gi|333392846|ref|CP002725.1|  Gardnerella vaginalis HMP9231, complete genome. [asmbl_id: NC_000000].1726519, gc%: 41.23%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
596648..596662                     attL                                                                                 N/A                 TGCTTTTAGAGTGAT
597054..598646                     PHAGE_Geobac_E2: putative terminase large subunit; HMPREF9231_0496; phage(gi148747729)     1e-72               MEKYEVTKFKKEDSTYSKDLADYAVSFIECLTHTKGTWAGKPFKLLDWQEQIIRDLFGVVKPNGYRQFNTAYIEIPKKMGKSELAAAVALLLCCGDNEERAEVYGCAADRQQATIVFDVAADMVRMCPALNRRVKILASQKRIIFLPTNSFYQVLSAEAYSKHGFNIHGVVFDELHTQPNRKLFDVMTKGSGDARMQPLYFLITTAGTDTHSICYETHQKAVDILEGRKIDPTFYPVIYGAKDSDDWTDPKVWKKANPSLGVTVQMEKVKAAFESARQNPGEENAFRQLRLNQWVKQSIRWMPMEKWDACGFQVNEEELEGRVCYGGLDLSSTTDLTAFSLVFPPLDESDKFRILPYFWVPEETLSLRVKRDHVPYDVWEKQGFIKTTEGNVVHYGFIEKFIETLGERFNIREIAFDRWGAVQMVQNLENMGFTVVPFGQGFKDMSPPTKELMKLTLEQKIAHSAHPVLRWNMDNIFIRTDPAGNIKADKEKSTEKIDGAIATIMALDRAIRCGNANTQSVYDARGILFM
598658..599947                     PHAGE_Burkho_phiE125: putative portal protein; HMPREF9231_0497; phage(gi17975165)     2e-71               MSIFSKIFKSRDKPENRFNLNAQRFISGMSSSGKRVNERSAMQMTAVYSCVRILSEAVASLPLHVYEHTSTGTAKAVKHPLYKVLHDEPNLEMTSFVFRETLMTHLLLWGNAYAQIIRNGKGEVLGLYPLMPDRMRVDRDESGQIFYEYTLNDSDVLAGKETSVKLKPFDVLHIPGLGFDGLVGYSPIAMAKNAIGMAIATEEYGASFFANGATPSGILEYPGTVKDPQSMRDSWNKGFSGSNSHKIAILEEGMKYTPISISPNEAQFLETRKFQINEIARIFRVPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVARFEQSITRRLFTDKEKETYYVKFNVDGLLRGDYQSRMNGYATARQNGWMSANDIRQLENLDKIPACEGGDLYLINGNMLPLNRAGAFANSSGKEEKGDEEVLAVEKPGGQQ
599904..600638                     PHAGE_Geobac_E2: putative Clp peptidase; HMPREF9231_0498; phage(gi148747731)         8e-46               MRKFWQWKNQAVNSENNEILERTLFLNGTIAEESWFDDDITPQLFKDELNAGSGNITVWINSPGGDCVAAAQIYNMLMDYKGCVTVKIDGIAASAASVIAMAGTKVYMSPVSMLMIHNPMTVAFGNRNEMEKAISMLDEVKESIINAYEIKTGLNRVKLSHLMDSETWMDANKAVELGFADGVLTRGETTDIGIPQVSTLYSKASVQNTLLEKISKACRISGKETNNISADDLMDRLFLIKNWR
600641..601825                     PHAGE_Salmon_ST64B: Major capsid protein precursor; HMPREF9231_0499; phage(gi23505451)     3e-33               MMNTISNMVEKRNKAWQGAKAFLESKRDKDGLISEEDAKTYDEMEAKVKAYSTEIDRLEQMEVMDKELSKPTSEAIVAKPMKTGVKFEKQGRARDEYKQAMLTALRSNFKRVDNVLQEGVDADGGYLVPEEYDNRLIETLKEENIIRSLATTITTSGEHKINIAMSDPAAAWIEEGANLNFGDSKFAQILLDAHKLHVAVKVTEELLHDNAFNLENHLLTSFGMALANAEEDAFLNGDGVGKPTGIFNKKDGGTFLKETTSIKTDDLIDLIHALKRPYRKNASFIMNDKTVASIRKLKDNNGAYVWQPSYQDDEPNRILGYPVYTSAYAPENMVAFGDYSYYNIGDRGSRSFKELTELFAGNGMIGFVAKERVDGKLVLKEAVQILPVKTSVAA
601851..602129                     PHAGE_Geobac_E2: putative DNA packaging protein; HMPREF9231_0500; phage(gi148747734)     2e-05               MIVTIEEAKNYLRVDSREDDELINTLIHSAEKLCQGVARKNDTSLISENFDEYRLAVLYATGYLYEHREEADHHALMLTLRSMLFTVRKTGF
602459..602839                     PHAGE_Geobac_E2: hypothetical protein GBVE2_gp010; HMPREF9231_0501; phage(gi148747737)     2e-13               MSKVSIGSLSKEVIRELKTYAKVTTGKVKEAVKNAGKTAKEEINMTAPKRTGAYAKSWAVKTLNETGSRLVLVVHSRNKYQLTHLLEYGHAKRGGGRVEARAHIAEAESKAVRSFEKEIEEAVKNG
602832..603170                     PHAGE_Geobac_E2: hypothetical protein GBVE2_gp011; HMPREF9231_0502; phage(gi148747738)     1e-11               MGNLLNIMREIGFPFAYHHFAEGESPNPPFLLFLTPASSNFAADGKTYFKANEIHIELYADYKNPVLEEQVEAVLDRHGIFYNKTEAFIESEKLYETLYIFEMEVTINGKQG
603154..603726                     PHAGE_Geobac_E2: putative major capsid protein; HMPREF9231_0503; phage(gi148747739)     2e-28               MGNKVKYNLKNVYAAKLKKDSSGFSYDEPKPIPGAVSISLEAEGESSPFYADGIVYFRSTANNGYSGDLEIALIPEWFRTEILREELDKNGVLVENAKISETEKFALLFEFDGDVNAIRHVLYNCSATRPSIESETKEDTIEPGTETLSLTADPREDGLVKSRSGDTTSKETYEKWYKSVYVPQVNTEIK
603744..604109                     PHAGE_Bacill_1: hypothetical protein BV1_gp29; HMPREF9231_0504; phage(gi155042944)     1e-14               MLEKTVKVNGKDVKFRSSATIPRLYRIKFKRDIFKDLSKLEQSFKINEGVFEIADLEIFENVAYIMAYHADNSIPASIDEWLDEFEMFSIYEILPEILELWGANLETEVKSKKNLKQQHGK
604106..604270                     conserved hypothetical protein; HMPREF9231_0505                                      N/A                 MTTALFLLRCTEIGISICELDLLTIGMILDMWTEKANDNVKYDKLASQTEFDRF
