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The map label for this gene is yjbQ [C]

Identifier: 239617892

GI number: 239617892

Start: 1632991

End: 1633410

Strand: Reverse

Name: yjbQ [C]

Synonym: Kole_1520

Alternate gene names: 239617892

Gene position: 1633410-1632991 (Counterclockwise)

Preceding gene: 239617893

Following gene: 239617891

Centisome position: 70.95

GC content: 43.57

Gene sequence:

>420_bases
ATGACTATGGTGAAGAGCAAAGTTTATACGATAAGAACACCTGAAAGGGAATGTTTTGTGGAGATTACTCAATATCTCCA
GGAATACCTCCATGAAATAGATATAACAAACGGGGTGCTTCTCGTCTTCATACCCCATACTACTGCTGGCGTTACAATAA
ATGAACACGCCGATCCGTCGGTGGTAAGAGATATCCTTACTTACCTCAAAAAACTCGTTCCTTATCGAGGAAATTACAAA
CATCTGGAAGGTAATTCTGATGCTCATATAAAAGCAAGCCTTGTTGGGGCTTCTCTTTCTATACCCTTTGAATCCAAAAA
ACTGCTCCTTGGCACCTGGCAGGGCGTTTTCTTCTGCGAATTTGATGGTCCCAGGACGAGACGTTTCATCGTTACAGCCA
CCCCCTGCGACCCAAAGTAG

Upstream 100 bases:

>100_bases
ATGTCGCCGAAAGATTCAAGGTTAAAGAAGAGAATGTAAAGGTTCAGCTCGAAGAACACAACGGGTATGTTGTTATAATT
ACCAACGTTGTTTTCCATTG

Downstream 100 bases:

>100_bases
GCACTGCAAATCTCATAACCCTAAACTGTCGGGGGTGATTTGATGAAAAAAGGGGAAAAGCTATTTTATTTGCTCTTCAT
CGCGGGATCTTCACTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTMVKSKVYTIRTPERECFVEITQYLQEYLHEIDITNGVLLVFIPHTTAGVTINEHADPSVVRDILTYLKKLVPYRGNYK
HLEGNSDAHIKASLVGASLSIPFESKKLLLGTWQGVFFCEFDGPRTRRFIVTATPCDPK

Sequences:

>Translated_139_residues
MTMVKSKVYTIRTPERECFVEITQYLQEYLHEIDITNGVLLVFIPHTTAGVTINEHADPSVVRDILTYLKKLVPYRGNYK
HLEGNSDAHIKASLVGASLSIPFESKKLLLGTWQGVFFCEFDGPRTRRFIVTATPCDPK
>Mature_138_residues
TMVKSKVYTIRTPERECFVEITQYLQEYLHEIDITNGVLLVFIPHTTAGVTINEHADPSVVRDILTYLKKLVPYRGNYKH
LEGNSDAHIKASLVGASLSIPFESKKLLLGTWQGVFFCEFDGPRTRRFIVTATPCDPK

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=134, Percent_Identity=32.8358208955224, Blast_Score=77, Evalue=6e-16,
Organism=Drosophila melanogaster, GI221476589, Length=120, Percent_Identity=40.8333333333333, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI221476594, Length=120, Percent_Identity=40.8333333333333, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15787; Mature: 15656

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMVKSKVYTIRTPERECFVEITQYLQEYLHEIDITNGVLLVFIPHTTAGVTINEHADPS
CCEECCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCHH
VVRDILTYLKKLVPYRGNYKHLEGNSDAHIKASLVGASLSIPFESKKLLLGTWQGVFFCE
HHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCCCEEEEEECCEEEEEE
FDGPRTRRFIVTATPCDPK
ECCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
TMVKSKVYTIRTPERECFVEITQYLQEYLHEIDITNGVLLVFIPHTTAGVTINEHADPS
CEECCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCHH
VVRDILTYLKKLVPYRGNYKHLEGNSDAHIKASLVGASLSIPFESKKLLLGTWQGVFFCE
HHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCCCEEEEEECCEEEEEE
FDGPRTRRFIVTATPCDPK
ECCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]