Click here to switch to the map view.

The map label for this gene is 239618065

Identifier: 239618065

GI number: 239618065

Start: 1824548

End: 1825069

Strand: Reverse

Name: 239618065

Synonym: Kole_1695

Alternate gene names: NA

Gene position: 1825069-1824548 (Counterclockwise)

Preceding gene: 239618066

Following gene: 239618064

Centisome position: 79.28

GC content: 45.98

Gene sequence:

>522_bases
GTGAGTACCGCGAGATCGATATATGTTGAATGGGCCTGGCATGTAATCGAATCTTACATACTCAGGAATGAATATCCAGG
CATTTCTGGGAATTTGCCTGAAGAACTCACCCAAAGGCGAGCAGCTTGTTTTGTCACCCTTCACAAAGCAAATGGGGATT
TGCGAGGCTGTATAGGTACGATTTTACCAACAAAGCGAAACCTCGCCGAAGAGATAAGAGATAATGCCATTGCCGCCGCT
ACAAAAGACCCGCGGTTCCCACCAGTTCAGCCTGAAGAGCTGAACAATCTGGTGATATCCGTTGATATACTCAGCGAACC
CGAGGAGTGCAAACCCGAAGATCTTGACCCCAAAAAATACGGTGTCATTGTTGAAGCTGGATGGCGGCGAGGCGTATTAT
TGCCAGATTTACCGGGAATTGTCACTGTTCAGGAACAATTAAGGATTGCCCTGTTGAAAGCTGGAATTTCACCCAACGAA
CCTTATAAAATCTTCAGGTTTTCAGCTACTCGCTACTATTAA

Upstream 100 bases:

>100_bases
AATGCAATCGTTTCAATTCCTCTGGAATATGGGATAGCCACCAAAAAATTCGTTCCCTTCGAATACTACAAACTCGCGCA
GATATTCTTTGGATGAAGGG

Downstream 100 bases:

>100_bases
CCTGAACAAGAGGTGATCTCATGAAACCGGCTATTTATTTCGATGAGCTGGAAGGGGATGTTTTACAGTGTCATCTATGC
CCCAATAGATGTATTATAAG

Product: AMMECR1 domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MSTARSIYVEWAWHVIESYILRNEYPGISGNLPEELTQRRAACFVTLHKANGDLRGCIGTILPTKRNLAEEIRDNAIAAA
TKDPRFPPVQPEELNNLVISVDILSEPEECKPEDLDPKKYGVIVEAGWRRGVLLPDLPGIVTVQEQLRIALLKAGISPNE
PYKIFRFSATRYY

Sequences:

>Translated_173_residues
MSTARSIYVEWAWHVIESYILRNEYPGISGNLPEELTQRRAACFVTLHKANGDLRGCIGTILPTKRNLAEEIRDNAIAAA
TKDPRFPPVQPEELNNLVISVDILSEPEECKPEDLDPKKYGVIVEAGWRRGVLLPDLPGIVTVQEQLRIALLKAGISPNE
PYKIFRFSATRYY
>Mature_172_residues
STARSIYVEWAWHVIESYILRNEYPGISGNLPEELTQRRAACFVTLHKANGDLRGCIGTILPTKRNLAEEIRDNAIAAAT
KDPRFPPVQPEELNNLVISVDILSEPEECKPEDLDPKKYGVIVEAGWRRGVLLPDLPGIVTVQEQLRIALLKAGISPNEP
YKIFRFSATRYY

Specific function: Unknown

COG id: COG2078

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002733 [H]

Pfam domain/function: PF01871 AMMECR1 [H]

EC number: NA

Molecular weight: Translated: 19518; Mature: 19386

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTARSIYVEWAWHVIESYILRNEYPGISGNLPEELTQRRAACFVTLHKANGDLRGCIGT
CCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCHHHHHHH
ILPTKRNLAEEIRDNAIAAATKDPRFPPVQPEELNNLVISVDILSEPEECKPEDLDPKKY
HCCCHHHHHHHHHCCCEEECCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCCE
GVIVEAGWRRGVLLPDLPGIVTVQEQLRIALLKAGISPNEPYKIFRFSATRYY
EEEEECCCCCCEECCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure 
STARSIYVEWAWHVIESYILRNEYPGISGNLPEELTQRRAACFVTLHKANGDLRGCIGT
CCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCHHHHHHH
ILPTKRNLAEEIRDNAIAAATKDPRFPPVQPEELNNLVISVDILSEPEECKPEDLDPKKY
HCCCHHHHHHHHHCCCEEECCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCCE
GVIVEAGWRRGVLLPDLPGIVTVQEQLRIALLKAGISPNEPYKIFRFSATRYY
EEEEECCCCCCEECCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]