604360..606927                     PHAGE_Geobac_E2: putative tail tape measure protein; HMPREF9231_0506; phage(gi148747742)     1e-65               MANRIKGITVEIGGDTTGLDKSLQQVNSTIHSTEQSLRDVNRLLKLDPTSTQLLSQKQAFLQKEIQETSNKLNVLKQADKQAKVQLENGELGRDKYDALQREIVETENNLDSLKEKLKQVGSVSLTKLSSQFDSTSKKIKKLGDGMSSLGQSLSTKVTLPIAAIGTAGFTAAADLQDAMGATEQIYGKSANKMLKWSGSLKSYYGIAQGQALEYANTMGAMLKNIGGKSDAEAAEMSQKLVALAGDLSAMFGGTTESAVLALTGALKGNNAMLDNYGMGVNEATIKAKALAMGLHDSRGAMSLQAKQAATLALIMEQTADAQGQAGREAAGASGSMKILKTELQNIAATIGNVLLPVITPLMQKISAWLSKFKQLSPESQKLIVTLGLIAAAVGPFLVVLGTCISKIGVAIQGFSKLALFIGKMFASFTSGSSILEGLGAVLGGVSAPILAVVAVIGVLVAAFVTLWNTNEEFRNSVIAVWEKIKETFTGFVNGVKEKLSSLGIDFTSIVEGLKTVWNGLCAILAPLFEGALNLSFTSFKTVLDLITGVLDVFIGLFTGNWSQLWNGVKEIFTAVWNAVKNTFITVFNTLKNVFNVFLSFFGTSWNKLWSSVKNFFMNVWNGIVSFFTNVLNGIKNTATSVWNGIKTAIMSVVNGIKTSISTVFNSVANMVKSVFNGIKNTVVSVWNGIKNAIITPIEAAKNKVKAVIDAITGFFSGIKLSLPHIKLPHFSIKGQFSLTPPSVPYLAIDWYKKAMNKPMLLNGATIFGEKNGRMLGGGEKGPEVIMGLDTLQNMSAGANTQMLSVMNQILAIMDAYFPQFSNQSIVLDTGELVGGIAHRMDSELFKLQTRKTRGW
606930..607592                     conserved domain protein; HMPREF9231_0507                                            N/A                 MYGMLINGLHSFNDLGLVATSRPRIQLPEPKLEYLQIPGRQESIDISESLAGEVLYEMREGCFEFIVANKNKWSETCHSVKTLIHGKSVKLSLDDEPLFYYQGRMWVSDFKSDKNYSTLTLNYKLQPYKYSVDDSDGVHTIWGMQVDDKREITLVHDFDMTLIPEFNNLSSNSMLLDSNGKKYEIKTGVNRFPQLRSKTNMSLTFVGNGMVNISYKRGWL
607605..610412                     PHAGE_Clostr_phi8074_B1: putative phage tail protein; HMPREF9231_0508; phage(gi431810378)     5e-20               MLDDNTIYYPNDDKAVLDDITLNLELNTAGTLTFTCPSQNPCYELIKNRKSIVSVWRDDEEIFFGEVREQVKDLYGSKKVTCVGLLTYLADSIQPQKEYHDQSSYQFLEKLLQAHNSQVDDYKKIRIGFVTVSDSNDSLYRFTNFETTLEAIMGKMVEKLGGYLRLRKEDGKLYLDYLRLEEMGKATSQHISFGLNLLEYAENLSAEDVTTAVIPLGKELENENGENEVLKKHVDITSINNGKNYIVSREAQKTFGWVCKVVNFNNVTVPTNLMRKAVKWLQDNQFERVEISLSAVDLSELGLYYATIECGDRVRCLAPQFGMDRVFPVVKQTIPIQKPGEVRIVLASRISKGYVQNVSHAVQTLKEEAVEARKIDNERVKAAIDNIKAQMGNSQSGYKISEYDSKGMWVRDLYMDTPDKNTATKVLQVNMNGIAGSHNGFSGPYSTAMTLDGMVYGDRIIGHSIDAEKLSVSYTSQVEKQISKAKNEAIKDTGRRLENYYTISEINTKLNVTDGKIEAGVESVNHSLKQKNGNYYGSYTPSQFNAPMSLWLADSEKMQHVGDFFYDTSTGYAYRLIVKQESLAVKFNEKSHTESAFDDFVDIFYKYEDKIYAIPGLTGEKISGATVFVPSNEFWLHFRTNWSPFDNYGFKIDSIKKEYSGEISGYVSKLPEDINIIEVEGENYPESEHPYKGGTSKLWHYVSADSISSFRTFAWIRVKDKDIEAAKSTADKAISKLTIVEDSISSMVKKGDFGSFMQQNYNSFLLGFNHSSKYVQITPGQIELYDGEVDEDHKRAVFDKNGNNFYRNGVYIGYVGTGEWEEDNSHKGLVFHLTNDGKYMAFAQRKSADEETYATMLCFSRSQSIYKEYGIHAGCNFYMHGNKIIDPVWQDGAGVDADINYVQIIEMNQDGKASKWGSNAHMVFKNGILMKVKYY
610542..610706                     conserved domain protein; HMPREF9231_0509                                            N/A                 MEKLIIPTNKIVVNKGTRSKDVTESITTPVVDNTKILCEISHKLDIILKKIGGE
610706..611056                     conserved domain protein; HMPREF9231_0510                                            N/A                 MVKPTISYAVAVQKYKAELNEKIVELNKQIPIPTYMIEGIVASVLSDMRSAVIAENSMEYEVYVKQLEDYFNSRERELNDEILKIKAEKTEKTEKDEAAGKGVKGGMVDEGEKDGK
611227..611646                     PHAGE_Bacill_WBeta: phage holin; HMPREF9231_0511; phage(gi85701395)                  4e-25               MRGFWNSAQLAFTLVGGWLGYFLGGCDGLILALVLFVVADYITGVMCAVTDKKLSSSIGFKGIFRKVLIFMLVGIANIIDFHVLKQGSVIRTAVIFFYLSNEGLSLTENAAHLGLPVPEKLKNVLEQLHDKNRKDNTHE
611639..612559                     PHAGE_Clostr_phiSM101: autolytic lysozyme; HMPREF9231_0512; phage(gi110804057)       1e-20               MSKKGIDVSEWQGDIDFNAVKASGVEFVIIRAGYGIGCKDKWFEQNYRKAKTAGLDVGAYWYSYANSGFEAAEEAQSLMNMLSGKSFEYPVYFDLEEKSQLNRGRAFCDSLITSFCNKLEACGYYAGFYTSLSTANNLVSAHVRNRYALWIAQWNTHCNYQGSYGLWQYSSNGSVPGVAGRVDMDYAYVDYPSIIKNAGLNGCKNGGSDQAARTSSIDEVAREVINGAWGNGSTRKQRLTSAGYDYASVQNKVNELLGVKACRKSVDELAREVIRGAWGNGSTRKQRLAQAGYDYDTVQKRVNELL
613105..613317                     conserved hypothetical protein; HMPREF9231_0513                                      N/A                 MQISNDAHGLKDVKARAWTKESMQADFRFEIAEKLTVSLFKKGLISEQEKEKISRLNREKFHPFYKELLG
613333..613347                     attR                                                                                 N/A                 TGCTTTTAGAGTGAT
613378..614973                     PHAGE_Bacill_Gamma: site-specific recombinase; HMPREF9231_0514; phage(gi77020163)     1e-37               MKEIIKIDSTMRKTGFEKKTRVAAYARVSSDSDEQLLSLEVQKEHYENYIKSNPCWEYAGLYFDEGISGTKIDKRESLKQLLKDCQSGQIDRIITKSISRLARNTVDCLEIVRKLTGLGIYLYFEKENIDTEHMSSELMLSILSSIAQSESRSISENNTWAIQKRFENGTFVISCPAYGYKNENKKMIIVPEQARVVKEIFNMALSGMGGEAIARVLTDKKIPTKKGGSWTSSTVNAILNNKTYTGDVIFQKTFTDDNFNRHKNCGEKQQYVIENHHEAIISHETFNLVKEIIAWRRSENNIVCGSGKYNKLYAFSAKIRCGECGSKCKRRIIYQHNKAYGIWVCITHLEDIHACSQKSVMESYLKISFLQMLNKLKAGYVQMLTPLVESLRGVNNKDGLNKVIELEEKIAKLQEQEQVLSKLLAGGYIEMDSYYLESNQLKTEIDTCLKEKLQLSNSLNGNLTHLNEAQKLQRFVSVTEVFSEFKDEDFLDFVDGIVVKSRTRFLFILKCGLELEEEVKETWHASHMVTE