Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 61 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 195628..195640  attL    AATGGTTACATTA  N/A  Click
2 206505..206687  PROPHAGE_Shigel_301: serine protease precurser; CJE0212; phage(gi56480227)  3e-05  Click
3 complement(207115..207315)  hypothetical protein; CJE0213  N/A  Click
4 207469..207564  hypothetical protein; CJE0214  N/A  Click
5 207610..208239  PHAGE_Staphy_12: cI-like repressor; CJE0215; phage(gi29028622)  8e-09  Click
6 208320..208640  hypothetical protein; CJE0216  N/A  Click
7 208650..208844  PHAGE_Lister_vB_LmoM_AG20: hypothetical protein; CJE0217; phage(gi472437265)  5e-12  Click
8 complement(208876..208992)  hypothetical protein; CJE0218  N/A  Click
9 209029..209211  hypothetical protein; CJE0219  N/A  Click
10 complement(209239..210054)  PHAGE_Clostr_phiSM101: putative modification methylase dpniia; CJE0220; phage(gi110804053)  5e-47  Click
11 complement(210256..210744)  PHAGE_Plankt_PaV_LD: G protein; CJE0221; phage(gi371496194)  9e-05  Click
12 complement(210748..212964)  PHAGE_Vibrio_VP882: phage-related tail protein; CJE0222; phage(gi126010872)  5e-48  Click
13 212985..213311  hypothetical protein; CJE0223  N/A  Click
14 complement(213298..213396)  hypothetical protein; CJE0224  N/A  Click
15 complement(213423..213662)  hypothetical protein; CJE0225  N/A  Click
16 complement(213815..214324)  PHAGE_Mannhe_phiMHaA1: tail tube protein FII; CJE0226; phage(gi109289961)  1e-04  Click
17 complement(214351..215544)  PROPHAGE_Xylell_Temecula1: contractile tail sheath protein; CJE0227; phage(gi28198986)  6e-21  Click
18 complement(215555..216568)  PHAGE_Campyl_CP21: putative tail fiber protein; CJE0228; phage(gi422935209)  1e-29  Click
19 complement(216668..217039)  PHAGE_Campyl_CPX: hypothetical protein; CJE0229; phage(gi371670957)  6e-09  Click
20 complement(217036..217542)  PHAGE_Edward_MSW_3: putative tail assembly chaperone; CJE0230; phage(gi448261067)  2e-06  Click
21 complement(217552..218631)  PHAGE_Clostr_phiMMP04: tail fiber; CJE0231; phage(gi414090463)  1e-26  Click
22 complement(218631..219251)  PHAGE_Salmon_RE_2010: tail protein I; CJE0232; phage(gi418489712)  3e-08  Click
23 complement(219248..220414)  PROPHAGE_Xylell_Temecula1: phage-related baseplate assembly protein; CJE0233; phage(gi28198989)  7e-13  Click
24 complement(220411..220692)  PHAGE_Vibrio_vB_VpaM_MAR: baseplate assembly protein; CJE0234; phage(gi428782737)  2e-11  Click
25 complement(220698..220889)  hypothetical protein; CJE0235  N/A  Click
26 complement(220898..221530)  PHAGE_Mannhe_phiMHaA1: baseplate assembly protein V; CJE0236; phage(gi109289954)  1e-13  Click
27 complement(221530..221844)  hypothetical protein; CJE0237  N/A  Click
28 complement(221847..221969)  hypothetical protein; CJE0238  N/A  Click
29 complement(221956..222192)  putative lipoprotein; CJE0239  N/A  Click
30 complement(222201..222542)  PHAGE_Helico_1961P: hypothetical protein; CJE0240; phage(gi422935793)  2e-07  Click
31 complement(222553..222942)  PHAGE_Entero_5: 43; CJE0241; phage(gi108862028)  3e-23  Click
32 complement(223009..223182)  hypothetical protein; CJE0242  N/A  Click
