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The map label for this gene is ybhR [H]

Identifier: 239617214

GI number: 239617214

Start: 870939

End: 872015

Strand: Reverse

Name: ybhR [H]

Synonym: Kole_0821

Alternate gene names: 239617214

Gene position: 872015-870939 (Counterclockwise)

Preceding gene: 239617215

Following gene: 239617209

Centisome position: 37.88

GC content: 42.34

Gene sequence:

>1077_bases
ATGAAGTACGCGGTACAAATAGCTATAAAAGATCTAAAATACTTTTTCCGCAGCAAGACAGCAATATTTGCCTTTCTTGT
TATGCCTGTCTTCATGATGCTCATAACCGGATACATCTTTCCAAAAGTGCAATCCGGGGACAACATAAAGATTGCTGTTT
ATTCTCTAGATAAAGGTTTTAAAAAGATGATAGAAAGCAAAGGAAGCGAAAATTTCGTCTTCGTTGAAAGTGAAGAGGAA
CTCCGAGAGGTCCTCCTTGAGGAAAAAGTTGACGTTGCCTTGGTAATTCCTGAGGGATTTCTAACCGCGGTACTGAGAAA
ACAAGAGGCCTCTATAAAACTGATTCCCAGCCCCTCTAACCCTCAAATAGCCATGGCTGCTGCTCAGGGAGTAACCTCGT
CTATTGGTGCTTCCCTTGGGAGTGTGGGAGGAAAATTTGATGTTGAAATAGAAAATCCAGGAGGCGGCGAATTCAATTAC
TATGAATTCATGGCACCCGGAATAATGGCTATGGTTGCAATTATGAGTGTTGTTAACGGTTTAGCGGCTGCAATTACTAT
GGAAAAAGAAAGAGGAACTCTCGATGGAATTCTGGCAACTCCTATCCCGAGGTCTTCTATCGTTCTTGGCAAAACCCTTG
CACAAACTGTGAGAGGGATTTTACAGGCTATAATCATACTGGCTTTGGCGGTATTGCTGTTTGGTGTTACTCTCCACGGT
TCTTTGCTTTTAACATTACTTATACTGATTCTTGGTATATTTAGTTTTATCGGGGTCGGCATAATCGTAACAGCTGGAGC
ACCGGATCAGGAAACGAGTCAAATGGTGCTTACAACCATCTCATTCCCCATGATGTTCCTTTCAGGCGTGTTTTTTCCTG
TGGAACAGATGCCGTCGTTCATGCAAACTTTGTCGAAGTTCTTCCCGCTCACTTACACTGCTGATGCACTCAGAAAAGTA
ATGATACTCGGAGGCAATTTATCTAACGTATCAAATGATGTGGTTATGCTAGTTATATTCGCAATCGTGACACTTTCCCT
TGCCGTCCCGTTGTTTGGAAGACTTACAACGAATTAA

Upstream 100 bases:

>100_bases
AACCATCCCTTGAGGATGTTTTTATCAAACTCACAGGCCACGAGATGCGCGACCAGGCAGTTAAGAAAATGAAATTCATA
GGGAGAAGGATGATGCATTC

Downstream 100 bases:

>100_bases
AAAAGGAATCTGGCGCTTGCCGGATTCCTTTTTTACTAATAACGAAGTTACCACGGCCGTGACAAAGTCACATATAGCTA
TTGTGAAACAGTTCTCACCG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKYAVQIAIKDLKYFFRSKTAIFAFLVMPVFMMLITGYIFPKVQSGDNIKIAVYSLDKGFKKMIESKGSENFVFVESEEE
LREVLLEEKVDVALVIPEGFLTAVLRKQEASIKLIPSPSNPQIAMAAAQGVTSSIGASLGSVGGKFDVEIENPGGGEFNY
YEFMAPGIMAMVAIMSVVNGLAAAITMEKERGTLDGILATPIPRSSIVLGKTLAQTVRGILQAIIILALAVLLFGVTLHG
SLLLTLLILILGIFSFIGVGIIVTAGAPDQETSQMVLTTISFPMMFLSGVFFPVEQMPSFMQTLSKFFPLTYTADALRKV
MILGGNLSNVSNDVVMLVIFAIVTLSLAVPLFGRLTTN

Sequences:

>Translated_358_residues
MKYAVQIAIKDLKYFFRSKTAIFAFLVMPVFMMLITGYIFPKVQSGDNIKIAVYSLDKGFKKMIESKGSENFVFVESEEE
LREVLLEEKVDVALVIPEGFLTAVLRKQEASIKLIPSPSNPQIAMAAAQGVTSSIGASLGSVGGKFDVEIENPGGGEFNY
YEFMAPGIMAMVAIMSVVNGLAAAITMEKERGTLDGILATPIPRSSIVLGKTLAQTVRGILQAIIILALAVLLFGVTLHG
SLLLTLLILILGIFSFIGVGIIVTAGAPDQETSQMVLTTISFPMMFLSGVFFPVEQMPSFMQTLSKFFPLTYTADALRKV
MILGGNLSNVSNDVVMLVIFAIVTLSLAVPLFGRLTTN
>Mature_358_residues
MKYAVQIAIKDLKYFFRSKTAIFAFLVMPVFMMLITGYIFPKVQSGDNIKIAVYSLDKGFKKMIESKGSENFVFVESEEE
LREVLLEEKVDVALVIPEGFLTAVLRKQEASIKLIPSPSNPQIAMAAAQGVTSSIGASLGSVGGKFDVEIENPGGGEFNY
YEFMAPGIMAMVAIMSVVNGLAAAITMEKERGTLDGILATPIPRSSIVLGKTLAQTVRGILQAIIILALAVLLFGVTLHG
SLLLTLLILILGIFSFIGVGIIVTAGAPDQETSQMVLTTISFPMMFLSGVFFPVEQMPSFMQTLSKFFPLTYTADALRKV
MILGGNLSNVSNDVVMLVIFAIVTLSLAVPLFGRLTTN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=361, Percent_Identity=24.0997229916898, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1787011, Length=336, Percent_Identity=23.2142857142857, Blast_Score=79, Evalue=3e-16,
Organism=Drosophila melanogaster, GI85725260, Length=212, Percent_Identity=23.5849056603774, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI85725262, Length=213, Percent_Identity=23.4741784037559, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24650855, Length=275, Percent_Identity=21.8181818181818, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24650853, Length=194, Percent_Identity=24.7422680412371, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 38634; Mature: 38634

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYAVQIAIKDLKYFFRSKTAIFAFLVMPVFMMLITGYIFPKVQSGDNIKIAVYSLDKGF
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHH
KKMIESKGSENFVFVESEEELREVLLEEKVDVALVIPEGFLTAVLRKQEASIKLIPSPSN
HHHHHCCCCCCEEEEECHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEEEECCCCC
PQIAMAAAQGVTSSIGASLGSVGGKFDVEIENPGGGEFNYYEFMAPGIMAMVAIMSVVNG
CCEEEHHHHCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LAAAITMEKERGTLDGILATPIPRSSIVLGKTLAQTVRGILQAIIILALAVLLFGVTLHG
HHHHHEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLLTLLILILGIFSFIGVGIIVTAGAPDQETSQMVLTTISFPMMFLSGVFFPVEQMPSF
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MQTLSKFFPLTYTADALRKVMILGGNLSNVSNDVVMLVIFAIVTLSLAVPLFGRLTTN
HHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKYAVQIAIKDLKYFFRSKTAIFAFLVMPVFMMLITGYIFPKVQSGDNIKIAVYSLDKGF
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHH
KKMIESKGSENFVFVESEEELREVLLEEKVDVALVIPEGFLTAVLRKQEASIKLIPSPSN
HHHHHCCCCCCEEEEECHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCCEEEECCCCC
PQIAMAAAQGVTSSIGASLGSVGGKFDVEIENPGGGEFNYYEFMAPGIMAMVAIMSVVNG
CCEEEHHHHCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LAAAITMEKERGTLDGILATPIPRSSIVLGKTLAQTVRGILQAIIILALAVLLFGVTLHG
HHHHHEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLLTLLILILGIFSFIGVGIIVTAGAPDQETSQMVLTTISFPMMFLSGVFFPVEQMPSF
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MQTLSKFFPLTYTADALRKVMILGGNLSNVSNDVVMLVIFAIVTLSLAVPLFGRLTTN
HHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]