Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
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Accession | NC_012785 |
Length | 2,302,126 |
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The map label for this gene is fchA [H]
Identifier: 239618057
GI number: 239618057
Start: 1818464
End: 1819093
Strand: Reverse
Name: fchA [H]
Synonym: Kole_1686
Alternate gene names: 239618057
Gene position: 1819093-1818464 (Counterclockwise)
Preceding gene: 239618058
Following gene: 239618056
Centisome position: 79.02
GC content: 45.4
Gene sequence:
>630_bases ATGGATCTTTGCTCGTTAAGCGTTAAGGACTTCATAAAGCGAGTTGCCGAGAAATCACCGACTCCAGGTGGAGGCGCTGT TGGAGCTGTTGCGGCTGCTTTGGCCGCTGCACTTGGTGCTATGGTTTCGAACCTTACCATCGGCAAGAAAGGATACGAAG ACGTTGAGAGTCAGATGGAAGCATGTCTCGAAATCTTCGGCAACGAGATGAGCTACCTTTGTGATCTCGTAAATAAGGAC GTTCAAGCCTTCGATCAGGTAATGGCAGCTTACAGGCTTCCTAAAAATTCTGAAGAAGAAAAAGCCGTCAGAACAGTGAA GATCCAACAAGCTTTAAAAACTGCCATCGAAGTGCCCTTCGATCTTGCCAGACGTTGTAAAAATGTCATAGTGAACGTGG AAAGACTGGCAAAATGGGGCAATCTCAACGCTATTTCCGACGCTGAAAGTGCTGCACATTTGTTGTACGCAGTTTATTAT GTCGCAAAGGCCAACGTAATGATCAACATGAAGTCACTGAAAGATCCACGGTACTGTAACTGGATCAAAGAAGAAATGGA CCATCTCGAAAAGCAAATCGAAGCCTCCTACCGGAGGATACTCGAGGTGATAAAAAAGAGAAATGGTTAA
Upstream 100 bases:
>100_bases GAAGATATGATAAGGATGTTGATTGCGGGCGCCGACAGAATTGGAACGAGTTCTGGAATGAAAATAATAGGCAAAAAATA ATACAACAGGGGGGATTTGG
Downstream 100 bases:
>100_bases ATTCACCGTCACAAAAAAAGACCCGGTAACATCCGCGAGAACTGGAAAGCTAGAAACAAAACACGGTGTTTTCGAAACAC CTGTGTTTATGCCTGTGGGT
Product: Formimidoyltetrahydrofolate cyclodeaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MDLCSLSVKDFIKRVAEKSPTPGGGAVGAVAAALAAALGAMVSNLTIGKKGYEDVESQMEACLEIFGNEMSYLCDLVNKD VQAFDQVMAAYRLPKNSEEEKAVRTVKIQQALKTAIEVPFDLARRCKNVIVNVERLAKWGNLNAISDAESAAHLLYAVYY VAKANVMINMKSLKDPRYCNWIKEEMDHLEKQIEASYRRILEVIKKRNG
Sequences:
>Translated_209_residues MDLCSLSVKDFIKRVAEKSPTPGGGAVGAVAAALAAALGAMVSNLTIGKKGYEDVESQMEACLEIFGNEMSYLCDLVNKD VQAFDQVMAAYRLPKNSEEEKAVRTVKIQQALKTAIEVPFDLARRCKNVIVNVERLAKWGNLNAISDAESAAHLLYAVYY VAKANVMINMKSLKDPRYCNWIKEEMDHLEKQIEASYRRILEVIKKRNG >Mature_209_residues MDLCSLSVKDFIKRVAEKSPTPGGGAVGAVAAALAAALGAMVSNLTIGKKGYEDVESQMEACLEIFGNEMSYLCDLVNKD VQAFDQVMAAYRLPKNSEEEKAVRTVKIQQALKTAIEVPFDLARRCKNVIVNVERLAKWGNLNAISDAESAAHLLYAVYY VAKANVMINMKSLKDPRYCNWIKEEMDHLEKQIEASYRRILEVIKKRNG
Specific function: Required for both C1 and C2 metabolism [H]
COG id: COG3404
COG function: function code E; Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyclodeaminase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI46255035, Length=206, Percent_Identity=33.495145631068, Blast_Score=92, Evalue=3e-19, Organism=Homo sapiens, GI11140815, Length=206, Percent_Identity=33.495145631068, Blast_Score=92, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007044 [H]
Pfam domain/function: PF04961 FTCD_C [H]
EC number: =3.5.4.9 [H]
Molecular weight: Translated: 23221; Mature: 23221
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLCSLSVKDFIKRVAEKSPTPGGGAVGAVAAALAAALGAMVSNLTIGKKGYEDVESQME CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ACLEIFGNEMSYLCDLVNKDVQAFDQVMAAYRLPKNSEEEKAVRTVKIQQALKTAIEVPF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCH DLARRCKNVIVNVERLAKWGNLNAISDAESAAHLLYAVYYVAKANVMINMKSLKDPRYCN HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHH WIKEEMDHLEKQIEASYRRILEVIKKRNG HHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDLCSLSVKDFIKRVAEKSPTPGGGAVGAVAAALAAALGAMVSNLTIGKKGYEDVESQME CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ACLEIFGNEMSYLCDLVNKDVQAFDQVMAAYRLPKNSEEEKAVRTVKIQQALKTAIEVPF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCH DLARRCKNVIVNVERLAKWGNLNAISDAESAAHLLYAVYYVAKANVMINMKSLKDPRYCN HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHH WIKEEMDHLEKQIEASYRRILEVIKKRNG HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7961516; 10215859 [H]