gi|291548560|ref|FP929055.1| Ruminococcus torques L2-14 draft genome. [asmbl_id: NC_000000].3341681, gc%: 40.14% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### complement(87963..88862) PHAGE_Temper_1: cell wall hydrolase; RTO_00860; phage(gi16271826) 2e-23 MDKQTFISQIAAYVIKYAAQYGIKVHSPIIAQAILESGWGQSSLAAKYHNYFGLKCGSAWTGKSVNMATSEEYTPGVHTNIRDNFRVFDSMEDGVKGYFDFINYSRYANLKGVTDPQTYVENIKADGYATSSTYVTNLMRVIRDNNLTQYDGAAQQTPSKSVDEVAQDVVNGKYGNGADRKAALEAAGYNYDEVQAKVNEILGVDTTPKKSVDEIAQEVINGAWGNGQDRKNRIEQAGYDYTAVQNKVNELCGTPKKSIDEIARAVIRGEYGNGADRKNRITAEGYDYAAVQARVNDLM complement(89389..89565) PHAGE_Lister_B054: gp28; RTO_00880; phage(gi157325312) 9e-08 MLFQFIIKILFRKDVESMAVIYATLIIKGKKTFADVPEKIKDKVKEVLIDLDCPELAE complement(89565..89699) hypothetical protein; RTO_00890 N/A MANIYAALIIKGKKSINDVPDKIRDEVKQVLIDEGHPELAEGGN complement(89715..89981) hypothetical protein; RTO_00900 N/A MKEYGKVRSTKQPEQKVIDDYSVWIAENITPVTEAGTDEQPGFTGYEYDLTQYTKDEYIKMIDDRNASLEDQMTQAQEAMCEIYEMMA complement(91519..93324) PHAGE_Lactob_Lj771: hypothetical protein LJ771_049; RTO_00920; phage(gi163932148) 2e-16 MAEYSKLYITNNGQALVAKMIAGSGNIDFTKVCSSSTQYTESQLQALTALSNIKQTTLVSKVTRTNEVAIKIDAAYSNVDLKEGYYMRTLGLYAVDPDKGEILYAVCIEKSNNCYMPPYNGVTVSAAYLQLYTTVGNADNVSLAVSPGAYATVGDIQALEKEIADLKAFVGYSDGDIYGVEVDFENKKFTRLAGAVNRSAGSGFDGINAFGGRKRCNLTNDGRVAAYYGEAGFSTTGKLTQAVDRNPVGTESPDENLKFSAGTIVQVMVEQPKFYYKVVPLKTEKRTKGAITRKIRYYVSDTPKAGFKLHPAFIVNGQENDVAYLAAFEGSLWDASASAYILDDSQVADFAADMLCSIANAKPLSGLTQNATRANIRKLAEKRGTGWEQGVVQTASASQMLMLIEYATFNMQSVIGNGAVSKTDDGKTSMTENTGATITLGNASGSVVNANGIQIVSYRGEENFWGNIWWWIDGINHYANATTGECDTYVADHGFTDDSKAAPYEDTGMCAKYGNGYISAFCYSEDFDWLFLPGEFNGNTALPVGDYCWNQNGTGWRVAKLGASWVDGLSAGAFYWALSNASSHRHRSVGGRLVYRKKVAA 92864..92875 attL N/A CCAACCGTTGCA complement(93339..94133) PHAGE_Lactob_Lj771: hypothetical protein LJ771_048; RTO_00930; phage(gi163932147) 4e-08 MIREVDLVSYLPPFMQSYKEPVAALEAENPEFSLMWSATDRCLRNRFISTADEYGISRFEKMLKIYPTADDTLESRRSRVQSKWFNTIPYTWKVLLQKLLVLCGDSDFEVTGDFKTGYTLYIDTDLELYGQVEELENIINTMIPENLVVVSKNSIPCNIKGAVLFGGGICFINEFIITNDFREVFNVNGSSVFGGGIVQTEMLNITNDSQETVSVQGTVNFGGKATDTAMVTISTDFNETIRADMDAKAASGVVQVDFIEIKTT complement(94130..95332) PHAGE_Lactob_Lj771: element PBSX protein; RTO_00940; phage(gi163932146) 1e-39 MYEDQTYDIILERMMNRVSDKIDKRPSSPVYDLHSSTAIEFQILYIELEYLIKNSYGDTAAREFLILLAKDRGLSPEPATKAILQGEFTPTNIDVTGKRFNIGEINYIVTEQITPGTYKVQCETEGVVGNQYLGDMIPMEYIDGLQTASLTSVLIPGEDKEDTEVFRQRYFDSFNEQSFGGNHADYMAKVKGIEGVGSCKVKRVWNGDIRPADMIVSTVVKNWYESIISTVPAAVKPWLDAVYNAAKDKKLTVGGTVHVVITDSDDYGEASSTLVQYVQQTLDPEENAGEGYGLAPIGHVVSVASASPVSIEVKTTVTFEEGHNWSNTKAAIAEAVDAYFLELRKNWSETSQTIVRVSQIENRILGVDGVVDVTGTKLNGTASNMTLTEFCIPKLGGVSA complement(95334..95738) PHAGE_Lactob_Lj771: hypothetical protein LJ771_046; RTO_00950; phage(gi163932199) 1e-08 MIPSTVGFLDQDFEIETQPSLTYKMDLDGDSVRGLVDEQDAMKQMIFRTLQTERYQYIIYPWYYGIETLDLYGEPVTWVCPELERRISEALAVDERITGVTDFEFDLTVKGVVHAYFTVKTIYGDIKAEKGVKI complement(96165..96977) PHAGE_Lactob_Lj771: hypothetical protein LJ771_044; RTO_00970; phage(gi163932197) 2e-13 