Definition Riemerella anatipestifer RA-GD, complete genome.
Accession CP002562
Length 2,166,384
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 82 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 157187..157203  attL    TTGCGGAGAGAGAGGGA  N/A  Click
2 complement(157280..157549)  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0161; phage(gi418489921)  2e-46  Click
3 complement(157546..157998)  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0162; phage(gi418489920)  3e-85  Click
4 complement(158013..158771)  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0163; phage(gi418489919)  5e-144  Click
5 complement(159041..159607)  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0164; phage(gi418489918)  8e-92  Click
6 159727..159906  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0165; phage(gi418489854)  2e-27  Click
7 159903..160112  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0166; phage(gi418489855)  9e-35  Click
8 160168..160482  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0167; phage(gi418489856)  5e-57  Click
9 160460..160582  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0168; phage(gi418489857)  6e-18  Click
10 160579..160764  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0169; phage(gi418489858)  2e-12  Click
11 160879..161451  PHAGE_Clostr_phiMMP02: putative essential recombination function protein; RIA_0170; phage(gi414090421)  5e-39  Click
12 161451..162209  PHAGE_Persic_P12024L: hypothetical protein; RIA_0171; phage(gi399528499)  7e-08  Click
13 162234..162530  hypothetical protein; RIA_0172  N/A  Click
14 162534..162713  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0173; phage(gi418489867)  2e-23  Click
15 162999..163610  PHAGE_Lactob_1: DnaA; RIA_0174; phage(gi219563230)  4e-06  Click
16 163623..164678  hypothetical protein; RIA_0175  N/A  Click
17 164653..164943  hypothetical protein; RIA_0176  N/A  Click
18 164897..165220  hypothetical protein; RIA_0177  N/A  Click
19 165169..165333  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0178; phage(gi418489870)  1e-14  Click
20 165330..165617  PHAGE_Riemer_RAP44: S-adenosyl-L-methionine-dependent methyltransferase; RIA_0179; phage(gi418489872)  1e-49  Click
21 165643..166455  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0180; phage(gi418489874)  6e-153  Click
22 166512..166697  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0181; phage(gi418489875)  3e-29  Click
23 166676..166993  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0182; phage(gi418489877)  7e-59  Click
24 167100..167396  PHAGE_Riemer_RAP44: DNA-binding protein; RIA_0183; phage(gi418489878)  1e-50  Click
25 167393..167638  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0184; phage(gi418489880)  1e-45  Click
26 167662..168411  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0185; phage(gi418489881)  2e-146  Click
27 168595..168750  hypothetical protein; RIA_0186  N/A  Click
28 168750..168959  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0187; phage(gi418489882)  3e-30  Click
29 168960..169325  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0188; phage(gi418489883)  2e-66  Click
30 169332..169583  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0189; phage(gi418489884)  2e-41  Click
31 169580..169852  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0190; phage(gi418489885)  4e-48  Click
32 169942..170271  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0191; phage(gi418489886)  2e-57  Click
33 170511..171461  PHAGE_Riemer_RAP44: DNA-damage-inducible protein D; RIA_0192; phage(gi418489887)  2e-157  Click
34 171605..171925  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0193; phage(gi418489888)  1e-56  Click
35 171928..172677  PHAGE_Riemer_RAP44: phage antirepressor protein; RIA_0194; phage(gi418489889)  3e-135  Click
36 172740..173054  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0195; phage(gi418489890)  4e-58  Click
37 173157..173576  PHAGE_Riemer_RAP44: bacteriophage lambda NinG protein; RIA_0196; phage(gi418489893)  3e-78  Click
38 173582..174040  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0197; phage(gi418489896)  1e-85  Click
39 174072..174206  hypothetical protein; RIA_0198  N/A  Click
40 174213..174917  PHAGE_Riemer_RAP44: adenine nucleotide alpha hydrolase-like protein; RIA_0199; phage(gi418489897)  8e-135  Click
41 174892..175617  PHAGE_Riemer_RAP44: ParB-like nuclease; RIA_0200; phage(gi418489898)  1e-134  Click
42 175607..176089  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0201; phage(gi418489899)  2e-91  Click
43 176184..177482  PHAGE_Riemer_RAP44: phage terminase large subunit; RIA_0202; phage(gi418489900)  0.0  Click
