Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

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The map label for this gene is 239617891

Identifier: 239617891

GI number: 239617891

Start: 1630138

End: 1632948

Strand: Reverse

Name: 239617891

Synonym: Kole_1519

Alternate gene names: NA

Gene position: 1632948-1630138 (Counterclockwise)

Preceding gene: 239617892

Following gene: 239617885

Centisome position: 70.93

GC content: 41.41

Gene sequence:

>2811_bases
ATGAAAAAAGGGGAAAAGCTATTTTATTTGCTCTTCATCGCGGGATCTTCACTTTTTGCTGTTAAAGGCATAACCTGGGA
TATGGCTCTTCCAAAGTTTTTCTATGCCTCGGTATTCTTAGCCGCCCTCTTCGTCGCAAAAGGAATGCGGCTCTCTAAGC
AACCTCAAAGTATTTCCTTATCTATTCCCCATTTTTTTGCGGTCGTGTATGCTGTTTATGGGATTCTATCGAGTTTTTTG
CTTTTAAGGACCATTCCAGAAGCTTTTGCAACCTCTCTGGGTTTTTCACTGAGTCTCCTGGTCCTTATCCTGTTTTCAAT
ACATATCTCTGAAAAATCCGTTAATGGTATTTTGTGGCTGCTTCAGATATTCGTGCTTTTTGGTGTTATCATAGCTGTTG
ATGCCCTTTTGGGTTTTTACACCGGCAACTCGATTTTCTGGGGCATATTGGGCCAACCGCTGATGCGCGGGAATATCTCT
TCAGTGGTTGGAAACGTCAACTTCACCACTGACCTTATGGGAATGCTGCTGCCAATCGTCTTGTATCTGGCGATAATAAC
ACGAAGACTCTGGAGAAACGAACGAGCGAGAGTACTTTTTTATACCATCACCTATGCATTATTTCTGAGCGTTGTGCTGG
CCGGACAAACCAGGGGTGTTTACTATTCGCTCATCGGTGCCTTTCTGGTGGTTCTTCTAGGGGTACTCGCCGGAATGCAA
AAAAAAGTAAAGCCGAAGATAAGGCCCCTTTCACTGGTTGTGCTTTTGGTTATCACTATTTTCCTTATTTATGGCTATTC
GACCGATTCGATATTTACACGTGGCACTTTTAGTATCTCCGAAAGGCTCTCATCTAGCGCAAATAAAAGCGCTGCGGATT
TTCGAACATTTTTATGGAAAACAGCCATAAAACAATGGGAGAATTCAAAGATTCTGGGCACGGGGTTCGGGAGCTACAAG
TATTTCTCTTCAGAGAACATGGGAAGAGTGCTCAACGAAGAACCCCGATATATGTACATCGCCGGATTAAACAGTATCAG
GGCACACGGAGAATATTTTCAGCAACTGGCAGAAACCGGATTGATCGGCCTTTCTCTTGTTCTACTTGCACTTGGTTCAC
TGGTACTTTATTACTTCAGAATCATCTTTCGTTTGAAGGATTTTGACCTCCTCTTACTCTTTTCCGTACTCGCTGGTTCT
TTCAGCGTAATCGTTTTGCACAGCGTGGTATCCTTTCCGGCTCACTTTATGCCGAACGCTTTGCTGGCTGTGACGGTTGC
TGGAGCAGCGCTATCACCGGTATTTAGGTCTAACAGTTTTCAACTGAAAAAGATTTCTATCAACAGATGGACGGGAATGC
TAATGATCGTCATCTCCCTGATAGCGGCTGTTCTGATGTCACGCAACTACCTCACAGAAGCCTTCTTCACCAGAGGTTAC
ATAGGATATAAAACCTACATATCTGCCACTGCCCAAATTCCTGATCTCAGGAACTCAGTTGTAAAGATAAAAAGAGATTT
AAACAGTCTCGAAAACTTTGATGGGGAATTCAGCTATCTCGCAACGGATACCTACATTAATCAAAAACTCGATTCACTCA
AAGAAACGTACCCCAAAGCTCCTGATACCCTGTTATATCTCATAGCTACCGAAAGCCACAAAAGTGAATTCTCAACCAAA
CAAAATAGGATAAAAGACAAGCTCAAAACCGCCGCAGACACTTTGATGATGGCTCAACACGCAGCAATCAGAGGATATTA
TAGCGGGATCTCCAACCTGGATTCCTCTCTGTTCTTCTCCAGAGGATTCAACCTATCAGCTGCCTTCATGGGTGATTTCC
TCAAAACCTCAGATAGAACAGAGGATTTCGTACTGAGATTGATGAACTCACCACGCGAAGCTCAACTAAAACTGATAGAG
GACGCTTTTACAGGCAAAGATTTGAATACAGAATATTTGACTGGATACAAAAAACCAAGAGAAATTGTTCAACCTTTGCT
TAAAAGATCCCAGAGACATCTTTTCCTCGAAGAATTCCCGATTCTCTTTAACAAAGCTTTAACCCGGGCTGATCTATCCC
GATTACTTAACGAGATCAATTTCAGCATTTTGTATTCTTTCCAGGCAAAGTGGGACGCTATCGATTACTACATACTATCA
ATGCAGCTTGGACCTGATGCCCAGGTGATGCGAAATACCGCCAGAACATATTTTGACGCTTTCACTCAGGCAAAAGATGT
CACCGCCGAACTGAAAAAACTGATACCTTACCTGAATAAAGAAGACAGGAAAAAGCTTTACGAACTGATCGAGAGGATCA
AAAACCTTCCTTTGAAATTACGTGATGAATTTGAATACATCTATGATAGGACTATCTCACTTATTCCCGGTGCATGGAGA
TATTTTAATAACTGGGAATACATTTACAGTGATTATGCGAGAGAACTAGTTCTACTCTATGGACCCAAAGACTCTTTAGA
TAAGATCCTCAAAATTGTAGAAAAAGAACTCTACGTTTGTAGATATATGAAGGAAACTCGTTGGAGTATTCCTGATAACA
CGTTCGATCTTTTACTTATACTATCTCAGGAAATGAAAGGAAACGAAGCGTTAAGACTAAAAAGAAAGATACTCTCACTT
TATGAAGAAGCATACCAATGGAACCGAGAACAGCTTAAAAACTTCCGCAAAGAAAGGATTGAGAAAATTCCAGAAAATAA
TCCTAATCGTCAGAAATATGAACAGATCTACTCGAGGATGAAAGACTTCGTCAATAGATACGAAATACTCAAAAAAAGCG
TGGAAGATTAA