MKVDGDNVFFGFVFKQQRTKDKIITVTAYDQLRYLKNKDTKVYEGKTANQFVKMIADDYALNLGTLDDTGYVIESRVEENTSLFEMIANALDLTLTNTGEMYVLYDDFGKLTLKSLSSMYVGVPGAYLMIDEETGQNFDYTSSIDENTYNKIKLTYDNKDTGKRDVYITQDSSNINKWGILQYFDTLQKGENGQAKADALLKLYNKKTRNLKITNALGDNRVRAGSMVVINLDLGDVKLKNWMLVEKCKHTYKEGEHWMDLTLRGGEFVA complement(96974..97144) hypothetical protein; RTO_00980 N/A MYVELLVGNESGTKVYQPVVQEGIEWSTERKTPPANWFSKSCMTTFLIFQKVVQSG complement(97162..97851) PHAGE_Clostr_phiC2: putative LysM; RTO_00990; phage(gi134287356) 8e-42 MARSGYDMYFDKCLFPVTPEKISIKINGNNKTVNLINEGEINILKKAGLTDIEFEAEIPQVKHPYAVYKNGFKEAGYFFDIFEGLKTGKKTFQFIVCRKTPVGKKLLNTNMKVSLEDYKISEDAKNGFDFKVKFNLKQYRDYGTKTVNIKIAASKPKASAEPKRETNNSPAPAAAQTYTVVRGDCLWNIAKRFYGSGAKYTVIYNANRGVIGGNPNLIYPGQVLTIPAA complement(100603..100710) hypothetical protein; RTO_01010 N/A MDEQEKAFVIASIELKAEHDKKEKKKAEARAKKKH complement(100791..101222) PHAGE_Lactob_Lj771: hypothetical protein LJ771_041; RTO_01020; phage(gi163932194) 9e-05 MSKFSRFMKANKIAKPNEKYAPTTTLQDENGKPLEWEFKQITSKENEALRDSCTIEVPVKGKPNLYRPKVKTAEYLAKMIVASTVYPDLYDKELQDSYGVMTPEELLYAMVDNAGEYQDFTMWMQKFQGFTKNLDDKVDEAKN complement(101309..101788) PHAGE_Lactob_Lj771: sheath tail protein; RTO_01030; phage(gi163932193) 2e-13 MPNVTMKARDTIAAKLAECFITIGSRRYNFMQMIDMEAKVEKTKTTVPRLGAIMAGHKSCGMEGTFSGTAHYNQSVLRQALLDYKNTGEDVYFEMQITNDDPTSDAGRQTIIFYDCNTDGGVLAKFDADGEYLDEEIEGTFEDFSMPESFANLTGFLTN complement(101806..103110) PHAGE_Lactob_Lj771: hypothetical protein LJ771_039; RTO_01040; phage(gi163932192) 1e-33 MALGGGTFTSQNKELPGAYINFVSAASASAALSDRGIATMPLELDWGVEGEVFEVTNEDFQKNSLKLFGYAFDSPKMLGLNDLFMGAKTLYAYRLNGGGDKAANTYATAKYCGVRGNDLKIVIQKNADDASKYDVTTYFGTVKVDTQTVAKAADLVANDYVTFKAADLAVTAGTPLTGGTNGTVDGTAHQAYLDKIESYTYNTMGVVVTDDVTKKLYVAFNKRLRDELGIKFQLVVYNLSADYMGVISVKNKVTDTGWSEAALVYWVTGAESGCAVNKSCQNKKYDGGFTVDTNYTQNELKAAIKAGEFTFHKVNGVVRVLEDINSMVTTSDTCGDVFKDNQTIRVIDQLGNDDAVLFNTKYLGVVPNNASGRTSLWSDLVKIRTQLQELGAIEGFTDSDVTVAQGDSKKAVVITSAITVVNAMGKLYETVTVA complement(103112..103315) hypothetical protein; RTO_01050 N/A MAAKKTATGTAARSEQTEPMFSKEQILASARFANRRDLVDALLDEDKSYTMKTVDNLVEKYMKGQVK complement(103318..103752) PHAGE_Clostr_phiC2: hypothetical protein phiC2p12; RTO_01060; phage(gi134287347) 1e-29 MINSIVEAISCSLNKEFGDDYEIHNEEIKQGLKEPCFFIACLNPNNNLFLGKRYERTNQFCIQYFPQSAKKQRECADVAERMYDCLEYITTDGDTKPIRGSKMNHQVVDGVLNFFVNYDFFTVKTEEQTPMETMTASTDVKEGG complement(103749..104210) PHAGE_Lactob_Lj771: hypothetical protein LJ771_036; RTO_01070; phage(gi163932189) 5e-06 MGRMGRFDCKGLKDFQQQLGKLQNPDDFVESCAKELAARLLRMVVKRTPVGQYPASSGKKGGTLGRGWTGEKRASAQGYADSLTVNHFGDTYVIEIVNPVEYASYVEYGHRTANHSGWVKGQFMMTISEQELQRIAPKVLENKIKKYLGGLGK complement(104211..104594) PHAGE_Clostr_phiC2: hypothetical protein phiC2p10; RTO_01080; phage(gi134287345) 1e-21 MVKQIQAAQKAARKAIEATYFGTLTVTELQKVKNEKSKLMEESEVVVLQDQPCRLSFEKLQTAIQSESAATITQSTKLFVSPDVTIKAGSKLTVTQDNVTTDYTRSGVPSTYPTHQEITLELFKEYA complement(104588..104983) PHAGE_Clostr_phiC2: hypothetical protein phiC2p09; RTO_01090; phage(gi134287344) 6e-23 MFDTDTVKERLKSLGYEVKADEEFALTFCVEKVRSTIKNEINWNDVPEGLEHIAVDMAVGEFLLSKKTFAPDDLTGFDLEYAVKQIQTGDTNTVFATGEGSMTPEQRLTSFINYLLSYGKAEFNSFRRIRW complement(105009..106124) PHAGE_Clostr_phiCD38_2: phage coat protein; RTO_01100; phage(gi333798114) 3e-96 