| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617891
Identifier: 239617891
GI number: 239617891
Start: 1630138
End: 1632948
Strand: Reverse
Name: 239617891
Synonym: Kole_1519
Alternate gene names: NA
Gene position: 1632948-1630138 (Counterclockwise)
Preceding gene: 239617892
Following gene: 239617885
Centisome position: 70.93
GC content: 41.41
Gene sequence:
>2811_bases ATGAAAAAAGGGGAAAAGCTATTTTATTTGCTCTTCATCGCGGGATCTTCACTTTTTGCTGTTAAAGGCATAACCTGGGA TATGGCTCTTCCAAAGTTTTTCTATGCCTCGGTATTCTTAGCCGCCCTCTTCGTCGCAAAAGGAATGCGGCTCTCTAAGC AACCTCAAAGTATTTCCTTATCTATTCCCCATTTTTTTGCGGTCGTGTATGCTGTTTATGGGATTCTATCGAGTTTTTTG CTTTTAAGGACCATTCCAGAAGCTTTTGCAACCTCTCTGGGTTTTTCACTGAGTCTCCTGGTCCTTATCCTGTTTTCAAT ACATATCTCTGAAAAATCCGTTAATGGTATTTTGTGGCTGCTTCAGATATTCGTGCTTTTTGGTGTTATCATAGCTGTTG ATGCCCTTTTGGGTTTTTACACCGGCAACTCGATTTTCTGGGGCATATTGGGCCAACCGCTGATGCGCGGGAATATCTCT TCAGTGGTTGGAAACGTCAACTTCACCACTGACCTTATGGGAATGCTGCTGCCAATCGTCTTGTATCTGGCGATAATAAC ACGAAGACTCTGGAGAAACGAACGAGCGAGAGTACTTTTTTATACCATCACCTATGCATTATTTCTGAGCGTTGTGCTGG CCGGACAAACCAGGGGTGTTTACTATTCGCTCATCGGTGCCTTTCTGGTGGTTCTTCTAGGGGTACTCGCCGGAATGCAA AAAAAAGTAAAGCCGAAGATAAGGCCCCTTTCACTGGTTGTGCTTTTGGTTATCACTATTTTCCTTATTTATGGCTATTC GACCGATTCGATATTTACACGTGGCACTTTTAGTATCTCCGAAAGGCTCTCATCTAGCGCAAATAAAAGCGCTGCGGATT TTCGAACATTTTTATGGAAAACAGCCATAAAACAATGGGAGAATTCAAAGATTCTGGGCACGGGGTTCGGGAGCTACAAG TATTTCTCTTCAGAGAACATGGGAAGAGTGCTCAACGAAGAACCCCGATATATGTACATCGCCGGATTAAACAGTATCAG GGCACACGGAGAATATTTTCAGCAACTGGCAGAAACCGGATTGATCGGCCTTTCTCTTGTTCTACTTGCACTTGGTTCAC TGGTACTTTATTACTTCAGAATCATCTTTCGTTTGAAGGATTTTGACCTCCTCTTACTCTTTTCCGTACTCGCTGGTTCT TTCAGCGTAATCGTTTTGCACAGCGTGGTATCCTTTCCGGCTCACTTTATGCCGAACGCTTTGCTGGCTGTGACGGTTGC TGGAGCAGCGCTATCACCGGTATTTAGGTCTAACAGTTTTCAACTGAAAAAGATTTCTATCAACAGATGGACGGGAATGC TAATGATCGTCATCTCCCTGATAGCGGCTGTTCTGATGTCACGCAACTACCTCACAGAAGCCTTCTTCACCAGAGGTTAC ATAGGATATAAAACCTACATATCTGCCACTGCCCAAATTCCTGATCTCAGGAACTCAGTTGTAAAGATAAAAAGAGATTT AAACAGTCTCGAAAACTTTGATGGGGAATTCAGCTATCTCGCAACGGATACCTACATTAATCAAAAACTCGATTCACTCA AAGAAACGTACCCCAAAGCTCCTGATACCCTGTTATATCTCATAGCTACCGAAAGCCACAAAAGTGAATTCTCAACCAAA CAAAATAGGATAAAAGACAAGCTCAAAACCGCCGCAGACACTTTGATGATGGCTCAACACGCAGCAATCAGAGGATATTA TAGCGGGATCTCCAACCTGGATTCCTCTCTGTTCTTCTCCAGAGGATTCAACCTATCAGCTGCCTTCATGGGTGATTTCC TCAAAACCTCAGATAGAACAGAGGATTTCGTACTGAGATTGATGAACTCACCACGCGAAGCTCAACTAAAACTGATAGAG GACGCTTTTACAGGCAAAGATTTGAATACAGAATATTTGACTGGATACAAAAAACCAAGAGAAATTGTTCAACCTTTGCT TAAAAGATCCCAGAGACATCTTTTCCTCGAAGAATTCCCGATTCTCTTTAACAAAGCTTTAACCCGGGCTGATCTATCCC GATTACTTAACGAGATCAATTTCAGCATTTTGTATTCTTTCCAGGCAAAGTGGGACGCTATCGATTACTACATACTATCA ATGCAGCTTGGACCTGATGCCCAGGTGATGCGAAATACCGCCAGAACATATTTTGACGCTTTCACTCAGGCAAAAGATGT CACCGCCGAACTGAAAAAACTGATACCTTACCTGAATAAAGAAGACAGGAAAAAGCTTTACGAACTGATCGAGAGGATCA AAAACCTTCCTTTGAAATTACGTGATGAATTTGAATACATCTATGATAGGACTATCTCACTTATTCCCGGTGCATGGAGA TATTTTAATAACTGGGAATACATTTACAGTGATTATGCGAGAGAACTAGTTCTACTCTATGGACCCAAAGACTCTTTAGA TAAGATCCTCAAAATTGTAGAAAAAGAACTCTACGTTTGTAGATATATGAAGGAAACTCGTTGGAGTATTCCTGATAACA CGTTCGATCTTTTACTTATACTATCTCAGGAAATGAAAGGAAACGAAGCGTTAAGACTAAAAAGAAAGATACTCTCACTT TATGAAGAAGCATACCAATGGAACCGAGAACAGCTTAAAAACTTCCGCAAAGAAAGGATTGAGAAAATTCCAGAAAATAA TCCTAATCGTCAGAAATATGAACAGATCTACTCGAGGATGAAAGACTTCGTCAATAGATACGAAATACTCAAAAAAAGCG TGGAAGATTAA
Upstream 100 bases:
>100_bases TGATGGTCCCAGGACGAGACGTTTCATCGTTACAGCCACCCCCTGCGACCCAAAGTAGGCACTGCAAATCTCATAACCCT AAACTGTCGGGGGTGATTTG
Downstream 100 bases:
>100_bases TCAACAAAAAAAGGGGCCTTCCAAGCCCCCTCATTTCTCTAAAAGAGTATTTTCCCTCCACCATCAGGATCTTTCGGTCC TTTTGGCTTAAGCTTTTTGA
Product: O-antigen polymerase
Products: NA
Alternate protein names: O-Antigen Polymerase Family
Number of amino acids: Translated: 936; Mature: 936
Protein sequence:
>936_residues MKKGEKLFYLLFIAGSSLFAVKGITWDMALPKFFYASVFLAALFVAKGMRLSKQPQSISLSIPHFFAVVYAVYGILSSFL LLRTIPEAFATSLGFSLSLLVLILFSIHISEKSVNGILWLLQIFVLFGVIIAVDALLGFYTGNSIFWGILGQPLMRGNIS SVVGNVNFTTDLMGMLLPIVLYLAIITRRLWRNERARVLFYTITYALFLSVVLAGQTRGVYYSLIGAFLVVLLGVLAGMQ KKVKPKIRPLSLVVLLVITIFLIYGYSTDSIFTRGTFSISERLSSSANKSAADFRTFLWKTAIKQWENSKILGTGFGSYK YFSSENMGRVLNEEPRYMYIAGLNSIRAHGEYFQQLAETGLIGLSLVLLALGSLVLYYFRIIFRLKDFDLLLLFSVLAGS FSVIVLHSVVSFPAHFMPNALLAVTVAGAALSPVFRSNSFQLKKISINRWTGMLMIVISLIAAVLMSRNYLTEAFFTRGY IGYKTYISATAQIPDLRNSVVKIKRDLNSLENFDGEFSYLATDTYINQKLDSLKETYPKAPDTLLYLIATESHKSEFSTK QNRIKDKLKTAADTLMMAQHAAIRGYYSGISNLDSSLFFSRGFNLSAAFMGDFLKTSDRTEDFVLRLMNSPREAQLKLIE DAFTGKDLNTEYLTGYKKPREIVQPLLKRSQRHLFLEEFPILFNKALTRADLSRLLNEINFSILYSFQAKWDAIDYYILS MQLGPDAQVMRNTARTYFDAFTQAKDVTAELKKLIPYLNKEDRKKLYELIERIKNLPLKLRDEFEYIYDRTISLIPGAWR YFNNWEYIYSDYARELVLLYGPKDSLDKILKIVEKELYVCRYMKETRWSIPDNTFDLLLILSQEMKGNEALRLKRKILSL YEEAYQWNREQLKNFRKERIEKIPENNPNRQKYEQIYSRMKDFVNRYEILKKSVED
Sequences:
>Translated_936_residues MKKGEKLFYLLFIAGSSLFAVKGITWDMALPKFFYASVFLAALFVAKGMRLSKQPQSISLSIPHFFAVVYAVYGILSSFL LLRTIPEAFATSLGFSLSLLVLILFSIHISEKSVNGILWLLQIFVLFGVIIAVDALLGFYTGNSIFWGILGQPLMRGNIS SVVGNVNFTTDLMGMLLPIVLYLAIITRRLWRNERARVLFYTITYALFLSVVLAGQTRGVYYSLIGAFLVVLLGVLAGMQ KKVKPKIRPLSLVVLLVITIFLIYGYSTDSIFTRGTFSISERLSSSANKSAADFRTFLWKTAIKQWENSKILGTGFGSYK YFSSENMGRVLNEEPRYMYIAGLNSIRAHGEYFQQLAETGLIGLSLVLLALGSLVLYYFRIIFRLKDFDLLLLFSVLAGS FSVIVLHSVVSFPAHFMPNALLAVTVAGAALSPVFRSNSFQLKKISINRWTGMLMIVISLIAAVLMSRNYLTEAFFTRGY IGYKTYISATAQIPDLRNSVVKIKRDLNSLENFDGEFSYLATDTYINQKLDSLKETYPKAPDTLLYLIATESHKSEFSTK QNRIKDKLKTAADTLMMAQHAAIRGYYSGISNLDSSLFFSRGFNLSAAFMGDFLKTSDRTEDFVLRLMNSPREAQLKLIE DAFTGKDLNTEYLTGYKKPREIVQPLLKRSQRHLFLEEFPILFNKALTRADLSRLLNEINFSILYSFQAKWDAIDYYILS MQLGPDAQVMRNTARTYFDAFTQAKDVTAELKKLIPYLNKEDRKKLYELIERIKNLPLKLRDEFEYIYDRTISLIPGAWR YFNNWEYIYSDYARELVLLYGPKDSLDKILKIVEKELYVCRYMKETRWSIPDNTFDLLLILSQEMKGNEALRLKRKILSL YEEAYQWNREQLKNFRKERIEKIPENNPNRQKYEQIYSRMKDFVNRYEILKKSVED >Mature_936_residues MKKGEKLFYLLFIAGSSLFAVKGITWDMALPKFFYASVFLAALFVAKGMRLSKQPQSISLSIPHFFAVVYAVYGILSSFL LLRTIPEAFATSLGFSLSLLVLILFSIHISEKSVNGILWLLQIFVLFGVIIAVDALLGFYTGNSIFWGILGQPLMRGNIS SVVGNVNFTTDLMGMLLPIVLYLAIITRRLWRNERARVLFYTITYALFLSVVLAGQTRGVYYSLIGAFLVVLLGVLAGMQ KKVKPKIRPLSLVVLLVITIFLIYGYSTDSIFTRGTFSISERLSSSANKSAADFRTFLWKTAIKQWENSKILGTGFGSYK YFSSENMGRVLNEEPRYMYIAGLNSIRAHGEYFQQLAETGLIGLSLVLLALGSLVLYYFRIIFRLKDFDLLLLFSVLAGS FSVIVLHSVVSFPAHFMPNALLAVTVAGAALSPVFRSNSFQLKKISINRWTGMLMIVISLIAAVLMSRNYLTEAFFTRGY IGYKTYISATAQIPDLRNSVVKIKRDLNSLENFDGEFSYLATDTYINQKLDSLKETYPKAPDTLLYLIATESHKSEFSTK QNRIKDKLKTAADTLMMAQHAAIRGYYSGISNLDSSLFFSRGFNLSAAFMGDFLKTSDRTEDFVLRLMNSPREAQLKLIE DAFTGKDLNTEYLTGYKKPREIVQPLLKRSQRHLFLEEFPILFNKALTRADLSRLLNEINFSILYSFQAKWDAIDYYILS MQLGPDAQVMRNTARTYFDAFTQAKDVTAELKKLIPYLNKEDRKKLYELIERIKNLPLKLRDEFEYIYDRTISLIPGAWR YFNNWEYIYSDYARELVLLYGPKDSLDKILKIVEKELYVCRYMKETRWSIPDNTFDLLLILSQEMKGNEALRLKRKILSL YEEAYQWNREQLKNFRKERIEKIPENNPNRQKYEQIYSRMKDFVNRYEILKKSVED
Specific function: Unknown
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107522; Mature: 107522
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGEKLFYLLFIAGSSLFAVKGITWDMALPKFFYASVFLAALFVAKGMRLSKQPQSISL CCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE SIPHFFAVVYAVYGILSSFLLLRTIPEAFATSLGFSLSLLVLILFSIHISEKSVNGILWL EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHH LQIFVLFGVIIAVDALLGFYTGNSIFWGILGQPLMRGNISSVVGNVNFTTDLMGMLLPIV HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCHHHCCCHHHHHCCCCHHHHHHHHHHHHH LYLAIITRRLWRNERARVLFYTITYALFLSVVLAGQTRGVYYSLIGAFLVVLLGVLAGMQ HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH KKVKPKIRPLSLVVLLVITIFLIYGYSTDSIFTRGTFSISERLSSSANKSAADFRTFLWK HHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHCCCCCHHHHHHHHHHH TAIKQWENSKILGTGFGSYKYFSSENMGRVLNEEPRYMYIAGLNSIRAHGEYFQQLAETG HHHHHCCCCCEEECCCCCCCEECCCCCCHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCC LIGLSLVLLALGSLVLYYFRIIFRLKDFDLLLLFSVLAGSFSVIVLHSVVSFPAHFMPNA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCH LLAVTVAGAALSPVFRSNSFQLKKISINRWTGMLMIVISLIAAVLMSRNYLTEAFFTRGY HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC IGYKTYISATAQIPDLRNSVVKIKRDLNSLENFDGEFSYLATDTYINQKLDSLKETYPKA CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCC PDTLLYLIATESHKSEFSTKQNRIKDKLKTAADTLMMAQHAAIRGYYSGISNLDSSLFFS CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH RGFNLSAAFMGDFLKTSDRTEDFVLRLMNSPREAQLKLIEDAFTGKDLNTEYLTGYKKPR CCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCH EIVQPLLKRSQRHLFLEEFPILFNKALTRADLSRLLNEINFSILYSFQAKWDAIDYYILS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCEEEEEEE MQLGPDAQVMRNTARTYFDAFTQAKDVTAELKKLIPYLNKEDRKKLYELIERIKNLPLKL EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH RDEFEYIYDRTISLIPGAWRYFNNWEYIYSDYARELVLLYGPKDSLDKILKIVEKELYVC HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHH RYMKETRWSIPDNTFDLLLILSQEMKGNEALRLKRKILSLYEEAYQWNREQLKNFRKERI HHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH EKIPENNPNRQKYEQIYSRMKDFVNRYEILKKSVED HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKGEKLFYLLFIAGSSLFAVKGITWDMALPKFFYASVFLAALFVAKGMRLSKQPQSISL CCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE SIPHFFAVVYAVYGILSSFLLLRTIPEAFATSLGFSLSLLVLILFSIHISEKSVNGILWL EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHH LQIFVLFGVIIAVDALLGFYTGNSIFWGILGQPLMRGNISSVVGNVNFTTDLMGMLLPIV HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCHHHCCCHHHHHCCCCHHHHHHHHHHHHH LYLAIITRRLWRNERARVLFYTITYALFLSVVLAGQTRGVYYSLIGAFLVVLLGVLAGMQ HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH KKVKPKIRPLSLVVLLVITIFLIYGYSTDSIFTRGTFSISERLSSSANKSAADFRTFLWK HHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHCCCCCHHHHHHHHHHH TAIKQWENSKILGTGFGSYKYFSSENMGRVLNEEPRYMYIAGLNSIRAHGEYFQQLAETG HHHHHCCCCCEEECCCCCCCEECCCCCCHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCC LIGLSLVLLALGSLVLYYFRIIFRLKDFDLLLLFSVLAGSFSVIVLHSVVSFPAHFMPNA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCH LLAVTVAGAALSPVFRSNSFQLKKISINRWTGMLMIVISLIAAVLMSRNYLTEAFFTRGY HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC IGYKTYISATAQIPDLRNSVVKIKRDLNSLENFDGEFSYLATDTYINQKLDSLKETYPKA CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCC PDTLLYLIATESHKSEFSTKQNRIKDKLKTAADTLMMAQHAAIRGYYSGISNLDSSLFFS CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH RGFNLSAAFMGDFLKTSDRTEDFVLRLMNSPREAQLKLIEDAFTGKDLNTEYLTGYKKPR CCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCH EIVQPLLKRSQRHLFLEEFPILFNKALTRADLSRLLNEINFSILYSFQAKWDAIDYYILS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCEEEEEEE MQLGPDAQVMRNTARTYFDAFTQAKDVTAELKKLIPYLNKEDRKKLYELIERIKNLPLKL EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH RDEFEYIYDRTISLIPGAWRYFNNWEYIYSDYARELVLLYGPKDSLDKILKIVEKELYVC HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHH RYMKETRWSIPDNTFDLLLILSQEMKGNEALRLKRKILSLYEEAYQWNREQLKNFRKERI HHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH EKIPENNPNRQKYEQIYSRMKDFVNRYEILKKSVED HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA