Definition Ruminococcus torques L2-14 draft genome.
Accession FP929055
Length 3,341,681
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 51 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(87963..88862)  PHAGE_Temper_1: cell wall hydrolase; RTO_00860; phage(gi16271826)  2e-23  Click
2 complement(89389..89565)  PHAGE_Lister_B054: gp28; RTO_00880; phage(gi157325312)  9e-08  Click
3 complement(89565..89699)  hypothetical protein; RTO_00890  N/A  Click
4 complement(89715..89981)  hypothetical protein; RTO_00900  N/A  Click
5 complement(91519..93324)  PHAGE_Lactob_Lj771: hypothetical protein LJ771_049; RTO_00920; phage(gi163932148)  2e-16  Click
6 92864..92875  attL    CCAACCGTTGCA  N/A  Click
7 complement(93339..94133)  PHAGE_Lactob_Lj771: hypothetical protein LJ771_048; RTO_00930; phage(gi163932147)  4e-08  Click
8 complement(94130..95332)  PHAGE_Lactob_Lj771: element PBSX protein; RTO_00940; phage(gi163932146)  1e-39  Click
9 complement(95334..95738)  PHAGE_Lactob_Lj771: hypothetical protein LJ771_046; RTO_00950; phage(gi163932199)  1e-08  Click
10 complement(96165..96977)  PHAGE_Lactob_Lj771: hypothetical protein LJ771_044; RTO_00970; phage(gi163932197)  2e-13  Click
11 complement(96974..97144)  hypothetical protein; RTO_00980  N/A  Click
12 complement(97162..97851)  PHAGE_Clostr_phiC2: putative LysM; RTO_00990; phage(gi134287356)  8e-42  Click
13 complement(100603..100710)  hypothetical protein; RTO_01010  N/A  Click
14 complement(100791..101222)  PHAGE_Lactob_Lj771: hypothetical protein LJ771_041; RTO_01020; phage(gi163932194)  9e-05  Click
15 complement(101309..101788)  PHAGE_Lactob_Lj771: sheath tail protein; RTO_01030; phage(gi163932193)  2e-13  Click
16 complement(101806..103110)  PHAGE_Lactob_Lj771: hypothetical protein LJ771_039; RTO_01040; phage(gi163932192)  1e-33  Click
17 complement(103112..103315)  hypothetical protein; RTO_01050  N/A  Click
18 complement(103318..103752)  PHAGE_Clostr_phiC2: hypothetical protein phiC2p12; RTO_01060; phage(gi134287347)  1e-29  Click
19 complement(103749..104210)  PHAGE_Lactob_Lj771: hypothetical protein LJ771_036; RTO_01070; phage(gi163932189)  5e-06  Click
20 complement(104211..104594)  PHAGE_Clostr_phiC2: hypothetical protein phiC2p10; RTO_01080; phage(gi134287345)  1e-21  Click
21 complement(104588..104983)  PHAGE_Clostr_phiC2: hypothetical protein phiC2p09; RTO_01090; phage(gi134287344)  6e-23  Click
22 complement(105009..106124)  PHAGE_Clostr_phiCD38_2: phage coat protein; RTO_01100; phage(gi333798114)  3e-96  Click
23 complement(106151..106777)  PHAGE_Lactob_Lj771: scaffolding protein SbcC-like protein; RTO_01110; phage(gi163932185)  1e-29  Click
24 complement(107083..107292)  hypothetical protein; RTO_01120  N/A  Click
25 complement(107282..109039)  PHAGE_Clostr_phiC2: putative head morphogenesis protein; RTO_01130; phage(gi134287339)  4e-118  Click
26 complement(110826..112163)  PHAGE_Strept_SMP: terminase large subunit; RTO_01150; phage(gi119953777)  1e-108  Click
27 complement(112177..112683)  PHAGE_Aggreg_S1249: putative terminase small subunit TerS; RTO_01160; phage(gi273809571)  5e-20  Click
28 complement(112919..113359)  hypothetical protein; RTO_01170  N/A  Click
29 complement(113356..113577)  hypothetical protein; RTO_01180  N/A  Click
30 complement(113633..113923)  hypothetical protein; RTO_01190  N/A  Click
31 complement(113929..114108)  hypothetical protein; RTO_01200  N/A  Click
32 complement(114124..114291)  hypothetical protein; RTO_01210  N/A  Click
33 complement(114531..116408)  PHAGE_Lister_P40: gp32; RTO_01230; phage(gi207270806)  1e-43  Click
34 complement(116424..116948)  hypothetical protein; RTO_01240  N/A  Click
35 complement(118954..119424)  Protein of unknown function (DUF669).; RTO_01260  N/A  Click
36 complement(119448..119690)  hypothetical protein; RTO_01270  N/A  Click
37 complement(119710..121065)  PHAGE_Entero_HK629: hypothetical protein; RTO_01280; phage(gi428782051)  6e-47  Click
38 complement(121067..121234)  hypothetical protein; RTO_01290  N/A  Click
39 complement(121239..121538)  hypothetical protein; RTO_01300  N/A  Click
40 complement(121538..122272)  PHAGE_Strept_Dp_1: hypothetical protein; RTO_01310; phage(gi327198335)  9e-10  Click
41 complement(122286..122642)  PHAGE_Thermo_THSA_485A: VRR-NUC domain-containing protein; RTO_01320; phage(gi397912645)  8e-09  Click