Upstream 100 bases:

>100_bases
TGATGGTCCCAGGACGAGACGTTTCATCGTTACAGCCACCCCCTGCGACCCAAAGTAGGCACTGCAAATCTCATAACCCT
AAACTGTCGGGGGTGATTTG

Downstream 100 bases:

>100_bases
TCAACAAAAAAAGGGGCCTTCCAAGCCCCCTCATTTCTCTAAAAGAGTATTTTCCCTCCACCATCAGGATCTTTCGGTCC
TTTTGGCTTAAGCTTTTTGA

Product: O-antigen polymerase

Products: NA

Alternate protein names: O-Antigen Polymerase Family

Number of amino acids: Translated: 936; Mature: 936

Protein sequence:

>936_residues
MKKGEKLFYLLFIAGSSLFAVKGITWDMALPKFFYASVFLAALFVAKGMRLSKQPQSISLSIPHFFAVVYAVYGILSSFL
LLRTIPEAFATSLGFSLSLLVLILFSIHISEKSVNGILWLLQIFVLFGVIIAVDALLGFYTGNSIFWGILGQPLMRGNIS
SVVGNVNFTTDLMGMLLPIVLYLAIITRRLWRNERARVLFYTITYALFLSVVLAGQTRGVYYSLIGAFLVVLLGVLAGMQ
KKVKPKIRPLSLVVLLVITIFLIYGYSTDSIFTRGTFSISERLSSSANKSAADFRTFLWKTAIKQWENSKILGTGFGSYK
YFSSENMGRVLNEEPRYMYIAGLNSIRAHGEYFQQLAETGLIGLSLVLLALGSLVLYYFRIIFRLKDFDLLLLFSVLAGS
FSVIVLHSVVSFPAHFMPNALLAVTVAGAALSPVFRSNSFQLKKISINRWTGMLMIVISLIAAVLMSRNYLTEAFFTRGY
IGYKTYISATAQIPDLRNSVVKIKRDLNSLENFDGEFSYLATDTYINQKLDSLKETYPKAPDTLLYLIATESHKSEFSTK
QNRIKDKLKTAADTLMMAQHAAIRGYYSGISNLDSSLFFSRGFNLSAAFMGDFLKTSDRTEDFVLRLMNSPREAQLKLIE
DAFTGKDLNTEYLTGYKKPREIVQPLLKRSQRHLFLEEFPILFNKALTRADLSRLLNEINFSILYSFQAKWDAIDYYILS
MQLGPDAQVMRNTARTYFDAFTQAKDVTAELKKLIPYLNKEDRKKLYELIERIKNLPLKLRDEFEYIYDRTISLIPGAWR
YFNNWEYIYSDYARELVLLYGPKDSLDKILKIVEKELYVCRYMKETRWSIPDNTFDLLLILSQEMKGNEALRLKRKILSL
YEEAYQWNREQLKNFRKERIEKIPENNPNRQKYEQIYSRMKDFVNRYEILKKSVED

Sequences:

