gi|325334929|ref|CP002562.1| Riemerella anatipestifer RA-GD, complete genome. [asmbl_id: NC_000000].2166384, gc%: 35.01% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### 157187..157203 attL N/A TTGCGGAGAGAGAGGGA complement(157280..157549) PHAGE_Riemer_RAP44: hypothetical protein; RIA_0161; phage(gi418489921) 2e-46 MKTAIDERILSLPRYLKKNGEIKRLQEFYDEIGISKQRFNKIKKQDISGINAHFTVEQIHKIGIVYGIDFNWIFGVTDTPRQNTKSAQI complement(157546..157998) PHAGE_Riemer_RAP44: hypothetical protein; RIA_0162; phage(gi418489920) 3e-85 MSPTEKGKIFEDYVQDIMFPVDRYIVVRKTPNFEDASKRLIEDCNNPDFTFRRIRTGKEYSVEAKFRIPRGYNVNVCTEEQLERYRKYDEQSPTFMALGIGGCPSSPTILLFFHISKLASTNIFLPDFFKDNYFRLNSPVFSKYMEKLLR complement(158013..158771) PHAGE_Riemer_RAP44: hypothetical protein; RIA_0163; phage(gi418489919) 5e-144 MKKIIQKSIKNNLKDRLNTVYNYLKKTTEFTTQTLLAEKIGYTRSNFSAALNGDERYLTEGVVDKIVEAFPQLNREWFITGKGEMLKSSEETPIKGEGVKVILDAEIKRTPSEGTPYYDVDFAGGWNSDEIFSLGNPSFYIQSPDFRRAEFATNLVGNSISKIIPSGAIVGFRQVEDWKTYFPTNELYGIITKNEMRTVKRVKRKKGDSNTLVLIPDPLEVHSGYEPEELPIDFVSKMFQVVAWAMFERVAM complement(159041..159607) PHAGE_Riemer_RAP44: hypothetical protein; RIA_0164; phage(gi418489918) 8e-92 MRSFRLSIISLVISLIAISLVYFRPSPIEIDMFNSIITILALLITLLIGYQIFQIIDFKQEKTNLLNEVDKKFKATQEEFDKSMLEMKGANTVMYSHFFQYYMEGQNDYGVLSTFSDIVINNSHNEDLCKVMLRAVLEYTETGITFKHEYEQKEIMKLFEAKSIDFLKAIDKEKFELLRERLDMSSIR 159727..159906 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0165; phage(gi418489854) 2e-27 MKKRISLPSKYHKILREEFGVTQQTITNALKYFTESELAKNIRKRAKECLKKEIDEIEI 159903..160112 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0166; phage(gi418489855) 9e-35 MTAEQLIPIFRTQLTLVCDPKETEKIHRWMLGVAESKESRKKRLHAMFDSKERYKIYPKPKRKRRKKAL 160168..160482 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0167; phage(gi418489856) 5e-57 MAKIQQNLETLKFNDFGFNYEGRNTTPTVWFAIDEDDTVLVTVDEFGEVNITDENLCLKDLQMSEEAQKGWVNIAKQKLYENQEEDLELEYHLADLKNDFNKNK 160460..160582 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0168; phage(gi418489857) 6e-18 MTLIKINNQNGYWLINGKKYQEATEFEKDILDYFFKKSKK 160579..160764 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0169; phage(gi418489858) 2e-12 MKTLSKITTVTAIIYAFAVSESHDTMALMSAVGLLLISLFMNVKEQEITNFFRDESEDKTI 160879..161451 PHAGE_Clostr_phiMMP02: putative essential recombination function protein; RIA_0170; phage(gi414090421) 5e-39 MEKLIKIQSELKAPKGQYNSFGKYKYRSCEDILEALKPILLKHDCTLVITDEIKQIGDIIYCEATATISDKNTQISVKAQAGIDPTKKGMDISQTFGASSSYARKYALNGLFLIDDTKDADTNEHKQVLDTKPKIQKANEPAMWLNKDTEQWAKLVSSIDEGKTFTVSDIRKKYKVSKETEAELKKLGIN 161451..162209 PHAGE_Persic_P12024L: hypothetical protein; RIA_0171; phage(gi399528499) 7e-08 MEEINKLGGLGASEIGALFTQQGLKAKTAQTLAYEKALELILGQKKHLTTTAMQHGIFNEEEAYNVIIQPNFQNTVYQSDVSFEIDKGLWATPDVINPIDNYCMDIKCPYTIYTFKQNIDKVPAYYLAQVQMQMLATGFNKGYLVYYLTSNVMDEWGNKIEFDIPLDQRYHIKEFDADIEFQTEIKERAKTFFEMRDTIKSHLEEAPLITDVEYMDLAMNDHRITRFKDKSNLLAWKGLIYKNEREGYLVIE 162234..162530 hypothetical protein; RIA_0172 N/A MVQSFYGSINYDKLLENLKSGKLKTFKHENGTRYINVNVYINDEPDKYENDGSISSPLKEEYHKDNIKSVFIGNLRKSTPKIQEANADDFQDDDDLPF 162534..162713 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0173; phage(gi418489867) 2e-23 MKIEGSNFNLGKMGTTFFIWNSERTIYLDAKNITEAIREAKEKTNGTHFKKEKEKHPHR 162999..163610 PHAGE_Lactob_1: DnaA; RIA_0174; phage(gi219563230) 4e-06 MSVNTVRDARNRLMQLGLIDFKTPQKRSKGIDGQTKYVFPTVSTGDTVLDTVSDTDIDTVSDTVLDTVSDTNNKLNKTKLNVLLEKEPKGSLSDLEEEGKAKPNNDIDFEKLLNFISDKTKRKFKTINDQIKRKYKARLKEGYTKEDILEAIENAVKDKYHMEQGYKYLTPEFFSRPVTLDKYKNTTSQKATEKKKTYGIWSV 163623..164678 hypothetical protein; RIA_0175 N/A MAFIDLASVHSKMRKLRTKGEIDPVYFSFETWNDFNNGKWLMGSRKCTLLIGGEPNHGKSQVTNEMVMQLIEKHHFKVALFTTESGDVEKVFTQFCGMYQGKPYTKVRPDGKPNKYAMTDEEVAEAEDFILRHLYIFKQDRKDTSYQKLDNIYKELAMAEANYGIKFDCLVIDPIYDIDDFEPKASEVLRVLNRINLEAEENNRFDIIVNHVAETAKVTTKSGKRIKLTALADEFYGGKNNNRKAMLQILVHRPEPNENPEGDEEYVAENQTNIHILKIKPEGVAKWGIYSIYYDWRSRRYYEMFDDKVQFAQCTKFKDRRPNQEFKIEEFRTTPSEAFNTINYETDEMPF 164653..164943 hypothetical protein; RIA_0176 N/A MKQTRCLSDEVKEAFINFVMDANAKTESVTDVHYQKLMSDKIRFITDWSHKYLSECDLKVLQKHPLSPEEGLKGLEKLKKQNGTKEYSKYSKYQNK 164897..165220 hypothetical protein; RIA_0177 N/A MVQRNTANTANIRTSELPNQRLIHDDKTAFDRKYTTESRDCKVKDPSLPLKMIAELAKKKTVFSEGLRNFVELEKQKKFPKEILTIKDTKEWKELHSNEARSNEEKP 165169..165333 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0178; phage(gi418489870) 1e-14 MEGITLQRSKEQRRKALEVLEEAKKLNRPVVFLKRGQSLEQKPKRRNNPNKKAK 165330..165617 PHAGE_Riemer_RAP44: S-adenosyl-L-methionine-dependent methyltransferase; RIA_0179; phage(gi418489872) 1e-49 MKYQNLFNQDFYPTPREVLDLMELDVNNKTILEPSAGKGNIIDYLKEYGAKEVLFCEINKDLAEICKNKANQIGTDFLELKPEAVAGVEAIIVNS 165643..166455 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0180; phage(gi418489874) 6e-153 MKNLIITVSGGRSSAMMARHIQVSEKYKDYNKLFVFCNTGMERPETIDFLKNIEKHWNIPLVKIEGVYSSEMGVGVSYKLVDWDNLDMTAKPFENAIAHKNKGAFNGMPNLEAPFCSEMLKTLPAKKIADDIFGVNSYLKAIGFRKEDMPKRISWAEIKEDKIRIFPLLTDFQFPIGQMELNKFWDSQPFKLEIHNKYGNCELCWKKSDANLIDVIRKGTRFIDWYRKMEGKYGNTSFRGHKSIDDLVELSKLPFTGELNFEENKCVCNF 166512..166697 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0181; phage(gi418489875) 3e-29 MNARDKEAIREKLEELRYMKQLYEGHKKKVLEKYKELRKKIIDNDNQIQQLKQQLCKNKHL 166676..166993 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0182; phage(gi418489877) 7e-59 MQKQTFIKAIEAIKKQYEYDKEVAENLSKVFTDVSENDLMPKNHYLSNMLLKILQEEMNDKYDYIGWFCWETDFGNKQLCILHENKKIHLKTPDELYDFLKNNKQ 167100..167396 PHAGE_Riemer_RAP44: DNA-binding protein; RIA_0183; phage(gi418489878) 1e-50 MEKLIKQIKQWADDKGILAKATPTKQALKTLEECTELLTAIADDDGTEIKDAIGDIVVTLIIQCEMQNLNFIDCVQSAYDVISKRTGKMINGQFVKDI 167393..167638 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0184; phage(gi418489880) 1e-45 MTTNNWKKVEEELPNENETVWITNGKGWVALGCLAYVEDGYLWGISNGEIYPKDGKIMTEADLEEDLDVVFWHSVPDMPKI 167662..168411 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0185; phage(gi418489881) 2e-146 MSRYNLFSGNKTITETVAKALGFQIDKDTHFGWFTKDIYFQSYFYLSKRFGFPIEVDDYKRVTIWEFAVKDFRITVNLDSSKVIFMIFGKYQESAIVKNTPYNVKFWREISKKIAEYLPFHKEEGWSDFQINKYRELLSDFRQENKISKEVSEKEIWDKYGIAFYEKLIEYNNNLVGVSYEDYEKYGDYMNSYRRRALRTLEQFLHNMLTPIWIRDVPLNIKGFMTDSEAFYYTKRYDNNIAIKLINEV 168595..168750 hypothetical protein; RIA_0186 N/A MRKLPNDISRCANKECPLKEQCLRWLDTGNGIVPLSMFEPKDGKCKHLIEK 168750..168959 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0187; phage(gi418489882) 3e-30 MTILRKQRNNMDLYLFYYEGEEDGWTFEIEANNPYEAFNKAYRSYGPQVKEMMYKVIEKGNNKKIEILE 168960..169325 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0188; phage(gi418489883) 2e-66 MKLQSMIDFVLSQQYEPIKGKIFKKRCTNYAEFLRMPLKLSMLIPCDENENPFKKPEFLRAKSKILFEGFSLEGNKVCYSDFYFGSIEDLENKKVEDILYEIPEEEMPFLTSTAINLIHKQ 169332..169583 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0189; phage(gi418489884) 2e-41 MKVTITALLLVGAFLFFFKIEQQPYKYTVVDKIVGTRYTPAYYIIIKDEITGEIDEKQVDVEDYATLKKGKTYISEKLVIKLR 169580..169852 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0190; phage(gi418489885) 4e-48 MNKIILTGLFLFTLLSCGEHKEDTYQDFDFTITEKISLKNNKGGYDYFFKSKDSIMEVPTLAYAQYDVGHTFKYRRITSGLRKGMVYSRE 169942..170271 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0191; phage(gi418489886) 2e-57 MKKALLFFALSLLILGAFISCGKKSEFFKVGDDVHTTQETVGTITESDFDEMLRISNAKDGNAFGQMIMDGKMFIVPKNSTLNVEEIKIGRIKAQYQEKSLWFNSSHVK 170511..171461 PHAGE_Riemer_RAP44: DNA-damage-inducible protein D; RIA_0192; phage(gi418489887) 2e-157 MSELVHNTDADGLSFEDFKQENGITYWWASDLMRMLAYPNMKSFQKVLDRATKAFVSLNIPYYDNILPEQRTIDNNTFQDFKLTRFACYMVVMNGDPKKIEVAQAQAYFAQQTRKFELYIENHQEIDRLLIREELTEGNKSLNSTLKHAKVQDYAKFTNAGYLGMYNMRNWELANKRNVKKEKLMDSMGRTELAANLFRVTQTEERIKSKGIQGQHNLEATHYEVGKEVREIIKKNVGKNPENLPQEKQLPDVRKELKAGYKKMLKEDKQKKKNRTIIYCNKNAPIVGAFFMHQRKNKKFSTKNLVVKKIVVYLQC 171605..171925 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0193; phage(gi418489888) 1e-56 MLNHQTTAPTANNSSEVQNQKTIDRAKRLSEFNSCFGVDQDNLFYLVTEQMDMLTGEIRKGYYQNAEQRVANLASLLWAMHNRLPKDFFEDVELLTDDILLNTKSA 171928..172677 PHAGE_Riemer_RAP44: phage antirepressor protein; RIA_0194; phage(gi418489889) 3e-135 MKALIKITEQNGKQAVSARELHSFLEIKDKFADWIKRMFEYGFIENIDYQILSDFSEKIGRGRPSVDYALTLDCAKEISMLQRSDKGKQARRYFIECEKKLKTTLPTTYKEALLELIKKEEEKEVLLLQNQEQQAQLEAQAPKVLFTEAVMGSKTSCLIGELAKVITQNGYEIGERRLFKYLRENGYLGRKGERYNIPNQKYVEQGIFELKKGTRSGSGGVMHTTITTKVTGKGQVYFVNKFLKHLQSA 172740..173054 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0195; phage(gi418489890) 4e-58 MNPTYLKQIMQLAWQFFKQTGLKFSECLKKAWANYKLKKRMQQGIVRFYFQKVDGSIREAWGTLKADLLPETKGSERKENPTTQVYFDTEVNEFRCFKKFNLMY 173157..173576 PHAGE_Riemer_RAP44: bacteriophage lambda NinG protein; RIA_0196; phage(gi418489893) 3e-78 MIEAKAIQKYKTKTRGKLVEQAQKLVNSYVRQRDAINERGDFICISCGKYKPNHQCNAGHYFSRGGYPSVRFDLDNIHSQCIQCNLHQHGNLIPYRENLIKKIGEKRFEQLEQLSKMSIKHDRIMLIELIERMKQQLKK 173582..174040 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0197; phage(gi418489896) 1e-85 MKIKVNNTEVEAYKLLMRKPYAEAIANGSKTVEIRDFSDFYHKMFVDKEKEKTFNKYLENPDGSMGIDDIVREDITYIRFTNYNQSWHLDVEIYPPHIISPADEEDVKFVRESYGFNELDEEPAKFKNLTDEDEVPMIFAIPIARVINRENI 174072..174206 hypothetical protein; RIA_0198 N/A MPEPYAVRYTGGKRQAYRTKKDYEKGKLSSFGRTNRRLKANGAI 174213..174917 PHAGE_Riemer_RAP44: adenine nucleotide alpha hydrolase-like protein; RIA_0199; phage(gi418489897) 8e-135 MNLLADTMKSIKALSEKTDRVLLFHSANGKDSIALLEMLSPYFKEVKCVYMYMVKDLSHINKYILWAEKRYKNASFIQTPHYAYYNYKKLGICGTNEVNYAQYSLSTITEKIKEETGIQWVVYGFKQNDSLNRRLMLRTYENEITNEETQKIYPLSKWSNKEVLQFISKKRLIEPLQYGNVGNTRSQGTDVTNLSFLLWCRANAPEDLKRVIKEFPDTERILFEYDYEKQNKAI 174892..175617 PHAGE_Riemer_RAP44: ParB-like nuclease; RIA_0200; phage(gi418489898) 1e-134 MKNKIKQSETRTILRSQITPAPYNPRKITDEARKALKKNIKANGIIGGMVWNELTTNLVSGHQKLSIADEVNKYNPSTKENDYEIKVEVINVDLKTEKELNIFFNSKSVQGEMDYQKLALIVPDIDVDLAGLDDIDLSFIEVELPKDLNIEVPTFEPQEEKKEKAKTQDSEEKASQEEKKQAVKEAKAKVKEGAVYEGDPYITLSFDSYENKVFFLERFHLNGDTKFIKGEEFAEIIENGE 175607..176089 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0201; phage(gi418489899) 2e-91 MENKVGRPTKYDANYHPAQALKFCLAGLTDAQMANLFEITEGTLNNWKNEHPEFLESIKKGKEEADANVASTLYKRALGHKEKRQVPIKVKQYDERDRQIEKVEVVEVEDYYPPETSAQIFWLKNRQPKAWRDRQDIELNQKGSINISDWLKINNQQEKE 176184..177482 PHAGE_Riemer_RAP44: phage terminase large subunit; RIA_0202; phage(gi418489900) 0.0 MPIKTQEVYNPLYTNKDKFIILLTGGRGSAKSYNATTFVERLSFEAGHKILFSRYTMTSARISIIPEFEEKIEKEGVQEYFTVTNNEILNKFSGSSVLFRGIKTSSGNQTANLKSIQGITTFVGDEMEEWESEEDYEKLILSIRQKNKQLRVILILNPTDSDHFIYKKYIENTHKIVQIDGVDVQISTHPDVLHIHTTYLDNIENLSEQFLSNIERIKQESIEQCTINGKLAQVLFNKSKYAQKIIGRWADMAEGVIFTNWKEGDFDTSIPYCYGQDYGFSIDPDTLVKVAIDHKRKIIYADEKYYGNNQLSTDDLYLLNKSLIDRENDLIVGDSAEPRLIEDLRKKGLNIKPTKKKPGIVSASILKILEYQIIVTENSYNLKKELRNYAWNDKKAGIPIDKHNHLIDALRYGFIELEEPIQNDLQQIASIL 177596..178954 PHAGE_Riemer_RAP44: phage portal protein; RIA_0203; phage(gi418489901) 0.0 MNTIAQEIEKHKGERTLPDITLFNSQYEVKKHKIFTDLVKYPDRTVVSDYTDEKGNKQKQKVTIPLNRIGLPYQKKIVNIATTFLCGEPIKYTNNLEDDELFKAFLKVIEKNKMKFVDREIATSVGRFTECAELWYFTDEPNEHYGFKSKYRLKVKVLTPDIYSLYPKFDENDNLISFAREFKNGNKTIFEVYTDERIIRYEQEKEWKKISDIPNAIGKIPIVYYKQENVEWADVQTAIERLEHIYSNTAESNDRFSFPILKLKGKVTGQLSQDKSGRVLQLEEGAEAEFANQPQANQSLTEETDRLERDVHDFTATPNISFDNMKGLGNMLAGSNAEFLFLSAHLKVMDKLAIYIPALQRRASIIKSHLQMFNVKLKNDDLDVEPIITPFIINNEAEFVRFLMEANGNKPVYSLEHSMQKLGIKNPKEMMQQIQEEDDRINESANSKSFAI 178954..180009 PHAGE_Riemer_RAP44: phage head morphogenesis protein; RIA_0204; phage(gi418489902) 0.0 MDFDTLHRKRVKQYGRTLEQIYNGLIVRVSSLVVKSDITDKIYRFRNNKKILLEIEKALDSYYKNTLNTINIGTEKQWLFANEKYNALRIATLERLAHKLSKETYIREIEKVAKTPHNLKALHSFQQRKINDFTLSERVWSITQQVKSELEMAIDVSLSEGISANELARKIKKNLNEPDRLYRRIRDKHGNLVLSQNAKYYNPGQGVYRSAHKNALRLAKEEINTAYRTSEQIRIMQNNDVVGVEIHLSPSHKIYDICDELAGRYPKNFIWNKWHIGCMCHRRTILKSDEELIKELNNNQELPPETSKYYIGATPKQFNQWVKDNKDRFKNWKYKPEFLEQNKEFINLKST 180014..180235 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0205; phage(gi418489903) 9e-37 MGNLEKSKNINEIIESTSFREEIEEAIESGMFTDYAYDGEDEYPVDEFDSIFALDAVIKVIKKYFCTEENTNT 180265..180588 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0206; phage(gi418489904) 8e-57 MKLRGVDRAIEYAKKRPSKYGSNFKIDFLNGYNIAIEDTKAVEMFNALSRILGYENIEQAKKEAKNVLDRLELHGIEKVTLLDSEGNSQQLPDIGKDLFICKPPENN complement(180743..180946) PHAGE_Riemer_RAP44: hypothetical protein; RIA_0207; phage(gi418489895) 7e-34 MDNDKIKERILEILDLFGMTGTKAAEIMGVKASTFNCKKNDNNPRHWFNQKNLDDLVAFIKREAERL complement(180928..181077) PHAGE_Riemer_RAP44: hypothetical protein; RIA_0208; phage(gi418489894) 6e-22 MKYFLKNIRSKWKEINTEGYEKTFVLELSLEQIILIGITVIGLIWIMIK complement(181362..181562) PHAGE_Riemer_RAP44: hypothetical protein; RIA_0209; phage(gi418489892) 2e-13 MQKGFTFTNYGSHSLYELSRGEHDYCVNLQGEVMTTNESKTKDLKVDIPIPKNKSEAERWFKKFIG complement(181606..181872) PHAGE_Riemer_RAP44: hypothetical protein; RIA_0210; phage(gi418489891) 1e-45 MNEILHKRIADMTTFEMMESAYLIEKARSITMSIDDFAKTMGWDNRKVYKLLKGKILPEKIIRGGYDSLRQRKRPVFITEEVLKWIKN 182005..182661 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0211; phage(gi418489905) 1e-112 MNKKILELLKTKYKDLGLSESILKVTADRLVRTVKEEAEETEITQAIESVESELRIYQSFEDRNRTLLKEVKDLKEKLEKNEPNPTPNPNPEPKPNEGNPEPNPMLELLKELKGEITALKSEKIQQTNKEKLTAKLQELGVNENFYKLHIDGKTFENDEQINEFANQLKESQDAFAQSINNDLLKNQSNPLFGNRPVEGQVSADVQDYIKTKFNQNQN 182665..183030 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0212; phage(gi418489906) 1e-56 MKKVKKTDGVGRQIVVFDQVDATYPGGVHIDAEKAKERFADGVVPAGTLLIPDTEGMFKPLNLSAVNVVGAIGLTAHDVVIDDMPLVAVVMAGTARKDALPDKEKAAVEFIKTVLPRISFV 183051..184133 PHAGE_Riemer_RAP44: putative head protein; RIA_0213; phage(gi418489907) 0.0 MINANNIIPEFSQANLEAVLNAYPLGEFQYRTLFPLEFNPTLNFASIEGTMGAKIMADIVAIGSKASRKGRDFVESIKGEIPKIEIARDKDERDLLRIQQLRNSVALYPQNQAIKNQLIDKIYEDVTFVADGVNARLEWVAKQLISNGKFKTTVANNAGGVANVEIDFKIKTQNAKKNWFTAADADPIKEITDLQSEARGKGYRYTTITLERDVLDVLLANPLVRQFVHGIPVNSSTVLPNITVEQLNAQLQGKGLPTFRLVESFVAHENKAGQVEATNGWEAGNILFSVSPILGTTQYTTTTEFNMNFPDVMSKAVKDDFILVKTFGHQDPISISTKGTAFAVPVLNNTRQNLILKTKF 184133..184456 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0214; phage(gi418489908) 2e-57 MTIGEYIKEKLNLWSVPYSDALISAELSKLNLQMESEYNNETASKLDLFFYNLLPEMLLLPNSVSEGGYSISFDKKAVESYYQMLCEKMGKPNLLPKPTIKDISNQW 184450..184773 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0215; phage(gi418489909) 8e-60 MVKQYPYILKLFQEAEATFNQATAEWEGGEAKWVTVGYCRDEINGGGSKITKTDGEAYAYSAVVYAPKHCPSINTGAKIQVWNGNVLRLEATVQRFAKEQLHTRIWV 184764..185207 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0216; phage(gi418489910) 1e-75 MGLVPKFSMNDINAILKQAEEDYTQKLIRALKFVGEKCVNEAKANGTYQDQTANLRNSKGYVIVADGRVIDENFSISANGSVPSKENPLKYGRELAYQVAPKFRGIALIVVAGMKYASYVESKGRVVLTSAEQLAKIQVPILLKQLQ 185204..185614 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0217; phage(gi418489911) 1e-76 MKRTVLDGKQWILDLLLRAKVNEFINGQIYKDNRPVNSNKEDIVINSLTMTNQMLQNGVFNINCYVPKKSVTVGGITQLHKDNKRLKEIADKVYAILNDVWENDYNLDVETHQDFEEQNENYYNFRVQLNAYPTFN 185642..186148 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0218; phage(gi418489912) 1e-92 MSNKVNIGLASIKIGEIASDGGMGTSLEQIGVTNQGSCKINFEDAEKKEFFVEEYDDPFHVEYTQGKINIQYQIANPDIDTIVKVFGGSKSGSGPSEVYKAPNQSVTIERSMEITPKKGLGFKFPRVSITAKFTPDIGKENLLMLDITASVLRPTKDGEPRFSMFKVA 186228..186689 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0219; phage(gi418489913) 4e-81 MTTTEQIQAEKKELDLLTGKGFEIEVTSFFGKKRKFQAKKMALGRMLRLSKIFITMELNDEALNSKDFQEQLSAQYQAVLQNARKVAKVIAVCVTDNKLLSWWIQRQVLKSYTSKEILNFAQTLLKEADYANFILSIALLNGNRPTKANPIEK 186707..186892 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0220; phage(gi418489914) 1e-32 MGQICHHFGWTLDYLLWEVDWRIVQRMLIDAPNYDDDKKEKEIDLTEQTPEDLEKMLEKYR complement(187063..187788) PHAGE_Riemer_RAP44: phage antirepressor protein; RIA_0221; phage(gi418489879) 6e-136 MKALIKITEQNGQQAVSARELHSFLEIDSRFDIWIKRMFEYGFIENVDYQCLYKNVQMPNGGQRQVLDDYALTLDTAKEISMLQRSEKGKQARRYFIECEKKLRTGAYALPQTFAEALKLAAQQAERLELQQAELKKQAPKVAYYEEVLQSESTYNTNQIAKELGMSAITLNKKLQDLKVQYRQGGTWLLYHKYQNKGYTKTKTHTYTDTKGATQTSMQTVWTEKGRLFIHEALSKRLQSA complement(187792..188121) PHAGE_Riemer_RAP44: hypothetical protein; RIA_0222; phage(gi418489876) 9e-56 MLIQETTAPTANNSSEVQRSLKEVLTVADLTDYKLRYLKEVLTDELDNFHDTINEEIKDERKRAILFEKSNRVIALFAMLKDLLPQVPDYFEQVNMLLAYDDLRTSKSA complement(188460..189152) PHAGE_Riemer_RAP44: Ig domain-containing protein; RIA_0223; phage(gi418489873) 7e-129 MKKVLLFFALSLATLGTFTSCSRDDDSTTVADNYSITPTEVSIKYDQTHKFTIKNNGSEVSGSSFSWKSSDEKRGTVDANGLLTAKKVGTFDVTATKNGKTLTSKVTITPYQTFFTEPLMFFGKTKADVKASETRKLVRETATALAYEGENGSVNRIGYIFDNNGNMTSAIVTFPTSSSSTDRVATFYKERYNVVTADSDIIYMSHLDEPIVMGMGYNSTLGFHVIYTKK 189339..193520 PHAGE_Riemer_RAP44: putative tape measure domain protein; RIA_0224; phage(gi418489915) 0.0 MNTNNGGLFFGAAIDMTQWRKDLREIQADILGLNQKTQEQTRQMDTSFKNLSIGIAGYFSGQALMGFTRQLINVRGEFQKAEIAFSTMLKSKEKANELMGQMVDLAAKTPFGLNDVTEGAKRLLAFQVPAEQVTETLTRMGNIAAGLGVPMGQLIHVYGQVKAQGKIMTNDLYQFMNAGIPILSELGKVLGKSEAEIKDMVSAGKIGFPEVQAVIKNMTDEGGLFFNIMEEQSKVLSGQVSNLEDAFERMLNKIGEGNEGILYSGIEGATYLVEHYEDVIDVLTILVATYGSYRAALIVTSVLQKAQIAQQAISNWLSLAKSIRTAKDAQALFNLTTSANPIGAIIALIGLLATTYVTYGDEIKKLIGITNEYDEINKELSETLSEIDQKGTEEISTLGKLYKVATDDKKSREERLAATKRLQNEYPSYFGNLSAEIIMAGKAANAYNSLREAIIASAKARAIRSKIEEIEKERLEGEAELINKKEEILKKYRKGKKEGWKDETVNYGRDEFGKSNIVTFRGEDNKKALASQFVDVNKRLKEYQKETEKQTQVFADMAEEQERISAKYNADRQKREEEEAKKQQTSLSNTANETKKKAKAHQKALAEVYSKNSIKDLEERISLWNNALERATKDKDGNYQVKVRGKDKYGKEYETGQVVSKDKALEELKVLNEAKAKIEEEFRIKSTEEELAELKRRINLRDKYLQIGMNRPELINEDTVNNLFPDLKDKSYVQVLEEKRKAYLGLIEAQKATEQTTIDLIFIENELKNANGTETFMQGVNDRISELKEKYKGAELIDKLKKAKSLQLGGTEEDNLERNKAYASALKEAQKDYDKFYRDLLEQQKTYEEKSLELQKEYTALKATERYKNATPEEQKKIDKHYKKEQSKLDMDAFKESGDWALAFSDLEYMSQSTIERVIKNFEDFKRAKEQNLEPTELRELNDTLNKLRAKAGNNPFTGIISGVKGYVQANKDAKTAQDEYNATVDKFGKNSPQAQEAYRKMTDAEQEAIKAKQLLNAQLQKGQDIFNATIQGVTELADAFGGMDDATKDAIEDITAVGNAAFDLAKSISSGNIAGMISAGLKLIGSIFKALNGDKRREREVRRQEQAIRKLKDAYDELSHALDKAFGSQKQKGQRELIQNLRQQQQAIQNAKNAESQKKKKDQGKIDEYNAQYKATERAIKDLEESIIKDVLQTDIPEMAAKIGDVLEDSFLRGKDGLKDLDKAFNNMLRGIARHQLDLFLQDEMKGFYEKARSYAGFDEKGNGSFDGFQDWEIESLKSMWQSISENGRKFLEGMSNVYEGFQELEDPDSLAGAMRGMSEETAGILAGQFNAIRIHVAEIQKNQGFGLDIAKSSLLNLMKIEENTRNLYQMRKDLAEMNAKIKSNDTRGLGL complement(193523..193885) PHAGE_Riemer_RAP44: DNA-binding protein; RIA_0225; phage(gi418489861) 4e-62 MKINTKKDYQRYLQEVDELMKKGEELLTSTELNRISVLSSALEEYEDAFYPIAQPKTLPEMVELRLFEKKMSQTDFAKVSGISLSKVNQIIKGNRKVDIPFAKAVYQVLDIPADFVLSHS complement(193882..194175) PHAGE_Riemer_RAP44: DUF2136 superfamily protein; RIA_0226; phage(gi418489860) 5e-53 MVIISKAPLKRYLNDRPDHSIEVWRWYLVVKDADWSNFAEMKQSFNSVDSVGNGLFVFNIKGNHCRIVARVIFGARTVFVKFVGTHAEYDKLNFKKL 194232..194663 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0227; phage(gi418489916) 5e-80 MKLQDIIQQAKKQGLCEEWYNEMKCYPTLETLCRMFFKGDDWALKNNFPSEKMLHYFRGETEQYGLFLDALGKVETMSKMAFFGYSNVELNYGDFSVSSLILRGNSKAKITAKDNAIIFVTVLDNAEVIVEEQDHAKVKIFRR 194660..195763 PHAGE_Riemer_RAP44: putative phage tail protein; RIA_0228; phage(gi418489917) 7e-125 MTKEVLYILNSKYFKDFGVFISESKGLLDKPKLKSRRSYDWAEYHGKAVDLAKPKYDEREIELKGWVEGETWSQMKTNFDTLLSEFDKEGLQRLVIEYLGNALVFDVYLSGGVELEKSFKEGKMVGFFTLKMKDPNPIKKVFKLIGSDLQLSFNAQSWVDINIDGINETRKGNITINKAVPSRELSGYGFYGRNLARNTEFKNGGEHWSKGYPQAEFLPNERAVKITSIDGQDYNQIDQNIKCEKNTEYTISAFVKGIGSAFFYALEMKENGTYTAVYSDNYREFPVNSEYKYVNFTIRTQSDAAYFIFILRAFSNNTVWFKDVKVEKGNNATDCTPAPEDTHYITISGNIDEITNLQTNAEELWSL 195751..199644 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0229; phage(gi418489922) 0.0 MEFIVIQGDKPLNLNNRKPLRSVTKAEHRQSLLSEDVINITVESKTPLALQVGNHIEYENRKYTLNSAPKVKKEQGYYAYDLVFEGVQYLLRDKVYFNLDAQGFQNTADFPLTGEINIFLTTLITNINSISDFTWVLGEYPQNTETKTLTFNNENCLAVLQKICQEYDTEFEIKQDLERKSYTLNIKKIGETLNQTFEYGKGNGLYSLSRVNVNDNVITRLYVFGSTNNIKSGYRDYSQRLRLPISHGKEYIQDDAKVKLFGLKEGVKNFDDIKPTFKGIVSGVTNLENGSQEIEVSNMDFDLNETDSNGTKYLLNDTPAKLHINKGNLAGYEFELLKNGGYNHATKTFRVKQFTDERGQKFPEAGSVFSFAVGDEVTLLDIALPEQYITNSENKLLEEGQKEYEKQSVNNLKYNLELDPLYLQQIGDGTSIFFKIGDYIRVIDEPLKIDKTTRIVDITRDLLDEYNYKIGIADTYEISFVASLLTDIKDTKTVIKTQEQINRRNYLNGYRNLQELRESVFDVEGYFDSTHIKPESIEANMLSVGAKSQQFALENISLNPNIEGNPARTFISGGKLVHFSLEDDIREWNLLPYSRNDLLNQVYYVYAKCSRGSSNAMWYITTEQIRFDSRSDYYYFLCYLLYTPKDSKREAEAMYGNVFMHGGQITAGRIKSLNGQTYFDLDSGEIAGTIKFKSGNGYVEVGSAIQQAVDAVSVGGRNLVLKSNIEKTGRYNVYDTIYNDNPELIGKEVVFSADIETNEDNDLAIYNSNGTSLVASASSSRRIVSAGKTRISHIFKLAGVNNGQPRRLRFETYSYSNLPYKVSNVKIELGNKATDWTPAPEDVQAEINAVKAKADQLDNLGTMAWQNSVEKAMLGSTIVQGGYIKTELLNASAIVSNGGGATTSQLNSAISSIVVGGRNYIKNASKGYGMFNNNRRVWELTQGEENGVKWVSGTSVNNGNFYISTYFHLLNNISVFTEDLTGQETIQSMEVKPTHDMYIGLWENNRKFCPANVWTKIENSPYNNTRFMGIYAIWNNEGSVPSTAKIYHRNWKLEKGNKATDWTPAPEDLDTLFANLKQGISNMQTSLSDVKNKTDNFSSIQGGLMMANLMSVGSNQANQNAFISGITDEGAMSVRFGAGSNYANKHNAPFRVLDNGKVYGSDMEITGGKIARFNISGNTLSGQGIADPNDYLEIKSSGSILSYKKSLSSGRESYALINNDDSILNGNKNNILRLWGRDVNNYTPYNALSIRADGQYATALNIESGDIRVGGEVGYTGELFLGGVWLTIRKGIITNYS 199671..199994 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0230; phage(gi418489924) 1e-56 MKTKNLQKVNERVATTLMESIGEKQIYYQYETDYNNKTPQMVNFSTQLQDGNNLSGSYSKGGGFSLNGQGVKNVEDLQVVNSVLDTILEIINGFEVEKKEAEDGNNK 199978..200310 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0231; phage(gi418489925) 2e-61 MVIISKYLVPRGYTAMAVFPFIFLKKKKYQSNRYLLNHEKIHLRQQLELLILPFFVWYGLNYLWNLIKYKNHREAYRNIIFEQEAYENQNDLEYLKNRKLWQIFNKRRTL 200307..200828 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0232; phage(gi418489926) 1e-96 MIKEFIITNLMNIHTGTASQKILGTIKLAAAPAIGISLTERFIGWYIENKIFMTFVFVALFLDHILGSWVHWRKRDFSFKENVYGLFGKTTSVIVGYVLFEMVHQIVKDVDFIAIYFKVLLQLMVLLYPAGSAMGNLSILTNGKFPPVGWMKKLRKFNEEADLETFKTKKYEE 200818..201396 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0233; phage(gi418489927) 7e-104 MKSKFLLIIAVLLLFSCRTRKKTDAHIQSKTVEVKLKDSISVREIKQEQTTKVQDKLQIDKHSKHQEKKIEIFGKTETDKPFVFHEVEGKDTLQSIIIKGNAQFSVKSFKNSNQHTTEKKEVKEYLNEVQELARNTVSQRTINEVANEIRAVSNEVKSSGFTFGTWVWIIIGSILIIAGAVLYFYLKRIKLF 201419..201973 PHAGE_Riemer_RAP44: N-acetylmuramoyl-L-alanine; RIA_0234; phage(gi418489928) 3e-105 MYLKTFPIAGHHNADSGAVYNGRKEADLTKEARNLFVKYFPNGKNELILDRDNETNTQLQRRIKPGAGSVLLDIHFNAGPTTATGTECLVNRKDFVNKNSMSYRMADEISKATSEILGIPNRDVKCESTTRHGRLGILNLGTGCAVLWEICFISNPNDMKQWDLKKEILMKKIAEIAAKYDDIR complement(202215..202562) PHAGE_Riemer_RAP44: hypothetical protein; RIA_0235; phage(gi418489850) 2e-62 MKDLDLSKLKGEEIAQWLLNNKKATAIQLSSERTDTDDGFMHILVHKDEYVEIIYSYLKIDEDDVMQNFTIYSKRWGNIDNSYFELQTFEGEIFTGESDKILCGVLSLGDLTTLK complement(202584..202862) PHAGE_Riemer_RAP44: lambda repressor-like DNA-binding domain protein; RIA_0236; phage(gi418489929) 5e-45 MIVKQILKDKGMTAKELAESIGMSETGLSIALSEKGNPSLSTLKKIAEILNVSLAELFGGNGGGIMGFVEYKGIIYKIKSFEDLQKILDLRK 203228..203839 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0237; phage(gi418489851) 1e-111 MRLYRHHSVEFQNLIEKAKDKFVTDKSRRFNFDNKNKAEFFFYADAIEIAEAYKIDDEDGEVTRLFTYEVSDDIKLLDLRKEENRRKLIKIAEILAEKDNESRLSASKSLLHFSYYRNKRDKKRNEKLAEEITSYSTTVEDIIKKENLFEDVNHFNAQTIVDYEIGVILKKELISLGYDGIKFSGGRNNGNEIALLKPAKLVK 204161..204502 PHAGE_Riemer_RAP44: hypothetical protein; RIA_0238; phage(gi418489852) 1e-63 MSYFLSHKTPEFLLAELPIKDGSPNDDRLWVYCVKALSLIEFINLNQIKAHGLRLADEKTYKNERWGIAFVQNNCEYLGLDESEVIKNAWKFLTDYFDWEDKNIDESSTSTLN 204502..204684 PHAGE_Riemer_RAP44: DNA-binding protein; RIA_0239; phage(gi418489853) 2e-27 MNEVEKLILISRKSAKELAPILNTSETQISRYKKGKTEITVALLKKWCEILQIDIKKLFN complement(204723..205967) PHAGE_Riemer_RAP44: DNA breaking-rejoining enzyme; RIA_0240; phage(gi418489923) 0.0 MLYKTGLKAQKCTNSISATPNVQHFNLDEMENYWTNPKVKHYPLETGKDWYVWFRFNGGNPIRVKQGLNQIPEFEERLQEAYAMADVIRERLESGWVPQSAKVRVKRINLIDAVIFGFEEKKKTLSKNSIDNFRSSVNFFIEAVKELKYHRMQVSSFERIQAKEVLEHLKNEKGWSNKTYNKHLGFLRSVFHEILDADYIKSNPFRDIKNLKVLKKEANVPPTNEEMKAISNALQDYCFGFYVFCSTIYYCGIRPAELVQMKVSMLDLGNELINLPAEITKTDADRVVPISENLKSLFSKFDLSNPHNYLFGTCVPNGGRHGIKNRYFEPNEFKVKEDTANKLWRKLIKDGLGIDKNMYSLKHKGADDKILAGMPIETIQAIFGHSTQKMTERYARIMKLQRFEEAKKIKLPSF complement(205999..206086) tRNA N/A GGAGAGATGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGACTGTAACAGGTCCGGGGGTTCGAATCCCTCTCTCTCCGCAA 205999..206015 attR N/A TTGCGGAGAGAGAGGGA complement(206213..206575) Integral membrane protein possibly involved in chromosome condensation; RIA_0242 N/A MKTILYIFIGGGLGSVFRFLVSRYTAQFFKLGTFPMGTLVVNVLGCFFIGLLSNSLMKQESDIIRYLFIVGLCGGFTTFSTFSYENLVLWQNQDYVTLFSYVVASLVLGFWAVYLGFKVG complement(206732..207679) PHAGE_Lactoc_949: putative ribonucleotide diphosphate reductase alpha subunit; RIA_0243; phage(gi327197952) 2e-24 MEEQNILDCVIIGSGPAGYTAAIYAARADLKPELFTGLEPGGQLTTTTEVENFPGYPNGITGPEMMMDLQKQAERFETKVHYEMITSVEFSKEVGGIHKLSTGSREILARTVIISTGATAKYLGLDDEKKYSGGGVSACATCDGFFYKGKDVIVVGAGDTAAEEATYLANICNKVTMLVRKDHFRASKVMAQRVEKTPNIEVKYNHELIGIKGENNLVERAVVINNQTQETSEIEVHGIFIAIGHKPNTDVFKGQINLDENGYIITEGKSSKTNLPGVFAAGDVQDHIYRQAITAAGSGCMAAIDAERYLGELKG