33 223091..223525  hypothetical protein; CJE0243  N/A  Click
34 223527..224342  PHAGE_Haemop_SuMu: bacteriophage Mu I protein gp32; CJE0244; phage(gi418489085)  3e-13  Click
35 224507..224872  hypothetical protein; CJE0245  N/A  Click
36 224875..225852  PHAGE_Vibrio_VHML: ORF26; CJE0246; phage(gi27311193)  7e-11  Click
37 226028..226426  hypothetical protein; CJE0247  N/A  Click
38 226419..227018  PHAGE_Burkho_KS10: hypothetical protein KS10_gp05; CJE0248; phage(gi198449267)  6e-05  Click
39 227105..228688  PHAGE_Pseudo_JBD24: hypothetical protein; CJE0249; phage(gi448245076)  4e-95  Click
40 228698..230068  PHAGE_Pseudo_B3: portal protein; CJE0250; phage(gi56692600)  3e-12  Click
41 230070..231308  PHAGE_Pseudo_DMS3: putative virion morphogenesis protein; CJE0251; phage(gi119953653)  2e-21  Click
42 231434..231808  PHAGE_Ralsto_phiRSA1: bacteriophage gpU; CJE0252; phage(gi145708105)  5e-08  Click
43 231801..231992  tail protein X, putative; CJE0253  N/A  Click
44 231986..232963  PHAGE_Entero_2: P2 gpD-like tail protein; CJE0254; phage(gi169936019)  3e-16  Click
45 complement(232960..233244)  DNA-binding protein, putative; CJE0255  N/A  Click
46 233338..234009  extracellular deoxyribonuclease; CJE0256  N/A  Click
47 complement(234001..234276)  hypothetical protein; CJE0257  N/A  Click
48 complement(234323..234772)  PHAGE_Entero_Mu: hypothetical protein Mup16; CJE0258; phage(gi9633506)  1e-05  Click
49 complement(234769..235461)  hypothetical protein; CJE0259  N/A  Click
50 complement(235461..235730)  hypothetical protein; CJE0260  N/A  Click
51 complement(235727..236689)  hypothetical protein; CJE0261  N/A  Click
52 complement(236798..237184)  PHAGE_Campyl_CPX: hypothetical protein; CJE0262; phage(gi371670986)  4e-21  Click
53 complement(237181..237453)  PHAGE_Campyl_CPX: hypothetical protein; CJE0263; phage(gi371670991)  1e-14  Click
54 complement(237517..237696)  hypothetical protein; CJE0264  N/A  Click
55 complement(237693..238178)  PHAGE_Haemop_SuMu: host-nuclease inhibitor protein; CJE0265; phage(gi418489043)  3e-05  Click
56 complement(238285..238626)  hypothetical protein; CJE0266  N/A  Click
57 complement(238722..238907)  hypothetical protein; CJE0267  N/A  Click
58 complement(238891..239094)  hypothetical protein; CJE0268  N/A  Click
59 complement(239097..240020)  PHAGE_Haemop_SuMu: phage transposase; CJE0269; phage(gi418489040)  5e-27  Click
60 239766..239778  attR    AATGGTTACATTA  N/A  Click
61 complement(240090..242162)  PHAGE_Simian_1: reverse transcriptase/envelope protein; CJE0270; phage(gi9632567)  3e-06  Click
62 complement(242162..242362)  hypothetical protein; CJE0271  N/A  Click
63 242507..243139  PHAGE_Salmon_ST64B: regulatory protein; CJE0272; phage(gi23505482)  1e-11  Click
Region 2, total : 41 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1335616..1335628  attL    TTTTATCTTTTAA  N/A  Click
2 1335926..1337101  PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; CJE1418; phage(gi16130540)  4e-32  Click
3 complement(1337098..1337304)  DNA binding protein, putative; CJE1419  N/A  Click
4 complement(1337306..1337659)  hypothetical protein; CJE1420  N/A  Click
5 complement(1337677..1338432)  PHAGE_Lactoc_Tuc2009: putative methylase; CJE1421; phage(gi13487817)  4e-98  Click
6 complement(1338410..1338676)  emm-like protein; CJE1422  N/A  Click
7 complement(1338660..1339031)  hypothetical protein; CJE1423  N/A  Click
8 complement(1339032..1339256)  hypothetical protein; CJE1424  N/A  Click
9 complement(1339265..1339759)  hypothetical protein; CJE1425  N/A  Click
10 complement(1339963..1340277)  hypothetical protein; CJE1426  N/A  Click
11 complement(1340356..1340676)  hypothetical protein; CJE1427  N/A  Click
12 complement(1340669..1340773)  hypothetical protein; CJE1428  N/A  Click
13 complement(1341064..1341300)  hypothetical protein; CJE1429  N/A  Click
14 complement(1341314..1342081)  RloG protein, putative; CJE1430  N/A  Click
15 complement(1342098..1342247)  hypothetical protein; CJE1431  N/A  Click
16 complement(1342219..1342347)  hypothetical protein; CJE1432  N/A  Click
17 complement(1342415..1342678)  hypothetical protein; CJE1433  N/A  Click
18 complement(1342735..1343022)  PHAGE_Campyl_CPX: hypothetical protein; CJE1434; phage(gi371670989)  7e-08  Click
19 complement(1343075..1343806)  PHAGE_Clostr_phiC2: putative antirepressor; CJE1435; phage(gi134287384)  4e-25  Click
20 complement(1344237..1344521)  hypothetical protein; CJE1436  N/A  Click
21 1344501..1344734  hypothetical protein; CJE1437  N/A  Click
22 complement(1344518..1344721)  hypothetical protein; CJE1438  N/A  Click
23 1344926..1345579  hypothetical protein; CJE1439  N/A  Click
24 1345814..1346476  PHAGE_Pseudo_MP22: c repressor; CJE1440; phage(gi157834973)  2e-06  Click
25 1346482..1347135  PHAGE_Entero_vB_KleM_RaK2: putative nuclease; CJE1441; phage(gi422937180)  6e-12  Click
26 1347152..1347433  hypothetical protein; CJE1442  N/A  Click
27 complement(1347447..1347644)  hypothetical protein; CJE1443  N/A  Click
28 complement(1347562..1347981)  hypothetical protein; CJE1444  N/A  Click
29 complement(1348210..1348671)  PHAGE_Campyl_CPX: hypothetical protein; CJE1445; phage(gi371670943)  2e-10  Click
30 complement(1348671..1348778)  hypothetical protein; CJE1446  N/A  Click
31 complement(1348720..1350003)  PHAGE_Campyl_CPX: hypothetical protein; CJE1447; phage(gi371671054)  2e-35  Click
32 complement(1350000..1350374)  PHAGE_Campyl_CPX: hypothetical protein; CJE1448; phage(gi371670957)  5e-08  Click
33 complement(1350367..1350750)  hypothetical protein; CJE1449  N/A  Click
34 complement(1350747..1351382)  PHAGE_Campyl_CPX: hypothetical protein; CJE1450; phage(gi371670964)  2e-13  Click
35 complement(1351395..1351745)  hypothetical protein; CJE1451  N/A  Click
36 complement(1351846..1353411)  PHAGE_Human__8: LANA; CJE1452; phage(gi139472804)  4e-05  Click
37 complement(1353404..1354036)  hypothetical protein; CJE1453  N/A  Click
38 complement(1354033..1354350)  phage head-tail adaptor, putative; CJE1454  N/A  Click
39 complement(1354363..1354677)  hypothetical protein; CJE1455  N/A  Click
40 1354760..1355032  hypothetical protein; CJE1456  N/A  Click
41 complement(1354797..1355048)  hypothetical protein; CJE1457  N/A  Click
42 complement(1355059..1356225)  PHAGE_Entero_SfV: capsid; CJE1458; phage(gi19548995)  7e-30  Click
43 1370041..1370053  attR    TTTTATCTTTTAA  N/A  Click