MAKFDAKSFNEKAFGKYMSAIPNVKLNKLRESRAIVGDARLRDTFVNNSQTGTVYAVLPFFGLLSGTPQNYDGVDNVTPDKTDTFEQGVFTYGRMNGWTEADFSYDVTGGTDFMANVRSQINDYWNSVDQDVILAILKGVFGMKDTGTGDIKKSNAAFVEAHTYDIAQAGAEHTDDTMKMDATTLNSAIQKACGDNKQKFKLVYCHSAVATNLENLKLLAYLKYTDAQGIERDLEMGTWNGRLVIIDDSLPTKVVEAVAEDTGKGIKAQDAYTEYTTYILGEGAIGFEDVGAKVPYEMVRDAKTRGGEDTLISRKRHAVSVSGVSYLKADQKTNSPTNTELGNGKNWSLVASDTKTIEHKAVPIARIISRG complement(106151..106777) PHAGE_Lactob_Lj771: scaffolding protein SbcC-like protein; RTO_01110; phage(gi163932185) 1e-29 MTRKQLENLGLTKEQADSVMKINGDDIENAKGTASTEIKNLQTEVEGLKTQVGDRDKQLETLKASAGDNADLKKKIEDLQTENATAKATHESELNQLKIDFAVEKALTGAKAKNIKAVKALLELGEAKLDKDGNVKGLDEQIEKLRSGDDTKFLFEAQKQQKQQQNFKGFQPGASGEKKPGEGETVDFSKMSYDELTAYMEANPDAQI complement(107083..107292) hypothetical protein; RTO_01120 N/A MSSNWYKNNETDQIWWKDTPDSVGEWLFSFDKKQVFNMFADYPHNLTPEQKKIFDEENPEWCEFFKDRV complement(107282..109039) PHAGE_Clostr_phiC2: putative head morphogenesis protein; RTO_01130; phage(gi134287339) 4e-118 MNNGEYWQKRFELLEQAAHQQGVQCYADIEKQYRQAQKQLEGQIAAWYQRFASNNGVTLAEAKRMLNAKELAELKWDVNQYIQYGQENAINGTWVKQLENASARFHISRLEALKLQTQQSIEVMFGNQLDSIDSTMRNVYKSGYYHTAYEIQKGVGVGWDFSALDDKQISKVINKPWAVDGKNFSERIWGNRQKLVNELNNTLTQNIILGKDPQKAIDEIARKMNTSKTNTGRLVMTEEAFFSSAAQKDCFTELDVEQFEIVATLDSHTSDICRGMDGKHFPMSEWKVGVTAPPFHVHCRSTTVPYFDDEFDAVGERAARDEETGKTYFVPGNMTYKEWEKAFVNGDKSGLQAVNSDDTIKEKEPSEAFQQIQKACEADKVEHRPVQKLSQPLSSDEIIERLAGGDMTKGSCSSLAFAYIGNRNGLDVLDFRGGSSQYVFSMNSNIKKILELPGVNGSITMVKKEISGTMEVLNNLVLNKEYYLATGKHAAIVRRVDSGVEYLELQSKFQNGWMPFDRYGSMAATLNKRFGCRKTVDKQFGKVWEKSVVLMDVESFNENTEFEQILGYINTAVESQKKGVTGDVK complement(110826..112163) PHAGE_Strept_SMP: terminase large subunit; RTO_01150; phage(gi119953777) 1e-108 MVKNRISSQYVFGYQKFILYPEDYKATKSGKKKVLLPELVGKGYGTFWRWKGRYRVCKGSRASKKSKTTALWYITNMMKYPQANTLVVRKTFRTLKDSCFTELKWAIHRLGVDAFWEIKESPLEMTYKPTGQKIYFRGLDDPLKVTSITVDIGCLCWMWIEEAYEISSEDDFNMLDESIRGAVPDGSGLFKQITLTLNPWNEHHWIKKRFFDNTDDETLAMTTNYKCNEWLDKADLKVFETMKKQNPRRYKVAGLGDWGIVDGLVYENWEEKAFSVDEVKKIAGVKSVFGLDFGYTNDPSALFCGLIDQSSKTIWVFDEMYQPGMSNEAIAEQVQRMGYVKEKITADSAEPKSIDRLRELGLKGIRKARKGKDSINNGIDFIQDYHIIIHPRCVNFITEISNYQWDKDAKTGKKLNRPIDDFNHLMDAMRYAIEQMAKGDAFSFD complement(112177..112683) PHAGE_Aggreg_S1249: putative terminase small subunit TerS; RTO_01160; phage(gi273809571) 5e-20 MAKTTKLTEKQQRFVEEYLIDLNATQAAIRAGYSAKTADQQGSRMLANVKVQQAISVAMAERSKRTGINQDRVVLELARIAFVKMTDLVDSHGRIKDNATDDDLACIESVKYKQSESETGSSVEREVKISPKLKALELLGKHLGMWNDKIDVNITQPIVITGEDALED complement(112919..113359) hypothetical protein; RTO_01170 N/A MKTLSAREYLGQLQELDTNINQDLERRDDMKINACSTGAIDYSAERVQTSPSGDSLCKAVTNYVAFNDEINAEIDRFSDAKEQIIKQIRGLHNARYSQVLFKVYVQFKSLKVASGEMGMSYQYVRNLHKKALTRFEETYDDLHYLT complement(113356..113577) hypothetical protein; RTO_01180 N/A MRFVTVVTVKCNFLIIFIISIFYVFIKSKNIEYKSLTVTVTNRYRQYLQGFQDIFCQFSTVTKPIPRKGQVKE complement(113633..113923) hypothetical protein; RTO_01190 N/A MIMENKILELLEQKGSVSMNDDIFPLVEKEFEGQVIGAELYELAHQYISQLLYGVHTAGVAVIAVPKFAAGQQFGQMVVADVIYTKVNDTPYDFMQ complement(113929..114108) hypothetical protein; RTO_01200 N/A MYDEQEDAAQLEWCRQWSEEHKKKMTRKMQKKIRRVQHWCNCKLYVKYAWYEFRAMVKG complement(114124..114291) hypothetical protein; RTO_01210 N/A MIEKIKKFIRIITILLMTALVIFLIYTVFKYEWKNILCFVSVITVFLIICWAFDW complement(114531..116408) PHAGE_Lister_P40: gp32; RTO_01230; phage(gi207270806) 1e-43 MLYKGYVETKGKASIEKLKNRTTWKTYDEVKNLNGFGGVLADDTILIDIDDSDQSEILMNIVEELQLDCKVLCTSRGKHFLFKNHTIARNRTHVQLAVGLTADIKVGSKLSYEVIKIDGEERFCEWDIEEGGKYQEVPKWLFPVKATADFVDMDAGDGRNQALFNYILTLTANDFTVEETRECIRILNKFVLKQPLSDDELEVILRDDAFQKPVFFLGSTFLFDKFAVFMKNTAHVIKINGQLHIYKDGVYSNGYKEIESNMIQHIPNLKKMQRREVLDYMELIVDEKEQSDANLIAFNNGIYDLVTGELKPFSTDIVITNKIPWDYKPDAYSELADSTLNKLACGDAAIRALLEECIGYCFYRRNELGKAFILTGDKSNGKSTFLDCVKAILGDRNISALDLKELGDRFNTSMMFGKLANIGDDIGDDFLQGSQVSVFKKIVTGNRIKAERKGQDPFEFNPFIKLLFSANDIPRMKDKTGAVLRRLVIIPFNATFSKDDPDYRPFIKYELTQQDSIEYLIRLGVEGLKRVVINNGFSKSDKVQNQLDEYEQENNPILAFINDTGVDMIENEPTADVYKRYQVFCADNAMQPMSNIVFSKQINKRLGFRVIQKKVNNKNCKIFVS complement(116424..116948) hypothetical protein; RTO_01240 N/A MDLEIRYENGSMMVHLEEFLNIRSITKVRKLLKLIRSSFNPECEQQIKEFVQEQTEQFEQVQKEHSIYIEGYTQKVKYAEQQIMQTKHCISQIQTGVKNSQLLRDSHRKNTKVWKDRNADVKKYRERLKEPRNTLKEQKKELKELKFLLRSRQQSFDRNIRNKDFYKKVLENIT complement(118954..119424) Protein of unknown function (DUF669).; RTO_01260 N/A MAIDFSAFDEKVDLQELQNEVQNAPDNDFADVPDGTYIISIEKMEIKLTKAQDKLMFAVQAKIKEGEQANRMIFFNRVISGNSSAKWTDGQAIKSVCTWVNKLIAEDDTPVEFVNYADFADQILDVFQSIQGAIEVEVDYKADAFNPITIKEVFDC complement(119448..119690) hypothetical protein; RTO_01270 N/A MNNTFGLPDDLFGAILASAIAEGMNPANNRTMKKPNPEASKQNATPEDGAKAAKKIYDSYVAAGFNEVQAFELLKLVLSK complement(119710..121065) PHAGE_Entero_HK629: hypothetical protein; RTO_01280; phage(gi428782051) 6e-47 MAQMLLIMGESGTGKSTSMRNCDPATTAVVNPVGKPLPFKGKFTMLNSEVESRKICKFMKEQVAAGKKLLVVDDFQYILSVPYMNRIKENGWDKWNDFGANYFEIIEVCKELPDDVVVAYMTHTETLENGVTTIKLIGKLLREKITIEGLFTIVLRTGVNEGKYYFYTQNSGKDTVKSPMGMFPAYAIDNDLNYVADKIRNFYEVGEYKTDAEMGQADAQAASDLEKPDANGRRARGGKKTTTEDAAPKTGRTARKTHDEVVAENNQKMADYMAERDKAIDAVADGREEIPFDEACAAADSVPQPELETPPRRTRKERKSAEQSEPVQDGTTNTDSESVTLDADTYFYVPADDNYVMKHKGDTVDLIVDGVEVMKVISKEEFGEGVKRLAQADNPKPENPIDGAMNPPEKGRRTRRSAAQAQPDNADAAADETPAVDEQPTGRTRRVRKTR complement(121067..121234) hypothetical protein; RTO_01290 N/A MVNERQGKVYNPRPVYNRKLLRSVIRAGVQKQFGQHHVSANMAGNFEKIRKEQVK complement(121239..121538) hypothetical protein; RTO_01300 N/A MDKRDKKIRQLEDERNRLMTENQELKYIINDIQSVNDIMREDIEKECAAECGCIVIEGSRTSAAYQDLVGILLANNYSVEVIPMDERRKLKIIIKESEV complement(121538..122272) PHAGE_Strept_Dp_1: hypothetical protein; RTO_01310; phage(gi327198335) 9e-10 MAAKKKADAAVENTAEVTQETTEQVQDTVEQMTEDNKKELDNKKFVVDHLLSTKREGMEDLIAYMEEIGFFEAPCSGGNHLACQFGLVHHSRNVMMAAENIGYALLGKVKYAEIRNSVIIAAALHDLGKCGDFGKQMYVPNMIKDGRPTKAEPEQKYKQSESKPFKRNPALLPLDHATRSIKLATLFIDLTEDEEFAIRYHDGLYESANYAVKGNETPLYLILHYADLWSSRVTEGSTDEGSEE complement(122286..122642) PHAGE_Thermo_THSA_485A: VRR-NUC domain-containing protein; RTO_01320; phage(gi397912645) 8e-09 MAAEKNFENKVKAFLKDTGAWLLKYWGGAAYTKSGIPDLLVCSDGCFLGIEVKAPNGEPSLLQLVNLKKIRESGGYGILLYPKDFEQFKMFIAKKSELNAWYLSNIEDQKRWEIKLSK complement(122643..123299) PHAGE_Klebsi_KP32: internal virion protein D; RTO_01330; phage(gi281416314) 4e-05 MVKRVMILIGVALGVGLVIGNVSGYALKTHITAKDKQKTEEQTLERSSTKTLVYGAYDDRTFTQEISLDWGAGDLDFTPLDCKMPEEQQEFTYYLCTGYNIDFTLVMALIQNESSFDPAVISKTNDYGYMQINQINHQWLTDTLGVTDFTDPYQNIRAGVFVLRKLYERYQDTNMVLMAYNMGEDGAARLWEKGIYSTDYTEKILNYQTQFNEQLGGD complement(123329..123544) hypothetical protein; RTO_01340 N/A MNYSKILNWIFGIMAFIGVFLIIGAVGASDYAVEMGIYEPLTAHLKEYIIGAILIIPGIIYLKITERGDEN complement(123522..124877) PHAGE_Entero_phiFL4A: DNA helicase; RTO_01350; phage(gi281416462) 2e-25 MNDLHLMPHQEDALNRTEQFNRCAYYLDMGLGKTFVGAEKMYLLNNAVNVVICQKSKIDDWVQHFKEYYPSDHVMNLTKKSEAINFRTLVDTKELYNKDVQIIGVINYETAFRRDWLLKFKGFTLMLDESSLITNETAKRSKFILKMQPESVILLSGTPTAGKYERLWSQVQLLGWNITKKAFWSSYVQTEWVENGDGFKREVITGYKHTEHLKKKLADHGCIFMKTADVIELPEQTEQKIFFKVTQAYKYFIKNSYIMLDTLNMCKFKDDSDYYGTDVTPRVELVGDNSLTKMLYARQLCGQWHKEKLEGLRDLVESTEDRLIIFYNFTAELEAMQKKLADLNRPYSVVNGSKKDLTAYDQADDSITFIQYQAGAMGGNYQKANKIIYFTLPLGKGSCDMWEQSKKRIHRIGQAKPCFYYYLLVKGTVEERNLAALKEGKELTDELFKNT complement(125996..126898) PHAGE_Salmon_SPN19: hypothetical protein; RTO_01380; phage(gi414090156) 3e-50 MPKIEYKSIKFQQKSLELINLVNQVVEEYQAQGYELTLRQAYYQLVARGYIPNNERSYKNIGNLINDGRLAGLIDWHSITDRTRNLRSNSHWDNPADVIASARYSYLLNKWDGQPNYVEVWVEKDALVDIVGQACRPLDTPYFSCRGYTSQSEMWSAAQRFISQDYRDNRVIIHLGDHDPSGIDMTRDIQERLQMFGADVYVKRVALTMNQIGTYNPPPNPAKITDSRASKYIDEYGNESWELDALEPQVITDLITNEVTALRNDEIYRSVCDSEERGKDELKMIERNYDKAVAFLESEE complement(126898..127308) Helix-turn-helix.; RTO_01390 N/A MKFSEKLKQAMQQLGINQAQVVGLTGKSKGSISMYLNDKTTPSEQVQSDIAVSLGLTPDYFEQEETPVTFKPSKCEDGIPTLTVHEVAKLMHKHTNTIALGLQQGVFPWGYAIHTSEHRWSYFINAKRFAEIEGVI complement(127354..127557) hypothetical protein; RTO_01400 N/A MTNTELLREKINASGYKLQFVAEKCGLTYFGLMKKVNNETEFKASEIKALKDLLNLTDDDATKIFFA complement(127789..128343) hypothetical protein; RTO_01420 N/A MSVFKKYDYWSILESLDTMTEYDYNGNVNDSIYYDFYQEQITELCVIAADMYNELDGIKSKLWYEMPEKHIEFCDEDTCTQTAIAWWNTAACMLSDIDMGTLLENENIYAANEEYEKMKRIRALERLTKKQYITLNTLVIGFITRWLELVSAFDVISSCIRELEYHQSAVQNKSGVNLPDAAYL complement(128343..128786) hypothetical protein; RTO_01430 N/A MTVKSIQEAWDEVNKIFPYDYEKNETASKNAGYPIYYSTTSDHQNNWISDLGNRLEVNFEDGRSVNVWVNSEEYHHFEVTVSGKSHNFSYVCSTIYEALDAVVDAGITFNFDVDTTELMLKLASMETDKLISFETHRFGVRRKPGEV 129521..129910 PHAGE_Clostr_phi3626: putative CI-like transcriptional repressor; RTO_01450; phage(gi20065987) 6e-09 MTIGERIKARRDELGMSQEELAHKIGYKSKTSINKIELGIQELRQSKIKQIADALQTTPAYIMGWKETEEDQQLKKCRELFKKCHGSDAYDVVSLYLTLDESDKNVVKTMIESLLSAEKYSVKKESLNA 130152..130703 hypothetical protein; RTO_01460 N/A MKKVIKLVVLAIVVIFVIMVVKDISKNPIQKKETSSEEIPVILDANTYSRISSEKLVELLGEPKSTEDWNNKNSKGTFQMQLYTYDLDGMYSEFILYEDAVVKIRCFATEPWEIKKDFDNVFKMFNITVKDSARKVVDTGVTYKFSPVSDTVAEFEVYNFDSEKHTFDSVYITYNLNYFDDPN 130722..130733 attR N/A CCAACCGTTGCA 130843..131859 PHAGE_Strept_P9: integrase; RTO_01470; phage(gi157311136) 1e-08 MGRRNPNGYGCVTKLKGNRSRPWLAKVTIYDEQGHAKQTPIGYAETEEKANILLAEYNNNPWDIDREKVTLVVLYQRWSEIKLPKLGKSNQQSLRSAFKHCSKYYGVKYRSLKSYQMQDCIDNCGCGYSTQWSIKNLFGHLDRFAFEIDLIDKMYSQITTAPPIPETTREPFTQEQIDALWKIKDDPWVNTVLIYIYTGFRLQELLGMKTEQVNIKDWYFEGGIKTTAGKCRIVPIHDRIKPFVKALVDEGNKYLFTYQGKKFSQANYYKCWGEVMEKIGADKTPHEARHTFETNLDNAKGNRKCIDMLMGHKSKDVGNRVYNHKTIEQLRETVALLK #### region 2 #### 1905618..1905649 attL N/A CCCTAGACAGCTTTGAACTTTTCCCCGGAATC complement(1905717..1906841) PHAGE_Strept_MM1: integrase; RTO_18150; phage(gi15088744) 2e-33 MYSQKQPNGKYRFYESYEDYMTGKIKYVSCTLDSNSKKNQKEAFVILQNKIEQIYANTLTQKPKNISMSKLVELYLISQKQTVKLSTYNRNCHSCNTLIAIIGAETNVNRLSAAYIQKQLLDTGKEPGTLNEHLVRLKALLRWGYKHDLIQSLDFLNKLERFKDVPHRVKIEDKFIESSDLALLISGMKVDTWIDLTKFLALSGLRFGEAAALLFDDVDIKNRVIHVTKNYDYINHVTTSPKTLTSLRDVYMQDELAVLCRKLKAASFATFAMQDMNAQKLLFCDSNGEHIKYYAYNKYFRENTLRVLGKAYTVHSLRHTHASLLLEQGVDVDSISRRLGHSDSAVTREIYLHITKKKQNQENLKIKELKLIAQ complement(1907027..1907644) PHAGE_Clostr_PhiS63: gp22; RTO_18160; phage(gi388570651) 1e-20 MKVGMRTPSLKKSVKAQTTGKVKRVVKKSVSPGYGQKGVGWIKDPKKAAYNKVYNKTTFGASDVYRGISGTGSHSSSNSSFSGSAVEIPEVRIPSKLEKMLTSSEKKKYISLVQTGCVLDQDRDAIIKANGKRTKISTFSLCRIIAMIMSVVLLAFGLAGLSTSVGIGAFFIIFGALFFLMARSFKTTITLHKKIFQIKDDGFIS complement(1907601..1908407) PHAGE_Mycoba_Myrna: gp260; RTO_18170; phage(gi203454821) 9e-06 MKHKERLSVLYDLLFSVLAIVAVYFAIYDMTTGCSAIQRDIDFVINTIFIADYALRLLIAKNKKEFFRNNILDLIAIIPFNSLFKVFRVFKVFKMLKLLKLAKASARFARLYKHIKFFFDLNGFKYMVGATLICIAIGGISIHYAEGMSFSDGFWWSFVTATTVGYGDISPSTIPGRIIATVLMLVGIGLIGSLTSTITAVFFQKTTDKEKSTAKDILISSIQRQLNNFDELSDDDIQAICKTLQCLHEGKGDNDESRNENTELEEKC 1908566..1908688 hypothetical protein; RTO_18180 N/A MNNVSKQLIIGMVKKIDDSDEKFLRQLYTILKRHLERGKH complement(1908685..1909071) PHAGE_Clostr_phiSM101: Helix-turn-helix domain protein; RTO_18190; phage(gi110804036) 1e-13 MNERIKKLRKVLKLTQQEFAESIKVKRNTVATYEMGRSIPSDSAIALICKTFNVNEEWLRSGAGDMFLELPEEDEEAAYVSELLEDSDNDLYKLIKEIMHTYHELSPKSKEVICDFSAKLRENIKKGS 1909222..1909374 hypothetical protein; RTO_18200 N/A MSEEQKKLIEETVENLKHLDKESLLVVKGSVEVLKARDAMEKDGPEKKVG complement(1909508..1909900) hypothetical protein; RTO_18210 N/A MKFDFTVTITAILGIAAVISPIATAIINNLYQLKVKKLELEQNHKDKTTYYVRSIFENYLRYTGKCINRMISETEGNYGEYYFLALTYSPSYIADALISINASIHNGDLESATSQLEQLRPQIAELLQSL 1909994..1910335 hypothetical protein; RTO_18220 N/A MQKAKEFFKINEKGLNFLMKVSDLAKMDNVSTRTICRRAEEIEQLIPIRYPEGSVIYHGNRKSEIDLYVYQDYKRQRGKLMNPLARKYVEPYSANEMALICPVIERVVVMTED 1910350..1910502 hypothetical protein; RTO_18230 N/A MYIITAKHKGNKITRKAFSDTQASAIINRLLREGCTEIGIKEENHTEGEK 1910499..1910651 hypothetical protein; RTO_18240 N/A MSQKRGRREKDHIWIIRWTKTQELGCCSGTWEEANEYARKKNKGEYIILE 1910648..1910854 hypothetical protein; RTO_18250 N/A MSLWRTRFITGVGMLVGLFYASGAAITYSVSVKAPESTLERVLIGLAVSASFYALNSIARTLEKQIKK 1910882..1910977 hypothetical protein; RTO_18260 N/A MQDFCLADIKDIIILTSVGQKVKKNGGSAPF 1911012..1911773 PHAGE_Clostr_PhiS63: gp31; RTO_18270; phage(gi388570658) 7e-10 MATKRVTHTFRKGDILEVKEYHDGRYGARGLPREKKRKPTPEQMAVVNAMNKAETARHRLLEYFGKGDYFLTLTYRVEARPPDMAKAKKDFTNLISKLRTRYKKEQIELRWIRNIEKGTKGAWHVHMVITGCRDTIRWVEECWPHGGIYAEQLEKSKYYEEDFSQLASYITKNEKVGEKREDGKRDKPRLSESSYSTSRNMPLKPPKKKKLERWPKEIKQKNGYYIAKSYEGINPATGFKYRRYTLIRLNRRI 1911777..1912217 PHAGE_Salmon_SSU5: putative ribonuclease H; RTO_18280; phage(gi410491500) 3e-11 MKTVKIYIETTIAGPAAPKRGGYAAALTFTRRNGDIEDRFIKGEEEGTTYNRSVLLAMIYALQKLKEPCRVVFYTRNTYIKNMIQADNPEKWRRAEWKKSDGKGIQNQDLWKMFLEESKEHEIEIVYEKDSEYKETLQAYLQGKEV 1912220..1912708 hypothetical protein; RTO_18290 N/A MFDKFGEFDSCEEINRAAKAQLEEGDLEAIRTIAEENGLDLEDAEDYCTGAIEELTTPILAAIGKLELEAKDLKLEGALKDWTDCIKQSCMENEEMALAVRRKGKSLKDCMAIILKKAFGEKTQLDDRITKAAGLRSPLYISIPGKAQIKEIVREYYLGEKK 