42 complement(122643..123299)  PHAGE_Klebsi_KP32: internal virion protein D; RTO_01330; phage(gi281416314)  4e-05  Click
43 complement(123329..123544)  hypothetical protein; RTO_01340  N/A  Click
44 complement(123522..124877)  PHAGE_Entero_phiFL4A: DNA helicase; RTO_01350; phage(gi281416462)  2e-25  Click
45 complement(125996..126898)  PHAGE_Salmon_SPN19: hypothetical protein; RTO_01380; phage(gi414090156)  3e-50  Click
46 complement(126898..127308)  Helix-turn-helix.; RTO_01390  N/A  Click
47 complement(127354..127557)  hypothetical protein; RTO_01400  N/A  Click
48 complement(127789..128343)  hypothetical protein; RTO_01420  N/A  Click
49 complement(128343..128786)  hypothetical protein; RTO_01430  N/A  Click
50 129521..129910  PHAGE_Clostr_phi3626: putative CI-like transcriptional repressor; RTO_01450; phage(gi20065987)  6e-09  Click
51 130152..130703  hypothetical protein; RTO_01460  N/A  Click
52 130722..130733  attR    CCAACCGTTGCA  N/A  Click
53 130843..131859  PHAGE_Strept_P9: integrase; RTO_01470; phage(gi157311136)  1e-08  Click
Region 2, total : 35 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1905618..1905649  attL    CCCTAGACAGCTTTGAACTTTTCCCCGGAATC  N/A  Click
2 complement(1905717..1906841)  PHAGE_Strept_MM1: integrase; RTO_18150; phage(gi15088744)  2e-33  Click
3 complement(1907027..1907644)  PHAGE_Clostr_PhiS63: gp22; RTO_18160; phage(gi388570651)  1e-20  Click
4 complement(1907601..1908407)  PHAGE_Mycoba_Myrna: gp260; RTO_18170; phage(gi203454821)  9e-06  Click
5 1908566..1908688  hypothetical protein; RTO_18180  N/A  Click
6 complement(1908685..1909071)  PHAGE_Clostr_phiSM101: Helix-turn-helix domain protein; RTO_18190; phage(gi110804036)  1e-13  Click
7 1909222..1909374  hypothetical protein; RTO_18200  N/A  Click
8 complement(1909508..1909900)  hypothetical protein; RTO_18210  N/A  Click
9 1909994..1910335  hypothetical protein; RTO_18220  N/A  Click
10 1910350..1910502  hypothetical protein; RTO_18230  N/A  Click
11 1910499..1910651  hypothetical protein; RTO_18240  N/A  Click
12 1910648..1910854  hypothetical protein; RTO_18250  N/A  Click
13 1910882..1910977  hypothetical protein; RTO_18260  N/A  Click
14 1911012..1911773  PHAGE_Clostr_PhiS63: gp31; RTO_18270; phage(gi388570658)  7e-10  Click
15 1911777..1912217  PHAGE_Salmon_SSU5: putative ribonuclease H; RTO_18280; phage(gi410491500)  3e-11  Click
16 1912220..1912708  hypothetical protein; RTO_18290  N/A  Click
17 1912705..1913289  hypothetical protein; RTO_18300  N/A  Click
18 1913286..1915424  PHAGE_Strept_3: hypothetical protein SpyM3_1130; RTO_18310; phage(gi28876300)  5e-11  Click
19 1915424..1916728  hypothetical protein; RTO_18320  N/A  Click
20 1916741..1917100  PHAGE_Lactob_c5: hypothetical protein; RTO_18330; phage(gi418488180)  1e-07  Click
21 1917878..1918258  hypothetical protein; RTO_18360  N/A  Click
22 1918230..1918361  Helix-turn-helix.; RTO_18370  N/A  Click
23 1918963..1919274  Protein of unknown function (DUF1492).; RTO_18400  N/A  Click
24 1919310..1919738  PHAGE_Lister_B025: gp65; RTO_18410; phage(gi157325282)  5e-18  Click
25 1920289..1921962  PHAGE_Staphy_2638A: ORF005; RTO_18430; phage(gi66395455)  1e-97  Click
26 1921977..1923134  PHAGE_Clostr_phiCD6356: putative phage portal protein; RTO_18440; phage(gi326536850)  2e-22  Click
27 1923204..1923962  PHAGE_Lactob_JCL1032: putative ClpP protease; RTO_18450; phage(gi418489116)  6e-22  Click
28 1923976..1925124  PHAGE_Clostr_phiCD6356: putative major capsid protein A; RTO_18460; phage(gi326536852)  5e-33  Click
29 1925145..1925435  hypothetical protein; RTO_18470  N/A  Click
30 1925416..1925787  phage head-tail adaptor, putative, SPP1 family; RTO_18480  N/A  Click
31 1925765..1926097  hypothetical protein; RTO_18490  N/A  Click
32 1926094..1926468  phage protein, HK97 gp10 family; RTO_18500  N/A  Click
33 1926480..1927097  PHAGE_Bacill_BtCS33: major tail protein, phi13 family; RTO_18510; phage(gi392972719)  1e-07  Click
34 1927102..1927506  hypothetical protein; RTO_18520  N/A  Click
35 1927499..1927603  hypothetical protein; RTO_18530  N/A  Click
36 1929746..1930444  PHAGE_Clostr_PhiS63: gp14; RTO_18550; phage(gi388570643)  3e-17  Click
37 1939460..1939491  attR    CCCTAGACAGCTTTGAACTTTTCCCCGGAATC  N/A  Click