44 177596..178954  PHAGE_Riemer_RAP44: phage portal protein; RIA_0203; phage(gi418489901)  0.0  Click
45 178954..180009  PHAGE_Riemer_RAP44: phage head morphogenesis protein; RIA_0204; phage(gi418489902)  0.0  Click
46 180014..180235  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0205; phage(gi418489903)  9e-37  Click
47 180265..180588  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0206; phage(gi418489904)  8e-57  Click
48 complement(180743..180946)  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0207; phage(gi418489895)  7e-34  Click
49 complement(180928..181077)  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0208; phage(gi418489894)  6e-22  Click
50 complement(181362..181562)  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0209; phage(gi418489892)  2e-13  Click
51 complement(181606..181872)  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0210; phage(gi418489891)  1e-45  Click
52 182005..182661  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0211; phage(gi418489905)  1e-112  Click
53 182665..183030  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0212; phage(gi418489906)  1e-56  Click
54 183051..184133  PHAGE_Riemer_RAP44: putative head protein; RIA_0213; phage(gi418489907)  0.0  Click
55 184133..184456  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0214; phage(gi418489908)  2e-57  Click
56 184450..184773  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0215; phage(gi418489909)  8e-60  Click
57 184764..185207  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0216; phage(gi418489910)  1e-75  Click
58 185204..185614  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0217; phage(gi418489911)  1e-76  Click
59 185642..186148  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0218; phage(gi418489912)  1e-92  Click
60 186228..186689  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0219; phage(gi418489913)  4e-81  Click
61 186707..186892  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0220; phage(gi418489914)  1e-32  Click
62 complement(187063..187788)  PHAGE_Riemer_RAP44: phage antirepressor protein; RIA_0221; phage(gi418489879)  6e-136  Click
63 complement(187792..188121)  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0222; phage(gi418489876)  9e-56  Click
64 complement(188460..189152)  PHAGE_Riemer_RAP44: Ig domain-containing protein; RIA_0223; phage(gi418489873)  7e-129  Click
65 189339..193520  PHAGE_Riemer_RAP44: putative tape measure domain protein; RIA_0224; phage(gi418489915)  0.0  Click
66 complement(193523..193885)  PHAGE_Riemer_RAP44: DNA-binding protein; RIA_0225; phage(gi418489861)  4e-62  Click
67 complement(193882..194175)  PHAGE_Riemer_RAP44: DUF2136 superfamily protein; RIA_0226; phage(gi418489860)  5e-53  Click
68 194232..194663  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0227; phage(gi418489916)  5e-80  Click
69 194660..195763  PHAGE_Riemer_RAP44: putative phage tail protein; RIA_0228; phage(gi418489917)  7e-125  Click
70 195751..199644  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0229; phage(gi418489922)  0.0  Click
71 199671..199994  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0230; phage(gi418489924)  1e-56  Click
72 199978..200310  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0231; phage(gi418489925)  2e-61  Click
73 200307..200828  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0232; phage(gi418489926)  1e-96  Click
74 200818..201396  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0233; phage(gi418489927)  7e-104  Click
75 201419..201973  PHAGE_Riemer_RAP44: N-acetylmuramoyl-L-alanine; RIA_0234; phage(gi418489928)  3e-105  Click
76 complement(202215..202562)  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0235; phage(gi418489850)  2e-62  Click
77 complement(202584..202862)  PHAGE_Riemer_RAP44: lambda repressor-like DNA-binding domain protein; RIA_0236; phage(gi418489929)  5e-45  Click
78 203228..203839  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0237; phage(gi418489851)  1e-111  Click
79 204161..204502  PHAGE_Riemer_RAP44: hypothetical protein; RIA_0238; phage(gi418489852)  1e-63  Click
80 204502..204684  PHAGE_Riemer_RAP44: DNA-binding protein; RIA_0239; phage(gi418489853)  2e-27  Click
81 complement(204723..205967)  PHAGE_Riemer_RAP44: DNA breaking-rejoining enzyme; RIA_0240; phage(gi418489923)  0.0  Click
82 complement(205999..206086)  tRNA  N/A  Click
83 205999..206015  attR    TTGCGGAGAGAGAGGGA  N/A  Click
84 complement(206213..206575)  Integral membrane protein possibly involved in chromosome condensation; RIA_0242  N/A  Click
85 complement(206732..207679)  PHAGE_Lactoc_949: putative ribonucleotide diphosphate reductase alpha subunit; RIA_0243; phage(gi327197952)  2e-24  Click