1912705..1913289 hypothetical protein; RTO_18300 N/A MIVYKGFNEKLQATCGKGIFKYEEGKTYTEEKSKTRSTGFHAAEYILDCLNWYTLDGKNRFFRCEAGGSIDEEEGCSMVVSTELTLEKELNLTEIAFAAMRYIVEHPKRDWRVITRGVCVQEDDAEAIGTDKIAIARGKNPVVAGNRGTVIGLILENADGEIIAASIRKVDDVQTKDSQYYTLTPDRRWVEVHV 1913286..1915424 PHAGE_Strept_3: hypothetical protein SpyM3_1130; RTO_18310; phage(gi28876300) 5e-11 MRRKAIECFAPKKTREKGLVATLQELDKILILNVYQAKELLVRYCINYETGEHEYWKQQHGWRKGGILNALNEDWRNWEWRFYNNYPKLQKEDTDRIKELIKQCVWHDSPWERINRLEHSYNSEIRERCETNRKMKLMNLMRKVPGRPKNLREWFFEQAAGEDYMFRNRETKEFVCTNCGESSWPEEIKRQDGEKKIRHNDMVFCPSCGKLVRAKTRTDHIEQKWKSCYLIQPVDEDTSVLRIIEAKVGWDNGRHYVEFGDEIRILLYKVYSNRKLKKTYMIYYEDSWDGWTKGNRKNLRAREGYLYPGEFGQILDGTTYSEATRVLEHLSKTGMELNYNRLVAGTGQMKGYAQKIEYLAKGRFWNLLRDTIGCTDYPGYPTQYYGPLDMREESIEGMFRIQDRQKINRIRDEHGGNRMVRWMQHSDETGQKISKETVQWMIKNEIEPSGIRELEKYMSPQKIMNYIERQKKEQYAGMTAEAVLEEYKDYLSMCEACCKNMADEMVYRPRELKRRHDEVVIDQQQIQILKELENNAEGKEAYAQEMRQKFPEAEEILKEIKSRYEYEDEEYKIIVPNTLVDIVKEGRALHHCAGSSERYFDRIESRETYICFLRRQEALRIPFYTIEVEPGGTIRQHRSYYDEEPGIEEIRVFLKEWQKVIRKRLTEEDRKLAKISKVKREANIAELKEKNNTRVLQGLAEDFLEAEELEAV 1915424..1916728 hypothetical protein; RTO_18320 N/A MELAQYQNYEEYKKAMNTVLNRTVEDFVMTGYLLKQGRDTDILKDSGYSNVNEFAWAEYKLEATQVSRYIRINDRFSEGGYSPRLQDHYKGFGYAKLALMLTLPESVAEELTPAYSKSEIQAVKEEIESEEKITDIEVILEGEKKEQRDLNNLEKAINQICMEDPELYVKLHGTVRTSVGTEPIKDVLAPDGDKLYSVRPQGCGRIMLYLNDEKDEVILQVVRQSLKERYAWSDILGYLVLITEQEDAKKNWEDLFGQQYPEKEQIAPVQPKKEKRKESKVVKAKPPKAQKQEKEKPVELPSDIPGQTEIEKDFPEMLPEPVKTSEIQREEPNCTGATVEIAESVENSVNNSKTVEENAINTETGTESEEVDNSKQNPAGSRWEYMKTMESYKMALYMAASVNEMPHMMLNSAEYWKKWLEAEVDENGDEFSKK 1916741..1917100 PHAGE_Lactob_c5: hypothetical protein; RTO_18330; phage(gi418488180) 1e-07 MSIDYSDMAFPKLACKKKRKSHKKSILKSRKGVCYLCSILYDDYSKQYTEEHHIMFGSGQRELSEADGLKVDLCRNHHKEGPEAVHNNKEMRELLCRIAQTEYEQTHTREEWKARYKKN 1917878..1918258 hypothetical protein; RTO_18360 N/A MTRQEKEDQAQLEWLQKWKERRKEKRDVRKKSLFYKILRKLGIIKDYEEDIRTRMEMCKRAIKANVCPEDCDICAWDVKGGIDYNGYITTGRNNRKPSEVSKKNQRTNKKRGSSQARHERGKTARS 1918230..1918361 Helix-turn-helix.; RTO_18370 N/A MKEERLQDLETGRKELTLGEAIKYADTYNVSIDYIAGRKKVEY 1918963..1919274 Protein of unknown function (DUF1492).; RTO_18400 N/A MKMYPSSNNDGMPHGSNQSDLSSYAAALQEREDKLYQEGVKQVQTYKDIEYRINELDDQDERDVMFYRYIKGFEWWQIAQLMEYSESWIYELHGRALKKIQIN 1919310..1919738 PHAGE_Lister_B025: gp65; RTO_18410; phage(gi157325282) 5e-18 MVLSKDGQILLQYSLEKTPECQRVSFVREGKKMTDREAKAFYNAAAWKHKRMQILERDHYECQDCRKRLKDAVAAGRILQGEDRKIRRAEEVHHIVELKEHPELGLEDDNLISLCVKCHNLRHGRTPRRFQRKKKLASKERW 1920289..1921962 PHAGE_Staphy_2638A: ORF005; RTO_18430; phage(gi66395455) 1e-97 MVTCKEIDDYLKYAEEHPKWINKKRKLLIENIVKPTLKRNDVFFDEKTYRNCLQYCKTNYYELFPFQKFIYAFAFMYVDDIPVFSKFFIKEGRGNGKDGFIVPLVNFFQTPLYGVKNYHVEIVANSESQVKDTFKVAYDMLHDNPKFKGKFSVTKELITNLATGSEMKYNTSNAKTKDGKRTGCLVLNEIHAYENYDQINVFESSFGKVKHSREFIITTDGYVRDGPLDEISAMCAEILETGENLLGYFPFICEIDDMKEVDDPEAWHKANPSMEYMPILANQIMHDYLEMKKIPSKRAEFITKRMDRSARKEEETVTTWQNVLRACYEGETMEELERKIPRITLDTRGQAAVIGIDYADVRDFASAGILTKTDDGEWIWRQHTWICADSPFIDSIKFPLRNAGQAEFEDFEVVPGPVIDVNLIVDWCMEQMRSYEVKKIAMDTYRYTLFKQAFEERGLTIEDKKNPHGIVRLIRKITSATGIIAPFIQSMFSQGMINFGPSAIMRWYTNNTSVSEDKFGNKNFGKIEPKLRKNDGFMAFDVAMFCKDELEVQIIYV 1921977..1923134 PHAGE_Clostr_phiCD6356: putative phage portal protein; RTO_18440; phage(gi326536850) 2e-22 MFDFLFQDRNKEIQSLAEIIAVDMEKLNLSKLAIEKAIMMIAKAIAKSDILIQTESKEKHKKEYRLNVQPNDNECGTVFWTEVVKQLLTEQEALIIPLSGKYYRATSWSHTNEVMMKRVYKNVMLSCGGENLTIFSTFQSDEVIHLRYDNARIRLYLQNVVGQFDKTMDSINAMMQLSSQPRFKLKLGTNALSFREKQADGTDKVMTKDQYVLKIKKLLTSDALEVLTEQENASVEQLQINTAVKAEELAKMALQINNEVANAFDIPEAVFNGNITEKSDATNEFITYAVSPVAEVINDTLTAYVVGEDDYCSKNEKVMVWLARFKHVDVVDSAVNLDKLRGIGFHLDEIRGMVGYPLLNTEFSTERALTKNYGGEGSNNAAQET 1923204..1923962 PHAGE_Lactob_JCL1032: putative ClpP protease; RTO_18450; phage(gi418489116) 6e-22 MEQKKVVYRFQQTDNVHEIFIFDEIRKIGPFNWDTWQYDDSETSAKHFKELLDAIPETDEIKIYFNSNGGSVDQGTAIYNMLQQHGSYKTGIVMGGCHSIAFTILQACDKRIMGQGTTAIIHDMWETVTGNAADLRAEADNLDVAMDSCVALFMQRATVSEEELREMMHKTTTLSPQKALEYGLIDEIGVAQKVEDPDMKLQEVIKENKALQMELKSRNEHQKQLAEFYQLTHKKKEKTEEKDSTGWGAFFG 1923976..1925124 PHAGE_Clostr_phiCD6356: putative major capsid protein A; RTO_18460; phage(gi326536852) 5e-33 MRIEDLSQEVKDKVKQLLDNAPADQKAEAIMQSIEMIDEAMHADLIKQVVAEAERASRDADYKRQLGLRNLSQKEKKFYENFKDIKQAFTANQIDIIPTEIIDRTLDDVKKASPILKLVNMAPANVKKWIVASHSGAAVWGPLTDAIKGELSAEVTALNIDLHKLTAYLVIPKSIRELSMEFVDRYFMAILSEAMQDGLVKGYLDGDGKTGPIGIFRQIGTVESAGTNKAKTVLTTVTKFSPKGLAPVRKTLTNDGKRVVDKLYLICNPSDEAEYVDPCMYGEALTGGYVNKSFIDIEKIVDANCPKGKAAFTIAGYYTMGTAGVRVDEYDQTKAIEDADLIVAKCHANGRAVDDNVAVVFDVTKLEEYVLPVNQVTVPKQA 1925145..1925435 hypothetical protein; RTO_18470 N/A MNEKELASLVEEMREEFQIPPYYEDKQLANLAKEGEHAVGRLNPGCSITEDLTYRMLLKNYMYYAYHHRVSEFMENYSSMILTWQMETEVDADGNA 1925416..1925787 phage head-tail adaptor, putative, SPP1 family; RTO_18480 N/A MQMAMPEYTDGVLELYEITNDESEDYPEERLKYTGLRIWYRELAVYDTTRAKLSADSVEVTYKLAIPQYKKINSKCICLIDGEQHEIYNIAHTTTKDGFKESELTLKTPAYEREVIDDTERTE 1925765..1926097 hypothetical protein; RTO_18490 N/A MTQKELSEILHDIGCPVNEGVSSLKNEKVFPRIDYWEIMWEDTMASGDDYENEITWQISFYARKPRNPKLIALKNRLNELGYHPTIAHEYVTEDRVWHSYFSITTDGVIG 1926094..1926468 phage protein, HK97 gp10 family; RTO_18500 N/A MNSSEITFYDGGLEDFEELLKQYSENVSPDKALDAVEEGAKEFVNDLLRLPKPRSQITKAGYTHIVSTFALERTDSGIKVGWGKYYGPMLEHGTRKMAARAHLKPLFERNKEKYYKKMTESIFG 1926480..1927097 PHAGE_Bacill_BtCS33: major tail protein, phi13 family; RTO_18510; phage(gi392972719) 1e-07 MPINTKKPAMKQTVGAQYMCFADATEGKEYDGTYEADVEKTEVVKSVKVTENSETSDVYASGKIYDSDSPMSSIDIEVSVIAFPDDTISKMRGETKGTGGLILAGGKSERPFFAYGKVVKLKNGKSRYEWFPKCKLVENSDDIATSEEKASEQTDTIKIRAYPFDVAGNIVSKVTESTAPAGLTEEKFFAKPILTDADLTTAVGA 1927102..1927506 hypothetical protein; RTO_18520 N/A MKSKLIKLTDGSKLEVKVNFYTLYLVKMNGIDKKLDGRTEEDLTEEENVELAGKLIYVILRSNGLKVDEEEAMMLTPMDADSIREIFEEFEKRLNEYKKKNRRRSLLLRGRRSQRSNRHRLGRIHGVCKKDGNE 1927499..1927603 hypothetical protein; RTO_18530 N/A MSEDEFWNSDPVFFNECLEVFTELEKRKGGALIG 1929746..1930444 PHAGE_Clostr_PhiS63: gp14; RTO_18550; phage(gi388570643) 3e-17 MMDVEYNGVLGSSFGIYAKTLPAIPSAVKKESSVEIPGTDGTMFLLEGGYETSEIKVDFNFIGDADQWDERFALAKKWLSARGKFLRLGSDPRYCYKILKVTVDDAEHTSERIGNFKATFLTKDGLRYLCEGLHEQRVEDIGYHAGEESHPVYKILGEGVCTLTVNGKTMTANVGQNLTIDTDRQLAYRSDGTLNNTAVTGNYEDLVLVEGDNKVTITDGFDLKVIPYWRYL 1939460..1939491 attR N/A CCCTAGACAGCTTTGAACTTTTCCCCGGAATC