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The map label for this gene is dsdX [C]

Identifier: 239618136

GI number: 239618136

Start: 1900092

End: 1901435

Strand: Reverse

Name: dsdX [C]

Synonym: Kole_1769

Alternate gene names: 239618136

Gene position: 1901435-1900092 (Counterclockwise)

Preceding gene: 239618147

Following gene: 239618135

Centisome position: 82.59

GC content: 45.91

Gene sequence:

>1344_bases
ATGGGAATTTGGTTGGTTATTTTGTTGTTCCTCTCCATATTCTTCATCATCATTTCGACAGTCAGATGGAAATTACATCC
TTTCCTGGCCCTGCTATTCGCTGCATTTGGATTCGGTTTGCTTTCAGGAATGAAGCTACCTGATATAATTTCTTCCATTA
CCGGGGGATTCGGAGGCACAGTAGGAGCAATAGGAATTGTCATCGTCGCCGGAACGATTATAGGAACCTTTCTTGAAAAA
TCCGGCGGTGCTTATACAATGGCCGAAAGCGTCCTGAAAGTAACCGGGAAAAAGAATGTCCCGCTTGCTATGGGCATCAT
AGGTTATATAGTCTCTATACCGGTCTTCTGCGACTCTGGCTTTGTTATTCTCAGTCCGCTGAATAAGGCACTCACAAAGC
GAGCCGGTATATCCCTTGCTGCCAGTGCGATTGCGCTCAGTCTAGGTCTCTACGCGACTCACACGATGGTTCCACCAACA
CCTGGACCGATAGCAGCAGCAGGAATACTTGGAGCGGATTTAGGAGTGGTAATACTCTGGGGACTTTTAGTATCAATTCC
AGCACTACTAGTAGGGTGGCTTTTTGCCGTGAGAGCAGGGAAAAGGATAAAGATCGATCCAGAACCCGAGCTTACAGAAG
AAAATATAGCTGCAAAAATGAAAGAGGCACCCAGCGCTTCTAAAGCTTTCCTTCCAATAGTTGTTCCCATAATTCTCATT
CTACTAAAATCCATTTCCGATTTTCCAACAAGACCTTTTGGCGATGGCGCCTTCAGGCAGTTAATCGGCTTTATCGGACA
TCCAGTAACCGCATTGATGATCGGTATACTCATTGCATTCACCCTGCCAAAAAAACTGGATAAAGAAATGCTTTCCACAT
CCGGTTGGGTAGGAGAAGCTCTGGTGAATGCCGCTATTATAATCATGATCACTGCTGCGGGCGGTGCCTTTGGTAAAGTT
CTCCAAAATTCTGGAATAGCTAAAGTCATAGGAGATACCCTTGCAAGAGCCAATCTTGGCATATGGCTGCCTTTCATAAT
CGCTGCCGGTATCAAGACGGCACAGGGATCTTCTACGGTTTCTATCATCACAACGGCATCGCTGATGGCACCACTTATGG
AACCTCTTGGATTTACCTCAACGGTAGCTAAAGCACTTGTCGTTGTAGCAATCGGTGCTGGTTCCATGGTTGTTTCACAC
GCTAACGATAGTTATTTCTGGGTTGTTACCCAGTTCTCACGTATGGATGTTAAACTTGGTTATAGGTTGCAAACCCTGGG
CACCCTGCTTGAAGGGTTGACGGCTGCGGTGCTGGTATGGATAATAAGCCTTGGAGTTTTATAA

Upstream 100 bases:

>100_bases
TTTAACTCATAGCTTTTGTTTTCTCATCCTCAAAATAGTCAGTAATTCTAACTATTTTATTCTAGAATATGAGAGTGATT
CTATATCAGGGGGTGAGATT

Downstream 100 bases:

>100_bases
TTGGAGGCGAAAAGCTTGTCAGATCTCAGAAATGACGCTTTAGATATCATTGATTATTCCATTAAGGCTGTTCTTCCTGA
CAACGCGGTAAAAGAAGCGA

Product: gluconate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MGIWLVILLFLSIFFIIISTVRWKLHPFLALLFAAFGFGLLSGMKLPDIISSITGGFGGTVGAIGIVIVAGTIIGTFLEK
SGGAYTMAESVLKVTGKKNVPLAMGIIGYIVSIPVFCDSGFVILSPLNKALTKRAGISLAASAIALSLGLYATHTMVPPT
PGPIAAAGILGADLGVVILWGLLVSIPALLVGWLFAVRAGKRIKIDPEPELTEENIAAKMKEAPSASKAFLPIVVPIILI
LLKSISDFPTRPFGDGAFRQLIGFIGHPVTALMIGILIAFTLPKKLDKEMLSTSGWVGEALVNAAIIIMITAAGGAFGKV
LQNSGIAKVIGDTLARANLGIWLPFIIAAGIKTAQGSSTVSIITTASLMAPLMEPLGFTSTVAKALVVVAIGAGSMVVSH
ANDSYFWVVTQFSRMDVKLGYRLQTLGTLLEGLTAAVLVWIISLGVL

Sequences:

>Translated_447_residues
MGIWLVILLFLSIFFIIISTVRWKLHPFLALLFAAFGFGLLSGMKLPDIISSITGGFGGTVGAIGIVIVAGTIIGTFLEK
SGGAYTMAESVLKVTGKKNVPLAMGIIGYIVSIPVFCDSGFVILSPLNKALTKRAGISLAASAIALSLGLYATHTMVPPT
PGPIAAAGILGADLGVVILWGLLVSIPALLVGWLFAVRAGKRIKIDPEPELTEENIAAKMKEAPSASKAFLPIVVPIILI
LLKSISDFPTRPFGDGAFRQLIGFIGHPVTALMIGILIAFTLPKKLDKEMLSTSGWVGEALVNAAIIIMITAAGGAFGKV
LQNSGIAKVIGDTLARANLGIWLPFIIAAGIKTAQGSSTVSIITTASLMAPLMEPLGFTSTVAKALVVVAIGAGSMVVSH
ANDSYFWVVTQFSRMDVKLGYRLQTLGTLLEGLTAAVLVWIISLGVL
>Mature_446_residues
GIWLVILLFLSIFFIIISTVRWKLHPFLALLFAAFGFGLLSGMKLPDIISSITGGFGGTVGAIGIVIVAGTIIGTFLEKS
GGAYTMAESVLKVTGKKNVPLAMGIIGYIVSIPVFCDSGFVILSPLNKALTKRAGISLAASAIALSLGLYATHTMVPPTP
GPIAAAGILGADLGVVILWGLLVSIPALLVGWLFAVRAGKRIKIDPEPELTEENIAAKMKEAPSASKAFLPIVVPIILIL
LKSISDFPTRPFGDGAFRQLIGFIGHPVTALMIGILIAFTLPKKLDKEMLSTSGWVGEALVNAAIIIMITAAGGAFGKVL
QNSGIAKVIGDTLARANLGIWLPFIIAAGIKTAQGSSTVSIITTASLMAPLMEPLGFTSTVAKALVVVAIGAGSMVVSHA
NDSYFWVVTQFSRMDVKLGYRLQTLGTLLEGLTAAVLVWIISLGVL

Specific function: Probable Permease For An Unknown Substrate. [C]

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1788707, Length=436, Percent_Identity=32.5688073394495, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI48994935, Length=414, Percent_Identity=30.9178743961353, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1789097, Length=457, Percent_Identity=31.5098468271335, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1790716, Length=417, Percent_Identity=31.6546762589928, Blast_Score=183, Evalue=2e-47,
Organism=Escherichia coli, GI1790776, Length=440, Percent_Identity=28.6363636363636, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI48994939, Length=411, Percent_Identity=30.4136253041363, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI2367370, Length=430, Percent_Identity=29.7674418604651, Blast_Score=155, Evalue=7e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 46619; Mature: 46487

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIWLVILLFLSIFFIIISTVRWKLHPFLALLFAAFGFGLLSGMKLPDIISSITGGFGGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHH
VGAIGIVIVAGTIIGTFLEKSGGAYTMAESVLKVTGKKNVPLAMGIIGYIVSIPVFCDSG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
FVILSPLNKALTKRAGISLAASAIALSLGLYATHTMVPPTPGPIAAAGILGADLGVVILW
EEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
GLLVSIPALLVGWLFAVRAGKRIKIDPEPELTEENIAAKMKEAPSASKAFLPIVVPIILI
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LLKSISDFPTRPFGDGAFRQLIGFIGHPVTALMIGILIAFTLPKKLDKEMLSTSGWVGEA
HHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHH
LVNAAIIIMITAAGGAFGKVLQNSGIAKVIGDTLARANLGIWLPFIIAAGIKTAQGSSTV
HHHHEEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCE
SIITTASLMAPLMEPLGFTSTVAKALVVVAIGAGSMVVSHANDSYFWVVTQFSRMDVKLG
EHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCEEEEECCCCEEEEEEECCCCCHHHC
YRLQTLGTLLEGLTAAVLVWIISLGVL
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GIWLVILLFLSIFFIIISTVRWKLHPFLALLFAAFGFGLLSGMKLPDIISSITGGFGGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHH
VGAIGIVIVAGTIIGTFLEKSGGAYTMAESVLKVTGKKNVPLAMGIIGYIVSIPVFCDSG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
FVILSPLNKALTKRAGISLAASAIALSLGLYATHTMVPPTPGPIAAAGILGADLGVVILW
EEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
GLLVSIPALLVGWLFAVRAGKRIKIDPEPELTEENIAAKMKEAPSASKAFLPIVVPIILI
HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LLKSISDFPTRPFGDGAFRQLIGFIGHPVTALMIGILIAFTLPKKLDKEMLSTSGWVGEA
HHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHH
LVNAAIIIMITAAGGAFGKVLQNSGIAKVIGDTLARANLGIWLPFIIAAGIKTAQGSSTV
HHHHEEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCE
SIITTASLMAPLMEPLGFTSTVAKALVVVAIGAGSMVVSHANDSYFWVVTQFSRMDVKLG
EHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCEEEEECCCCEEEEEEECCCCCHHHC
YRLQTLGTLLEGLTAAVLVWIISLGVL
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]