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The map label for this gene is 239618147

Identifier: 239618147

GI number: 239618147

Start: 1910021

End: 1910872

Strand: Reverse

Name: 239618147

Synonym: Kole_1780

Alternate gene names: NA

Gene position: 1910872-1910021 (Counterclockwise)

Preceding gene: 239618162

Following gene: 239618136

Centisome position: 83.0

GC content: 40.26

Gene sequence:

>852_bases
ATGAAAATCGGTATTGTGACTGATAGCACTTGCGGGCTTGAAAAAGATATATTAAAAAAACTCAAAGTAAGAGTTGTATC
CCTTTACATACAAAAAGGGGGAGAATATTACAAAGCAACTGAGATCGATAAGAAAACATACTACGAAGAACTGGAAAATG
CTAAAATTCTGCCAATGACCTCTCAACCCAGTCCACAAGATTTTTATGAGGTTTTCAGAGAGTTATCAACGGAATACGAT
GCGCTTATCGTACCTGTGATTTCAGCAAAGCTCAGCGGAACCTTTGATTCAGCTTCCATCGCGGCTTCTATGCTGGATAT
AAATATACGCATCGTCGATTCAAAACTGACAAATTACGCGCTGGGTTTCCTCGTAATGAATTTGAAGTCAATGATAGACC
AGGGAAAAAGTCTCGATGAGCTCGTTAAGTATGCCGAAGAATTCCATAAAAATATAAGATTGTATCTCTCCGTGGGTTCT
CTAAATTACCAGTACAAAGGTGGCCGAATAGGAAAAGCAAAGACTCTGATGGGAAACATATTGAACGTAAAACCGGTCAT
TGCAGTAGAAAATGGGGAACTCGTTCCAGTTGGTAGCGTCCGTGGAAACAAACGCTTACTTGCTGAATTGATTAAAAGAG
CCACCACTCCTATGGCAGGAAAAGAAATCAAGCGAATCGCTATTCTACATGTAAATAGAGAAGATGACGCAAAATACTTG
GAAGAAATATTAGCGGAAAGATTCAAAGGAGCCGAGATTTTCATAACCGAACCAGAGCCCGTTGTCGTAACACACCTTGG
ACCCTCTGCAATCGCGCTTATTACAGAATGGAGGGAGAAGGAAAGATATTAA

Upstream 100 bases:

>100_bases
TCCGAACAGCATTGACTGTATTGGCGTACGAAAATCGAACGATTATGTGCTAAATTCCTCTGGCACCCCATTGCAACATA
CCTTGTGGAGGTGATAGAAA

Downstream 100 bases:

>100_bases
GAATCGAGATCCGAGAATCCGAGAGGGCCGCTGTGCGACTGGTGAGCACGCTTCGCGTGGGTGAGCCCAGCTGCGCTGGG
GGTAAGCCTGACTACGTCAG

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKIGIVTDSTCGLEKDILKKLKVRVVSLYIQKGGEYYKATEIDKKTYYEELENAKILPMTSQPSPQDFYEVFRELSTEYD
ALIVPVISAKLSGTFDSASIAASMLDINIRIVDSKLTNYALGFLVMNLKSMIDQGKSLDELVKYAEEFHKNIRLYLSVGS
LNYQYKGGRIGKAKTLMGNILNVKPVIAVENGELVPVGSVRGNKRLLAELIKRATTPMAGKEIKRIAILHVNREDDAKYL
EEILAERFKGAEIFITEPEPVVVTHLGPSAIALITEWREKERY

Sequences:

>Translated_283_residues
MKIGIVTDSTCGLEKDILKKLKVRVVSLYIQKGGEYYKATEIDKKTYYEELENAKILPMTSQPSPQDFYEVFRELSTEYD
ALIVPVISAKLSGTFDSASIAASMLDINIRIVDSKLTNYALGFLVMNLKSMIDQGKSLDELVKYAEEFHKNIRLYLSVGS
LNYQYKGGRIGKAKTLMGNILNVKPVIAVENGELVPVGSVRGNKRLLAELIKRATTPMAGKEIKRIAILHVNREDDAKYL
EEILAERFKGAEIFITEPEPVVVTHLGPSAIALITEWREKERY
>Mature_283_residues
MKIGIVTDSTCGLEKDILKKLKVRVVSLYIQKGGEYYKATEIDKKTYYEELENAKILPMTSQPSPQDFYEVFRELSTEYD
ALIVPVISAKLSGTFDSASIAASMLDINIRIVDSKLTNYALGFLVMNLKSMIDQGKSLDELVKYAEEFHKNIRLYLSVGS
LNYQYKGGRIGKAKTLMGNILNVKPVIAVENGELVPVGSVRGNKRLLAELIKRATTPMAGKEIKRIAILHVNREDDAKYL
EEILAERFKGAEIFITEPEPVVVTHLGPSAIALITEWREKERY

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31811; Mature: 31811

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIVTDSTCGLEKDILKKLKVRVVSLYIQKGGEYYKATEIDKKTYYEELENAKILPMT
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCEEEEEC
SQPSPQDFYEVFRELSTEYDALIVPVISAKLSGTFDSASIAASMLDINIRIVDSKLTNYA
CCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCHHHHHHHEEEEEEEEEECHHHHHH
LGFLVMNLKSMIDQGKSLDELVKYAEEFHKNIRLYLSVGSLNYQYKGGRIGKAKTLMGNI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCCCHHHHHHHHH
LNVKPVIAVENGELVPVGSVRGNKRLLAELIKRATTPMAGKEIKRIAILHVNREDDAKYL
CCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHEEEEEEEEECCCCHHHHH
EEILAERFKGAEIFITEPEPVVVTHLGPSAIALITEWREKERY
HHHHHHHCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIGIVTDSTCGLEKDILKKLKVRVVSLYIQKGGEYYKATEIDKKTYYEELENAKILPMT
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCEEEEEC
SQPSPQDFYEVFRELSTEYDALIVPVISAKLSGTFDSASIAASMLDINIRIVDSKLTNYA
CCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCHHHHHHHEEEEEEEEEECHHHHHH
LGFLVMNLKSMIDQGKSLDELVKYAEEFHKNIRLYLSVGSLNYQYKGGRIGKAKTLMGNI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEECCEEEEECCCCCCHHHHHHHHH
LNVKPVIAVENGELVPVGSVRGNKRLLAELIKRATTPMAGKEIKRIAILHVNREDDAKYL
CCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHEEEEEEEEECCCCHHHHH
EEILAERFKGAEIFITEPEPVVVTHLGPSAIALITEWREKERY
HHHHHHHCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]