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The map label for this gene is tsf [H]

Identifier: 239618075

GI number: 239618075

Start: 1836781

End: 1837383

Strand: Reverse

Name: tsf [H]

Synonym: Kole_1707

Alternate gene names: 239618075

Gene position: 1837383-1836781 (Counterclockwise)

Preceding gene: 239618076

Following gene: 239618074

Centisome position: 79.81

GC content: 41.96

Gene sequence:

>603_bases
ATGGCAAAAATTACCGCTGACATGGTAAAAAAGCTGAGAGCCATGACCGGAGCCGGTATGCTTGACTGCAAGAAGGCTCT
TATGGAAAATGACGGTGATTTCGAGAAAGCAAAGGAATACCTGAGAAAGAAAGGTGCTATGAAAGCTGACAAAGTAGCAG
GAAGAGCTACCGGTGAAGGAATAATCTACTCTTACATCCACCACAACAGTAGAATCGGTGTCATGCTCGAGCTCAACTGT
AATACCGACTTCGTTGCGAGAACCAATGAGTTCAAGGAACTCGCCCACAAGATCTCTCTGCAGATCGCATCAATGGCTCC
ACGCTGGATTTCAAGAGAAGATGTACCAGCCGATGTCATTGAAAAGGAAAAGGAAATCTATCGTGAACAAATGAAGAATT
CCGGAAAACCCGAACACATAATCGACAAAATTATTGAAAACAAACTCGAATCCTTCTACCAGGAAAATTGTCTCATGGAG
CAGGAATATGTGTTTGAAAAAGGTAAAACAATCAAAGACCTGATTGTTGAAACCATCGCCAAAACTGGTGAAAATATAAA
GGTTAGCAGATTTGTTAGATGGGAAGTTGGGGAAAGCGATTAA

Upstream 100 bases:

>100_bases
GAAAAGAAAATTTTCAGGTTCAACTTAACGACTTTGAAATATTATTTTCTCAAGTTAAGATATAATCCATAAGGAGATGT
TAGAAAGGAGGAGACACAGA

Downstream 100 bases:

>100_bases
TAATGAAAGATAAAGAGGTGGGCATTGCTCACCTCTTTTTTTGGAGGGTGCTATGTACAGGAGAGTATTGTTAAAACTCA
GTGGTGAAGCCCTTAGTGGC

Product: translation elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MAKITADMVKKLRAMTGAGMLDCKKALMENDGDFEKAKEYLRKKGAMKADKVAGRATGEGIIYSYIHHNSRIGVMLELNC
NTDFVARTNEFKELAHKISLQIASMAPRWISREDVPADVIEKEKEIYREQMKNSGKPEHIIDKIIENKLESFYQENCLME
QEYVFEKGKTIKDLIVETIAKTGENIKVSRFVRWEVGESD

Sequences:

>Translated_200_residues
MAKITADMVKKLRAMTGAGMLDCKKALMENDGDFEKAKEYLRKKGAMKADKVAGRATGEGIIYSYIHHNSRIGVMLELNC
NTDFVARTNEFKELAHKISLQIASMAPRWISREDVPADVIEKEKEIYREQMKNSGKPEHIIDKIIENKLESFYQENCLME
QEYVFEKGKTIKDLIVETIAKTGENIKVSRFVRWEVGESD
>Mature_199_residues
AKITADMVKKLRAMTGAGMLDCKKALMENDGDFEKAKEYLRKKGAMKADKVAGRATGEGIIYSYIHHNSRIGVMLELNCN
TDFVARTNEFKELAHKISLQIASMAPRWISREDVPADVIEKEKEIYREQMKNSGKPEHIIDKIIENKLESFYQENCLMEQ
EYVFEKGKTIKDLIVETIAKTGENIKVSRFVRWEVGESD

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI291084498, Length=98, Percent_Identity=38.7755102040816, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI291084500, Length=98, Percent_Identity=38.7755102040816, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI291084502, Length=98, Percent_Identity=38.7755102040816, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI171846268, Length=98, Percent_Identity=38.7755102040816, Blast_Score=65, Evalue=3e-11,
Organism=Escherichia coli, GI1786366, Length=98, Percent_Identity=53.0612244897959, Blast_Score=101, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17561440, Length=202, Percent_Identity=28.2178217821782, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI19921466, Length=112, Percent_Identity=38.3928571428571, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 22914; Mature: 22783

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS01126 EF_TS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKITADMVKKLRAMTGAGMLDCKKALMENDGDFEKAKEYLRKKGAMKADKVAGRATGEG
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCC
IIYSYIHHNSRIGVMLELNCNTDFVARTNEFKELAHKISLQIASMAPRWISREDVPADVI
CEEHEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHH
EKEKEIYREQMKNSGKPEHIIDKIIENKLESFYQENCLMEQEYVFEKGKTIKDLIVETIA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHH
KTGENIKVSRFVRWEVGESD
HCCCCEEEEEEEEEECCCCC
>Mature Secondary Structure 
AKITADMVKKLRAMTGAGMLDCKKALMENDGDFEKAKEYLRKKGAMKADKVAGRATGEG
CCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCC
IIYSYIHHNSRIGVMLELNCNTDFVARTNEFKELAHKISLQIASMAPRWISREDVPADVI
CEEHEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHH
EKEKEIYREQMKNSGKPEHIIDKIIENKLESFYQENCLMEQEYVFEKGKTIKDLIVETIA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHH
KTGENIKVSRFVRWEVGESD
HCCCCEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA