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The map label for this gene is smf [H]

Identifier: 239618024

GI number: 239618024

Start: 1781182

End: 1782213

Strand: Reverse

Name: smf [H]

Synonym: Kole_1653

Alternate gene names: 239618024

Gene position: 1782213-1781182 (Counterclockwise)

Preceding gene: 239618025

Following gene: 239618023

Centisome position: 77.42

GC content: 41.96

Gene sequence:

>1032_bases
ATGAATAGGTTAGAATACGCGATACTGGCTTTAGCGGGAGATCTAACTGTTGATGATCTCTCGATTTTGCAATCACATAA
TATCGGGTTAAAAGAACTCACAACCAGCCGTATAGAACTATTGAACGAGCGAAAGCAGAAGCAAATAATCTCAAAATGCC
GAAGCGTCGAAAAAAAACTCAAAGAATTCAGAAATTTCATAACCTTTCAGGACCAACAATACCCTGAAAAACTGAAAGCC
AGTCTTTTTCCACCTCCAGTTCTTTTTTATGAAGGAAACCCGGATATACTCAATGAAGAAAATTCGCTGGCTATTGTTGG
TTCTCGCAAGGCCACACAATACGGATTGAAACTGGCTGAAAGTTTTTCGCGTGAATTGGATAATGCCGGACTTTGCATAA
TCAGCGGTCTGGCTGTGGGGATAGACGGAGCAGCACACCGCGGAAGCCTGCAATCAACTGGAAAGACCGTGGCAGTCCTC
GGCTCTGGAATAGACATCGTTTATCCAAAAAGCAATCGTAAACTATTCTCTTTCATAACTGAACATGGCTGTATAGTAAG
CGAGTTCCTTCCTGGTACTCCTCCAATGAAATACAATTTTCCAAGGAGGAACAGAATCATTGTTGGCTTATCGAAAGCCG
TTCTCGTCGTGGAAGCTACAAAGAGGAGTGGTTCACTTATCACTGCCAGACTAGCTCTGGATAATGGACGTGATGTCTTT
GCTATTCCCGGAGATATAAACAAACGAAGTTCAGAAGGGACGAACTGGTTAATCCAGAATGGCGCCAAACTAATCTTATC
GATTGAAGACATATTGGAAGAATTTCCTACTGTTTCTAGAAGTTCATCCAAGGACATTCAAATAAAGTCATCGGTCTTAA
AAGTACTCTCCGAATTTGGTGAACTTGAATTTTCAGAGCTTCTAGAACACACCAAACTTGAACACACTGAACTCCTACTG
GAACTCACACGGTTGCAGCTCGAAGGACTTGTTACTGAAAGTACCGGAAAATGGAGAGCAAACATTGTATGA

Upstream 100 bases:

>100_bases
CGTTTCTGAACCAAAGGTTATTATCACCGAAGATTACGTAAACACGAGAATAAAAGAAATCCTGGCCGATGAGGATTTGA
GCGCATTTATCCTGTGAGCT

Downstream 100 bases:

>100_bases
AAACATCGGTTACACGTGTAAGCATATTCTGACATAAATATTGAGATGTTATAATCATAACCGAAGGAGGGGATATTATG
CCGTATGTCAACACAAAAGA

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MNRLEYAILALAGDLTVDDLSILQSHNIGLKELTTSRIELLNERKQKQIISKCRSVEKKLKEFRNFITFQDQQYPEKLKA
SLFPPPVLFYEGNPDILNEENSLAIVGSRKATQYGLKLAESFSRELDNAGLCIISGLAVGIDGAAHRGSLQSTGKTVAVL
GSGIDIVYPKSNRKLFSFITEHGCIVSEFLPGTPPMKYNFPRRNRIIVGLSKAVLVVEATKRSGSLITARLALDNGRDVF
AIPGDINKRSSEGTNWLIQNGAKLILSIEDILEEFPTVSRSSSKDIQIKSSVLKVLSEFGELEFSELLEHTKLEHTELLL
ELTRLQLEGLVTESTGKWRANIV

Sequences:

>Translated_343_residues
MNRLEYAILALAGDLTVDDLSILQSHNIGLKELTTSRIELLNERKQKQIISKCRSVEKKLKEFRNFITFQDQQYPEKLKA
SLFPPPVLFYEGNPDILNEENSLAIVGSRKATQYGLKLAESFSRELDNAGLCIISGLAVGIDGAAHRGSLQSTGKTVAVL
GSGIDIVYPKSNRKLFSFITEHGCIVSEFLPGTPPMKYNFPRRNRIIVGLSKAVLVVEATKRSGSLITARLALDNGRDVF
AIPGDINKRSSEGTNWLIQNGAKLILSIEDILEEFPTVSRSSSKDIQIKSSVLKVLSEFGELEFSELLEHTKLEHTELLL
ELTRLQLEGLVTESTGKWRANIV
>Mature_343_residues
MNRLEYAILALAGDLTVDDLSILQSHNIGLKELTTSRIELLNERKQKQIISKCRSVEKKLKEFRNFITFQDQQYPEKLKA
SLFPPPVLFYEGNPDILNEENSLAIVGSRKATQYGLKLAESFSRELDNAGLCIISGLAVGIDGAAHRGSLQSTGKTVAVL
GSGIDIVYPKSNRKLFSFITEHGCIVSEFLPGTPPMKYNFPRRNRIIVGLSKAVLVVEATKRSGSLITARLALDNGRDVF
AIPGDINKRSSEGTNWLIQNGAKLILSIEDILEEFPTVSRSSSKDIQIKSSVLKVLSEFGELEFSELLEHTKLEHTELLL
ELTRLQLEGLVTESTGKWRANIV

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=239, Percent_Identity=45.6066945606695, Blast_Score=192, Evalue=4e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 38069; Mature: 38069

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLEYAILALAGDLTVDDLSILQSHNIGLKELTTSRIELLNERKQKQIISKCRSVEKKL
CCCHHEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEFRNFITFQDQQYPEKLKASLFPPPVLFYEGNPDILNEENSLAIVGSRKATQYGLKLAE
HHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHH
SFSRELDNAGLCIISGLAVGIDGAAHRGSLQSTGKTVAVLGSGIDIVYPKSNRKLFSFIT
HHHHHCCCCCEEEEEEEEECCCCCCCCCCCHHCCCEEEEEECCEEEEEECCCCHHHHHHH
EHGCIVSEFLPGTPPMKYNFPRRNRIIVGLSKAVLVVEATKRSGSLITARLALDNGRDVF
HCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCEEEEEEEECCCCEEE
AIPGDINKRSSEGTNWLIQNGAKLILSIEDILEEFPTVSRSSSKDIQIKSSVLKVLSEFG
EECCCCCCCCCCCCCEEEECCCEEEEEHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHC
ELEFSELLEHTKLEHTELLLELTRLQLEGLVTESTGKWRANIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCC
>Mature Secondary Structure
MNRLEYAILALAGDLTVDDLSILQSHNIGLKELTTSRIELLNERKQKQIISKCRSVEKKL
CCCHHEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEFRNFITFQDQQYPEKLKASLFPPPVLFYEGNPDILNEENSLAIVGSRKATQYGLKLAE
HHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHH
SFSRELDNAGLCIISGLAVGIDGAAHRGSLQSTGKTVAVLGSGIDIVYPKSNRKLFSFIT
HHHHHCCCCCEEEEEEEEECCCCCCCCCCCHHCCCEEEEEECCEEEEEECCCCHHHHHHH
EHGCIVSEFLPGTPPMKYNFPRRNRIIVGLSKAVLVVEATKRSGSLITARLALDNGRDVF
HCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCEEEEEEEECCCCEEE
AIPGDINKRSSEGTNWLIQNGAKLILSIEDILEEFPTVSRSSSKDIQIKSSVLKVLSEFG
EECCCCCCCCCCCCCEEEECCCEEEEEHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHC
ELEFSELLEHTKLEHTELLLELTRLQLEGLVTESTGKWRANIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]