| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617232
Identifier: 239617232
GI number: 239617232
Start: 886473
End: 887330
Strand: Reverse
Name: 239617232
Synonym: Kole_0840
Alternate gene names: NA
Gene position: 887330-886473 (Counterclockwise)
Preceding gene: 239617233
Following gene: 239617231
Centisome position: 38.54
GC content: 38.58
Gene sequence:
>858_bases GTGGGCAAGGTAGTACTTGTCATACTTAGTATTTTGGCAACTATAATCCTCCTGATTATCACAGTAATATTTATAGCAAA CTTGCTGTTCAACCAGAAAGTGGCAAGAGAAGTGAAAGAGTTATTTGCTGATAATTCAGAAGATAGCGATGGGATCATTC AAAAATCAGATTTAGAGAAGTTACCAATACCGGTCCAGAAATGGCTGAAATATTCACAGGTAGTTGAAAAAGAAAAAATC AGAGCAGTTCGCTTAAAACAAAAAGCGATAATGAGGTTGAAGGAAGAACAATCATGGATGCCGGTGGAAGCAGAGCAATA TTTTACGATAGATGAACCCGGATTTATCTGGAAAGCCAGAATTAAAGCTGCTCCGTTATTTTATATTGTTGGAAGGGATA AGTATTATAAAGGCAAAGGAAATATGCTTATCAAGGTTCTTTCATTAATCCCGGTCGCGGATTCTAAAGGGAAAGAAATG GATCAGGGCACGTTGTTGCGGTATCTTGCTGAAATGGTATGGTTTCCAACAGCGGCTTTAAGCAGCTACATTACCTGGGA AGAAATCGATACGAACTCAGCAAAAACCACCATGAGTTACGGAGGGATAACAGCTTCTGGAGTATTTACCTTTAACGATA AGGGCGAAGTTATTAACTTTGTTGCTGAAAGATACAGGGAACATGATGGACAATACTCATTGGAAACATGGTCGGTTACT ATGGGGAATTATGAAGAATTCGATGGCATAAAGATCCCTACTATGGGAGAAGTTACATGGAAACTTGAAACCGGGGATTT CACATGGTTTAAGTTTGAGGTTACCGAAATTGAATATAACAAACCGGTTGTTTATTAG
Upstream 100 bases:
>100_bases ACGCAGCCCTGCATTTCGGACAGCTATGCTAACCCTTTCAGATTCCCGGTTCTCGTTTTTTAAAGTACATGAACGGGTAG TGAAAAAAGGAGCTGATGAC
Downstream 100 bases:
>100_bases GTACTCTCATTGAAATAACCGCTGTTTTTGTATCCCTTTACTTCATTGATATAATCTTACTGGATTTTTGTAAAAAAGGG GAAGGGGGTCACAAAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MGKVVLVILSILATIILLIITVIFIANLLFNQKVAREVKELFADNSEDSDGIIQKSDLEKLPIPVQKWLKYSQVVEKEKI RAVRLKQKAIMRLKEEQSWMPVEAEQYFTIDEPGFIWKARIKAAPLFYIVGRDKYYKGKGNMLIKVLSLIPVADSKGKEM DQGTLLRYLAEMVWFPTAALSSYITWEEIDTNSAKTTMSYGGITASGVFTFNDKGEVINFVAERYREHDGQYSLETWSVT MGNYEEFDGIKIPTMGEVTWKLETGDFTWFKFEVTEIEYNKPVVY
Sequences:
>Translated_285_residues MGKVVLVILSILATIILLIITVIFIANLLFNQKVAREVKELFADNSEDSDGIIQKSDLEKLPIPVQKWLKYSQVVEKEKI RAVRLKQKAIMRLKEEQSWMPVEAEQYFTIDEPGFIWKARIKAAPLFYIVGRDKYYKGKGNMLIKVLSLIPVADSKGKEM DQGTLLRYLAEMVWFPTAALSSYITWEEIDTNSAKTTMSYGGITASGVFTFNDKGEVINFVAERYREHDGQYSLETWSVT MGNYEEFDGIKIPTMGEVTWKLETGDFTWFKFEVTEIEYNKPVVY >Mature_284_residues GKVVLVILSILATIILLIITVIFIANLLFNQKVAREVKELFADNSEDSDGIIQKSDLEKLPIPVQKWLKYSQVVEKEKIR AVRLKQKAIMRLKEEQSWMPVEAEQYFTIDEPGFIWKARIKAAPLFYIVGRDKYYKGKGNMLIKVLSLIPVADSKGKEMD QGTLLRYLAEMVWFPTAALSSYITWEEIDTNSAKTTMSYGGITASGVFTFNDKGEVINFVAERYREHDGQYSLETWSVTM GNYEEFDGIKIPTMGEVTWKLETGDFTWFKFEVTEIEYNKPVVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32782; Mature: 32651
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVVLVILSILATIILLIITVIFIANLLFNQKVAREVKELFADNSEDSDGIIQKSDLEK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCC LPIPVQKWLKYSQVVEKEKIRAVRLKQKAIMRLKEEQSWMPVEAEQYFTIDEPGFIWKAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEE IKAAPLFYIVGRDKYYKGKGNMLIKVLSLIPVADSKGKEMDQGTLLRYLAEMVWFPTAAL ECCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCHHHH SSYITWEEIDTNSAKTTMSYGGITASGVFTFNDKGEVINFVAERYREHDGQYSLETWSVT HHCCCHHHCCCCCCCEEEECCCEEECEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEE MGNYEEFDGIKIPTMGEVTWKLETGDFTWFKFEVTEIEYNKPVVY ECCHHHCCCEECCCCCCEEEEEECCCEEEEEEEEEEEECCCCCCC >Mature Secondary Structure GKVVLVILSILATIILLIITVIFIANLLFNQKVAREVKELFADNSEDSDGIIQKSDLEK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCC LPIPVQKWLKYSQVVEKEKIRAVRLKQKAIMRLKEEQSWMPVEAEQYFTIDEPGFIWKAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEE IKAAPLFYIVGRDKYYKGKGNMLIKVLSLIPVADSKGKEMDQGTLLRYLAEMVWFPTAAL ECCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCHHHH SSYITWEEIDTNSAKTTMSYGGITASGVFTFNDKGEVINFVAERYREHDGQYSLETWSVT HHCCCHHHCCCCCCCEEEECCCEEECEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEE MGNYEEFDGIKIPTMGEVTWKLETGDFTWFKFEVTEIEYNKPVVY ECCHHHCCCEECCCCCCEEEEEECCCEEEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA