Definition Gardnerella vaginalis HMP9231, complete genome.
Accession CP002725
Length 1,726,519
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 19 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 596648..596662  attL    TGCTTTTAGAGTGAT  N/A  Click
2 597054..598646  PHAGE_Geobac_E2: putative terminase large subunit; HMPREF9231_0496; phage(gi148747729)  1e-72  Click
3 598658..599947  PHAGE_Burkho_phiE125: putative portal protein; HMPREF9231_0497; phage(gi17975165)  2e-71  Click
4 599904..600638  PHAGE_Geobac_E2: putative Clp peptidase; HMPREF9231_0498; phage(gi148747731)  8e-46  Click
5 600641..601825  PHAGE_Salmon_ST64B: Major capsid protein precursor; HMPREF9231_0499; phage(gi23505451)  3e-33  Click
6 601851..602129  PHAGE_Geobac_E2: putative DNA packaging protein; HMPREF9231_0500; phage(gi148747734)  2e-05  Click
7 602459..602839  PHAGE_Geobac_E2: hypothetical protein GBVE2_gp010; HMPREF9231_0501; phage(gi148747737)  2e-13  Click
8 602832..603170  PHAGE_Geobac_E2: hypothetical protein GBVE2_gp011; HMPREF9231_0502; phage(gi148747738)  1e-11  Click
9 603154..603726  PHAGE_Geobac_E2: putative major capsid protein; HMPREF9231_0503; phage(gi148747739)  2e-28  Click
10 603744..604109  PHAGE_Bacill_1: hypothetical protein BV1_gp29; HMPREF9231_0504; phage(gi155042944)  1e-14  Click
11 604106..604270  conserved hypothetical protein; HMPREF9231_0505  N/A  Click
12 604360..606927  PHAGE_Geobac_E2: putative tail tape measure protein; HMPREF9231_0506; phage(gi148747742)  1e-65  Click
13 606930..607592  conserved domain protein; HMPREF9231_0507  N/A  Click
14 607605..610412  PHAGE_Clostr_phi8074_B1: putative phage tail protein; HMPREF9231_0508; phage(gi431810378)  5e-20  Click
15 610542..610706  conserved domain protein; HMPREF9231_0509  N/A  Click
16 610706..611056  conserved domain protein; HMPREF9231_0510  N/A  Click
17 611227..611646  PHAGE_Bacill_WBeta: phage holin; HMPREF9231_0511; phage(gi85701395)  4e-25  Click
18 611639..612559  PHAGE_Clostr_phiSM101: autolytic lysozyme; HMPREF9231_0512; phage(gi110804057)  1e-20  Click
19 613105..613317  conserved hypothetical protein; HMPREF9231_0513  N/A  Click
20 613333..613347  attR    TGCTTTTAGAGTGAT  N/A  Click
21 613378..614973  PHAGE_Bacill_Gamma: site-specific recombinase; HMPREF9231_0514; phage(gi77020163)  1e-37  Click