>Translated_936_residues
MKKGEKLFYLLFIAGSSLFAVKGITWDMALPKFFYASVFLAALFVAKGMRLSKQPQSISLSIPHFFAVVYAVYGILSSFL
LLRTIPEAFATSLGFSLSLLVLILFSIHISEKSVNGILWLLQIFVLFGVIIAVDALLGFYTGNSIFWGILGQPLMRGNIS
SVVGNVNFTTDLMGMLLPIVLYLAIITRRLWRNERARVLFYTITYALFLSVVLAGQTRGVYYSLIGAFLVVLLGVLAGMQ
KKVKPKIRPLSLVVLLVITIFLIYGYSTDSIFTRGTFSISERLSSSANKSAADFRTFLWKTAIKQWENSKILGTGFGSYK
YFSSENMGRVLNEEPRYMYIAGLNSIRAHGEYFQQLAETGLIGLSLVLLALGSLVLYYFRIIFRLKDFDLLLLFSVLAGS
FSVIVLHSVVSFPAHFMPNALLAVTVAGAALSPVFRSNSFQLKKISINRWTGMLMIVISLIAAVLMSRNYLTEAFFTRGY
IGYKTYISATAQIPDLRNSVVKIKRDLNSLENFDGEFSYLATDTYINQKLDSLKETYPKAPDTLLYLIATESHKSEFSTK
QNRIKDKLKTAADTLMMAQHAAIRGYYSGISNLDSSLFFSRGFNLSAAFMGDFLKTSDRTEDFVLRLMNSPREAQLKLIE
DAFTGKDLNTEYLTGYKKPREIVQPLLKRSQRHLFLEEFPILFNKALTRADLSRLLNEINFSILYSFQAKWDAIDYYILS
MQLGPDAQVMRNTARTYFDAFTQAKDVTAELKKLIPYLNKEDRKKLYELIERIKNLPLKLRDEFEYIYDRTISLIPGAWR
YFNNWEYIYSDYARELVLLYGPKDSLDKILKIVEKELYVCRYMKETRWSIPDNTFDLLLILSQEMKGNEALRLKRKILSL
YEEAYQWNREQLKNFRKERIEKIPENNPNRQKYEQIYSRMKDFVNRYEILKKSVED
>Mature_936_residues
MKKGEKLFYLLFIAGSSLFAVKGITWDMALPKFFYASVFLAALFVAKGMRLSKQPQSISLSIPHFFAVVYAVYGILSSFL
LLRTIPEAFATSLGFSLSLLVLILFSIHISEKSVNGILWLLQIFVLFGVIIAVDALLGFYTGNSIFWGILGQPLMRGNIS
SVVGNVNFTTDLMGMLLPIVLYLAIITRRLWRNERARVLFYTITYALFLSVVLAGQTRGVYYSLIGAFLVVLLGVLAGMQ
KKVKPKIRPLSLVVLLVITIFLIYGYSTDSIFTRGTFSISERLSSSANKSAADFRTFLWKTAIKQWENSKILGTGFGSYK
YFSSENMGRVLNEEPRYMYIAGLNSIRAHGEYFQQLAETGLIGLSLVLLALGSLVLYYFRIIFRLKDFDLLLLFSVLAGS
FSVIVLHSVVSFPAHFMPNALLAVTVAGAALSPVFRSNSFQLKKISINRWTGMLMIVISLIAAVLMSRNYLTEAFFTRGY
IGYKTYISATAQIPDLRNSVVKIKRDLNSLENFDGEFSYLATDTYINQKLDSLKETYPKAPDTLLYLIATESHKSEFSTK
QNRIKDKLKTAADTLMMAQHAAIRGYYSGISNLDSSLFFSRGFNLSAAFMGDFLKTSDRTEDFVLRLMNSPREAQLKLIE
DAFTGKDLNTEYLTGYKKPREIVQPLLKRSQRHLFLEEFPILFNKALTRADLSRLLNEINFSILYSFQAKWDAIDYYILS
MQLGPDAQVMRNTARTYFDAFTQAKDVTAELKKLIPYLNKEDRKKLYELIERIKNLPLKLRDEFEYIYDRTISLIPGAWR
YFNNWEYIYSDYARELVLLYGPKDSLDKILKIVEKELYVCRYMKETRWSIPDNTFDLLLILSQEMKGNEALRLKRKILSL
YEEAYQWNREQLKNFRKERIEKIPENNPNRQKYEQIYSRMKDFVNRYEILKKSVED

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 107522; Mature: 107522

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGEKLFYLLFIAGSSLFAVKGITWDMALPKFFYASVFLAALFVAKGMRLSKQPQSISL
CCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
SIPHFFAVVYAVYGILSSFLLLRTIPEAFATSLGFSLSLLVLILFSIHISEKSVNGILWL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHH
LQIFVLFGVIIAVDALLGFYTGNSIFWGILGQPLMRGNISSVVGNVNFTTDLMGMLLPIV
HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCHHHCCCHHHHHCCCCHHHHHHHHHHHHH
LYLAIITRRLWRNERARVLFYTITYALFLSVVLAGQTRGVYYSLIGAFLVVLLGVLAGMQ
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
KKVKPKIRPLSLVVLLVITIFLIYGYSTDSIFTRGTFSISERLSSSANKSAADFRTFLWK
HHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHCCCCCHHHHHHHHHHH
TAIKQWENSKILGTGFGSYKYFSSENMGRVLNEEPRYMYIAGLNSIRAHGEYFQQLAETG
HHHHHCCCCCEEECCCCCCCEECCCCCCHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCC
LIGLSLVLLALGSLVLYYFRIIFRLKDFDLLLLFSVLAGSFSVIVLHSVVSFPAHFMPNA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCH
LLAVTVAGAALSPVFRSNSFQLKKISINRWTGMLMIVISLIAAVLMSRNYLTEAFFTRGY
HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
IGYKTYISATAQIPDLRNSVVKIKRDLNSLENFDGEFSYLATDTYINQKLDSLKETYPKA
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCC
PDTLLYLIATESHKSEFSTKQNRIKDKLKTAADTLMMAQHAAIRGYYSGISNLDSSLFFS
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
RGFNLSAAFMGDFLKTSDRTEDFVLRLMNSPREAQLKLIEDAFTGKDLNTEYLTGYKKPR
CCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCH
EIVQPLLKRSQRHLFLEEFPILFNKALTRADLSRLLNEINFSILYSFQAKWDAIDYYILS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCEEEEEEE
MQLGPDAQVMRNTARTYFDAFTQAKDVTAELKKLIPYLNKEDRKKLYELIERIKNLPLKL
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH
RDEFEYIYDRTISLIPGAWRYFNNWEYIYSDYARELVLLYGPKDSLDKILKIVEKELYVC
HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHH
RYMKETRWSIPDNTFDLLLILSQEMKGNEALRLKRKILSLYEEAYQWNREQLKNFRKERI
HHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
EKIPENNPNRQKYEQIYSRMKDFVNRYEILKKSVED
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKGEKLFYLLFIAGSSLFAVKGITWDMALPKFFYASVFLAALFVAKGMRLSKQPQSISL
CCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
SIPHFFAVVYAVYGILSSFLLLRTIPEAFATSLGFSLSLLVLILFSIHISEKSVNGILWL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHH
LQIFVLFGVIIAVDALLGFYTGNSIFWGILGQPLMRGNISSVVGNVNFTTDLMGMLLPIV
HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCHHHCCCHHHHHCCCCHHHHHHHHHHHHH
LYLAIITRRLWRNERARVLFYTITYALFLSVVLAGQTRGVYYSLIGAFLVVLLGVLAGMQ
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
KKVKPKIRPLSLVVLLVITIFLIYGYSTDSIFTRGTFSISERLSSSANKSAADFRTFLWK
HHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHCCCCCHHHHHHHHHHH
TAIKQWENSKILGTGFGSYKYFSSENMGRVLNEEPRYMYIAGLNSIRAHGEYFQQLAETG
HHHHHCCCCCEEECCCCCCCEECCCCCCHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCC
LIGLSLVLLALGSLVLYYFRIIFRLKDFDLLLLFSVLAGSFSVIVLHSVVSFPAHFMPNA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCH
LLAVTVAGAALSPVFRSNSFQLKKISINRWTGMLMIVISLIAAVLMSRNYLTEAFFTRGY
HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
IGYKTYISATAQIPDLRNSVVKIKRDLNSLENFDGEFSYLATDTYINQKLDSLKETYPKA
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCC
PDTLLYLIATESHKSEFSTKQNRIKDKLKTAADTLMMAQHAAIRGYYSGISNLDSSLFFS
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
RGFNLSAAFMGDFLKTSDRTEDFVLRLMNSPREAQLKLIEDAFTGKDLNTEYLTGYKKPR
CCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCH
EIVQPLLKRSQRHLFLEEFPILFNKALTRADLSRLLNEINFSILYSFQAKWDAIDYYILS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCEEEEEEE
MQLGPDAQVMRNTARTYFDAFTQAKDVTAELKKLIPYLNKEDRKKLYELIERIKNLPLKL
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCH
RDEFEYIYDRTISLIPGAWRYFNNWEYIYSDYARELVLLYGPKDSLDKILKIVEKELYVC
HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHH
RYMKETRWSIPDNTFDLLLILSQEMKGNEALRLKRKILSLYEEAYQWNREQLKNFRKERI
HHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
EKIPENNPNRQKYEQIYSRMKDFVNRYEILKKSVED
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA