRMTLVDPQAGKAPQRQAA complement(2787641..2788360) hypothetical protein; XCV2459 N/A MSHEDAAVQASPLPEQSLLSVRGSAVSDVERVRCEVDGLHRLRRADLEAQGYAELLQRMQWQQFWTLTFRIEEAGRTGGVHPEKADKAFRFFASCINREIYGPKWSTKSHGGIQWARGQEFHKDGRLHFHAVAAAPTDDLNRLMSRYQWHEFWFKEFGRNRIEAPRSQLDITGYVSKYVTKGGVVDVSKNFGAWTPPPIDYTRRPVQAEFDQTTRKGSIEALNRGVGAAPLRTGQRKRR complement(2788487..2788672) hypothetical protein; XCV2460 N/A MSRPTDTERGARIALDYVESKLIQRDLFPSRRTPPLKFWREIKAIATEHLAECKALREARA 2789023..2789811 PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p2; XCV2461; phage(gi70727680) 2e-43 MSQSYDLFCRWKHVQKIQSDNAGAIALGVTRAAVSSWKKGKNAEIQFIERMAEDIGDNPETWSALVMAERSNSEDERAAWKRIAQRLAGVSLGLLLLLGVSLPGRAEAAIHHAFEANNASPSIHYAKWTVDAPVRPGGLSMLVPPQEADWMTIDTYERVDLTGPWAGFGFQGHRFFTPEGRDIDPVGMRYWSLTCNIAREWALMMAEERERVWHARPAEVIYLRDVLRRRREMRLSVVDGAGSADRSTVIRRTRGPRGPRRG complement(2789850..2790242) PHAGE_Xantho_Cf1c: hypothetical protein Cf1cp6; XCV2462; phage(gi17975753) 1e-24 MDIRAFFVVLFVASVPASAQQVFKCVSGAQVVYQSAPCPGVTAKQWDAQPEPDNPALRQRLARTAAQLRARNASPVRSGSGTYVAASSSKDRYACEVAKEGRRAAYEAAGVHRSFALSSYWDNAVQDACK complement(2790272..2791594) PHAGE_Stenot_phiSMA9: putative zonula occludens toxin; XCV2463; phage(gi70727682) 3e-136 MHVFNEGVPRAGKSYDAVKNHILPALKKGRRVFARLNGLRFDRIAKHLGIAESDVQSLLVLVDTKDVTKLFACTQDESGKWCIPDEFKDSLVVIDEVHEFYVNERKPLSPAVENFWALLGQNGGDAVIMTQWINRLHSAVKARIEKKNTFQKLTAIGMKGRYRVTYFHTTSPGKFEKVGGQTLKYDPAIFPLYDGYAPGAENTEVYEEGGKNVWAAMAVRAAIFIVVGGVGIYFFVHYFTKDRSDPNKPVASASQTNKPAHVGAGLANGAPSVPIQPPPPDPLADLTQEQRYVAELASKGRIRLSARARVGDQDRAWVQWIDESNNVIEELDLTQLRALGYSVSVVTYGVRLSAGKHIMVATAWPWTAPIREKDARLYNMAPDGSGGAAGVATVGSDGGGADRDRVRGGVIEYGPRTQGTFPDNKAYTTNTTTPATTLQM complement(2791596..2791916) PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p5; XCV2464; phage(gi70727683) 3e-25 MQAGWFNDLTAWLWRAVKLVWQAIVDFVGDLFVMWLEQSLAAILYVLTLLPMPDFMKGQSIGGMLGNAGSTILWFADVFKIGPALVMIGAAMVFYLLRRVLTVGIW complement(2791939..2792040) putative filamentous phage phiLf protein (fragment); XCV2465 N/A MQAGWFNDFTSRLSRALKAVWDGYCDFMSELWR complement(2792051..2793037) PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p6; XCV2466; phage(gi70727684) 1e-52 MITVRLVACILAVALWSCAFSANAAMCRDAADACDQGQAFLAARMLADQRGVDLCKLVGGSNSLYKGPDVVAESAGIYNAQATCSIGGPAGAGSTFYSKTCAQRPPLIGASSSDGSGFSCDDGCFYNFTVGASGGSGMYPSGATCSAGDAPPSTPGDDGGDGDGGSDGGGDGGSDGGGDGGSDGGGDGGSDGGSDGGGDGDGDGDGDGDGDGDGDTPGDGDGTTPGQGEGGEGAPMSELYNKSGKTVESVLSKFNTQVRGTPMVAGITDFMTVPSGGSCPVFSLGASKWWNAMTINFHCGGDFLAFLRAAGWVILAIAAYAALRIAVT complement(2793167..2793295) filamentous phage phiLf major coat protein VIII; XCV2467 N/A MGDILTGVSGAEAATAMIAAAAIIALVGFTKWGAKKVASFFG complement(2793323..2793439) putative filamentous phage phiLf minor coat protein IX; XCV2468 N/A MPSKEDAVAWSTGCCGLVIVWFVLGRLAGSVAGMFNDR complement(2793415..2793546) filamentous phage phiLF minor coat protein gVII; XCV2469 N/A MARWCPPVNRLASAAATCSSVVANTACMRWCKKRSPCPARRTP complement(2793578..2793874) PHAGE_Xantho_Cf1c: V protein; XCV2470; phage(gi17975750) 3e-44 MKVQVMSSAVAVRSFPAREGKPATHFREQTAAVLREGDFPLPFTIGLDEDQPPYGEGFYIIDPKSLQNNKFGGLEFGRRIRLLPDLTAKLQQQPAKVG complement(2793871..2794911) PHAGE_Xantho_Cf1c: Probable site-specific integrase; XCV2471; phage(gi17975748) 0.0 MADGTCSFCGETTVYFFPGGLCVACTGKNARIRMQEQPTQSRELSAFDTSVGVMQAATRRTEIAAEKIQKNKRVVGTSVREFDAAHPIALTAEGQRAALALGLVHYKTSDTRASTTGTVTIEIDPLQARAQRLRKSVITGARLHDQEAKKGSFRGAWYFLTLTYRDGSDSSPRDVSELFKRMRGHFNRLKSGRARWNRESFRYVWVGELTQRFRPHYHVMLWVPTGMYFGKVDQRGWWPHGTTQIEKARNCVGYLAKYASKFTALTAGAFPKGFRTHGIGGLDTESKRELRWWKAPKDAREALGGEADIRKAKGGWFDRLTGEFWPSPWKVTFIFGRTFAWKVVQL complement(2794904..2795089) hypothetical protein; XCV2472 N/A MLVMTDAPSVQWLIAAARVHGGPRIYVLTIVVNGNPVEQSYFASRTDAAVARDAAMEFYRG 2795231..2795482 putative secreted protein; XCV2473 N/A MRTLSCALLSLSGSAHGTLEVCDTNLMPSLSNQVVFPQLTKNGSVAAIQDPADKARCADAAYQAGGTEKCECDDVHQAPSPAP 2795525..2796046 PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p2; XCV2474; phage(gi70727680) 8e-05 MPKHGCMYSFHCPLCQEKPVMDHVNNLLDTVRKSCAIPSDNMLSKKIGVTRALISGWRVGRYPVPDARIAELCAMAHLDGGEWMAKIHAEAAASPAEKALWRSVLDRLSAAAAVVALLVLAVHTGAHDALLAALSPVALTHPLYIMRDHLVVRRGLGCAGSGFGSRPAAEPFP 2796065..2796493 hypothetical protein; XCV2475 N/A MTDTYNLDRRHRAGCWRAMPKQLRGRSTSARVTNHVELTGPCAGWRLAGRDLVAPSGERIPERRLRGLLWHANATDIRASVRRRNAKRKAVQQSLVKVVVMDLGEQREQHFVKIAGQDVGALRYRFIRTAHQPTLEPSLAGD complement(2797211..2797954) PROPHAGE_Escher_CFT073: transposase/IS protein; XCV2476; phage(gi26248359) 1e-20 MSLEHTIDQLRTLKLTGMVAGVEHQLAQSSYGALGFDQRLGHLVDAEVSQRDSKRFTRLIRNAKLKVYAEPEAIDYRVGRGLDRSVIADLLTCGWIEHRQNVLVTGQTGTGKTWLACALAVQAARQGITVGYRRVGRLLEDMEVGHADGSLAKLRNQLARTGLLILDDFGLTPLSSRGRADLLELLDDRVGSGATIVAGQMPVQDWHAFIHDPALADAIMDRLIHSSHKLALKGESMRKTKAAKSWK 2798032..2798319 PROPHAGE_Xantho_33913: ISxac3 transposase; XCV2477; phage(gi21231087) 4e-10 MSKRRKFTAEFKRGAVEQASQPGVSCAQVARELGIRDTLLTRWKREAQTPGTAAFGGSGTPRDEELARLKRELARVKKERDFLREAATFFAKGSP 2798328..2799188 PROPHAGE_Xantho_33913: ISxac3 transposase; XCV2478; phage(gi21231086) 2e-55 MIERCRDEFPIRLMCRCLKVSASGYYEWSKRPASARQLDNERLVVRMRELHEDSRGTLGAGRMREDLAEEGETASLNRVARLMAADGLQGWPRRKRRGQRGSPAVTPPGVVNLLERDFLALEPETKWVTDITEIKTQQGKLYLCIVLDLYDQRIVGWSMHARQDRQMVIRAVQMAVWQRQGSDEVIVHSDRGSQFRSGDYQRYLTANGLICSMSAVGHCGDNAACEGFFGLLKRERIYRTSYATLDGARADVFDYIERRHNPRMRRRAAKQDQKVAALLQPSVISG complement(2799162..2799371) putative replication protein C (fragment); XCV2479 N/A MSYAFDEEDGRLFVALNPQIAEAILGRRPYTRIEMAEVRALQTDPARLIHQRLCGWIDPGVLPRYHGRL complement(2799416..2799865) putative replication protein C (fragment); XCV2480 N/A MRKDVMVGGEAMAFDLTHARHDPMHCLVPGLFRSLKRGERKKLKLDVTYHYAENEQARFVGFEPLGADDMRLLQGLVALGGPKGIILTPEPTADLPRQLRLFLEPKFDAVGQDALVVRESMTSLLCEIGLTDGGDISGRSRRACCAWQT complement(2799822..2800697) PHAGE_Coryne_BFK20: gp43, RepA like protein; XCV2481; phage(gi157168416) 9e-10 MAIDVLAAFECEPPALDFIWPGFLAGTVGALVAPGATGKSFWALEAAMSIACSVAGGDLVGLAPAHTGRVVYLAGEDPPPALVRRIHAIGQHLGHAARQAIAENLALEPIMGKRLNVMDEAHLRRVIEYSAGARLIVLDTLSRIHALDENSNGNMAHLVAVLEQVAATTGASVLYLHHVSKGSAREGLTDQQQAARGASALIDNARWCGYVARMTEDEAKRLSDRAHDRQPIGDERRGYFVRFGVSKQNYDATPLDRWYMRHAGGVLVPVELYEASRNEERRDGRRRGDGF 2800975..2800986 attL N/A ACGCAGCGCCAG 2801007..2802035 LuxR family transcriptional regulator; XCV2482 N/A MAIMVDMENEEHAKKRLGRYYIPIWEGCDPTVSQSIKDFRERWKPYSTSSRRYPIGRLIQEVIDPAVAAYMATLPVRYSGYVPGAGTGVGFSAIIGLVGLDAMVRVQRQLLRQFIKTEDRQTPRDHRFTATLEALIELVCCCASKRPQTSAPAQGVSLNAQRKHGFCDFCGELTEFSAFMANVAEQQVNDAELENRKKLELSHQYCEGHRPKLTNGEWNPAYRQAKRSLAQFELELARLSLQCAKPATPQVKSGDQLVDGYFFHYVMRQTLQPADKAELRNQARLMVDSKLSDRKKQILMLQCSGLNQSEIARRLGIERQAVSKALASIPAMFHLKKKRPIR 2802139..2802384 PHAGE_Salmon_SPN1S: putative transcriptional regulator; XCV2483; phage(gi374531228) 2e-09 MQAATSKTLINRKKLLAMIPLSERTIFNMEQRGEFPRRIALTSRNVAWDLAEIEEWIEARKSSGTQAMRPGFTPSVAATAF complement(2802474..2803676) PHAGE_Escher_TL_2011b: putative integrase; XCV2484; phage(gi418487628) 9e-123 MLTDTKLRNLKPKDKLYKVNDRDGLYVAVTAAGAISFRYNYSIHGRQETITFGRYGVGGITLAEARERLGEAKKMVAAGKSPAKEKARDKARVKGAETFGAWAEKWLRGYQMADSTRDMRRSVYERDLKPKFGNQKLVEITHEDLRALTDAIVERGAPATAVHVREVVMQVYRWAIERGQKVENPAELVRPTSIAKFEPRDRALTPDEIGLMYQYMERIGTAPSIRAAAKLLLLTMVRKSELTNATWSEINFSDALLTIPKERMKRRNPHLVFLSRQALDIFIALKTFAGGSDYVLPSRYDSDLPMSSATLNQVLTLTYRLAQKEGKPLAKFGPHDLRRTASTLLHEAGYNTDWIEKCLAHEQRGVRAVYNKAEYREQRTAMLQDWADMIDEWTLKRSKA 2816207..2816218 attR N/A ACGCAGCGCCAG 2818386..2818397 attR N/A CGACTCCGGACA #### region 2 #### 4476724..4476735 attL N/A GCTCAGTCGTCG 4485662..4486141 PHAGE_Cronob_ENT39118: protein umuD; XCV3904; phage(gi431811072) 6e-14 MLSLPPPRTYARLLGPACLEPAPLSLPVSALRIQLGFPSPAEDFQDDELDLNRVLIRNPPATFLYRAEGWSMILAGVCDGDILVVDRSVSPINGDMVLAIWEGNQPVCKILQVAVDHIELHSRSPHCAPIVLAPGTEVEVFAVVGVVRQVTRAHSRAGR 4486141..4486437 PHAGE_Cronob_ENT39118: DNA polymerase; XCV3905; phage(gi431811050) 4e-20 MFALIDGSNFYASCELVFQPDLRDRPLVVLSNNDGCAIARSDEAKALGVTMGQPIHKVPSQIRRRLTLRSANFGLYGDIASRIGVPWPSRAACGGVLH 4486424..4486795 PHAGE_Cronob_ENT39118: DNA polymerase; XCV3906; phage(gi431811050) 3e-08 MYSIDESFLDLAGIRDRRQLSVDLSERVHQWTGIPNCIGIAPTKTLAKLANRVAKDAARKLGSYPAGLAGVCDLAALSGSELDAVLRATSRRDRLRGRHPRQRCRGSVDQVTADRARRGDSEG 4486844..4487299 PHAGE_Pseudo_phiCTX: predicted tail completion; XCV3907; phage(gi17313233) 1e-35 MDELTALENWAAPLLARLQPGERRTLARKIGTELRRSQSQRIGKQQAPDGSPYAPRKQQLRQKSGRIKRKKMFVKLRQAKYFNVSASPNAVSVGLLGRVSRIARVHQEGLKDRVRPGGPEVHYSNRVILGITKSEREAIHDLLSLYLAGEL 4487471..4488295 hypothetical protein; XCV3908 N/A MKPSPPADASRDSSHQAEARRADEVSIPGSGSSVINQRVSDWASKPSDELYRNFHDTKSRAEAGDAGAQRQLAEIYEQCAMYSVSPKNFASMLDSYSKIKKENSSRYEQIKGRFSHYCSEVDGGEVIPLEAIELWYKEAARRGDLIAQLKLASGKTMSSEEYQNLVTKAIKSKDPEAIFAVDEMLNNPNASIELGSYAPDNSGNYTEFAWALAACEAGAACGPGSYRSDMICLNYGICGSRYEDAVRTKIVPPGQLNLLNKQVEKIQSIIKTEK 4488959..4489147 PROPHAGE_Xylell_Temecula1: phage-related integrase; XCV3909; phage(gi28198969) 4e-06 MHGIVEERAGKGTRGTLRYIFDRFHESLEFKELAIDTQGDYRRYADSIANYLRKDWSKLSSV 4489169..4489969 PROPHAGE_Xantho_306: phage-related integrase; XCV3910; phage(gi21243357) 9e-72 MVQRLVEVFAMGRPANRYQPALPATPSKANHLHRYLRRALAWRVRVGLCRSNPAIGVRQAREAKKHRMPTPAAFDKVLTFARERASLMPHAKGSCPSYLAPVMVLAYSARLRGIEVCTLNDTHKQPTGIHAQRRKGSRDTLIEWDPEMIEAWDLLVERRTAIWTKNGRNFAVPIKAEDRRLLVEQTGNPMAKSSLDSAWQRFIKLAMREGIISNQERFSLHGLKHRGITNTVGNRGDKQDAAGHVTPEMTGRYDHALPVVKPPRRS complement(4490035..4490110) tRNA N/A GGGCCTATAGCTCAACGGTTAGAGCAGAGGACTCATAATCCTTTGGTTGAAGGTTCGAATCCTTCTGGGCCCACCA complement(4490383..4490703) hypothetical protein; XCV3911 N/A MFLQTSRGVLTATSKLADEWRRDCFMSRQSRFETTTYREHEIRVRAEQASPDAKWTLWVDVYALGGKRQPRIGCNGLAYATYQEAIAHGFRAGRQLIDGQFETADA complement(4490897..4492774) PHAGE_Synech_S_CBS1: group2 RNA polymerase sigma factor; XCV3912; phage(gi356870821) 2e-35 MANERPAQQSDIKLLISKGLEQGYLTYAEVNDHLPDDLVDPEQIEDIISMINGMGIDVHEVAPDAETLLLNDGNTGNREVDDTAAEEAAAALTALDTEGGRTTDPVRMYMREMGTVELLTREGEIAIAKRIEEGLSQVQAALGVFPLSTEMLLADYEAHKEGKKRLAEIVVGFNDLIEEADAAAAALAAAGPVAVSDDEAVDEDDDEDGDDEAAEEEAGPTGPDPVEVATRMENLANEYAKFKKAYAKNGAEHKLVVKAREDMAAIFTTLKLPLPLTDALVTQLRGVVNGIKDHERKVLHLATTVARMPRKDFIRSWEGNQTNLEWVEDALKRKQKWSSALRDVKDQIISEQQGSIEMEKANYLTLGEIKEISRAMAYGEAKARKAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQFGREATPEELAKEMDMPEDKIRKVMKIAKEPISMETPIGDDEDSHLGDFIEDTNVESPIDNTTNINLSETVRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEQLRSFLDID 4494346..4494357 attR N/A GCTCAGTCGTCG