| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is fur [H]
Identifier: 239617900
GI number: 239617900
Start: 1640580
End: 1641026
Strand: Reverse
Name: fur [H]
Synonym: Kole_1528
Alternate gene names: 239617900
Gene position: 1641026-1640580 (Counterclockwise)
Preceding gene: 239617901
Following gene: 239617897
Centisome position: 71.28
GC content: 42.95
Gene sequence:
>447_bases GTGAAGCAAGACATTCTTAGAAGTGAGTTGCGCAAGAGAAAACAAAGAATGACCGCCCAAAGAGAGTTGATATTGAAAGC TTTCATGGAATCCGGAGAAGAACATATGAGCGCCGAGGAAGTCTACAGAAAGGTGCTTGAAAGAAGGCTTCGAATAAGTA AGGCTACGGTTTACAGAACGGTGGAACTTTTAACGGAGGTAGGCCTTCTCAGAAAAATCGTTTTTCGTGATGGTGTGGTT CGTTACGAGCTCGTCGATAAAGGTGAACATCATCACCACCACCTGGTATGTAACAGCTGCGGTAAGGTTATCGAATTTCC GGAAGATCTTCTCGATGGTCTTGAGAATCTCATAGAGGAAAAAACCGGTTTCAAAATAACCGACCACCAACTTAAGTTTT ACGGGCTTTGCTCTGAATGCCAGAAGAGTATTGCAAACAAAGAATAA
Upstream 100 bases:
>100_bases GATATTTTGTAACATATTACCTACTCTCTGTAAATGAACTCATGTAAAATGAATCTGATGATCCTTATTCACCAACAGTT TTGGCAGGGAGGTTTTGAAA
Downstream 100 bases:
>100_bases GAGACTAACAACGCCACAAAATAAGACCACGGAAAAGGTACAGTTACTATCAGTCCAAGCTCTGAAATTTTGTGAAGCCC TTTTTCAAAAAACAAAGACA
Product: ferric uptake regulator, Fur family
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKQDILRSELRKRKQRMTAQRELILKAFMESGEEHMSAEEVYRKVLERRLRISKATVYRTVELLTEVGLLRKIVFRDGVV RYELVDKGEHHHHHLVCNSCGKVIEFPEDLLDGLENLIEEKTGFKITDHQLKFYGLCSECQKSIANKE
Sequences:
>Translated_148_residues MKQDILRSELRKRKQRMTAQRELILKAFMESGEEHMSAEEVYRKVLERRLRISKATVYRTVELLTEVGLLRKIVFRDGVV RYELVDKGEHHHHHLVCNSCGKVIEFPEDLLDGLENLIEEKTGFKITDHQLKFYGLCSECQKSIANKE >Mature_148_residues MKQDILRSELRKRKQRMTAQRELILKAFMESGEEHMSAEEVYRKVLERRLRISKATVYRTVELLTEVGLLRKIVFRDGVV RYELVDKGEHHHHHLVCNSCGKVIEFPEDLLDGLENLIEEKTGFKITDHQLKFYGLCSECQKSIANKE
Specific function: Iron uptake repressor. Acts on the transcription of ferri-siderophore uptake genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=133, Percent_Identity=35.3383458646617, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17413; Mature: 17413
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQDILRSELRKRKQRMTAQRELILKAFMESGEEHMSAEEVYRKVLERRLRISKATVYRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH VELLTEVGLLRKIVFRDGVVRYELVDKGEHHHHHLVCNSCGKVIEFPEDLLDGLENLIEE HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH KTGFKITDHQLKFYGLCSECQKSIANKE HCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKQDILRSELRKRKQRMTAQRELILKAFMESGEEHMSAEEVYRKVLERRLRISKATVYRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH VELLTEVGLLRKIVFRDGVVRYELVDKGEHHHHHLVCNSCGKVIEFPEDLLDGLENLIEE HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH KTGFKITDHQLKFYGLCSECQKSIANKE HCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9701813 [H]