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The map label for this gene is ugpB [C]

Identifier: 239617077

GI number: 239617077

Start: 730539

End: 731798

Strand: Reverse

Name: ugpB [C]

Synonym: Kole_0679

Alternate gene names: 239617077

Gene position: 731798-730539 (Counterclockwise)

Preceding gene: 239617078

Following gene: 239617076

Centisome position: 31.79

GC content: 45.0

Gene sequence:

>1260_bases
ATGAGTAAGAAATTTGGCGTTCTGTTAATAAGCCTTTTGCTGGTTGGAATATTCTCAACGCTGGCATTAGGTGCAAAAGT
TACGGTAACTCAGTGGAACTTCCCTCTTTTAGCGAACGAGATGGAAGTTCTCTGGAAACCGCTCATTGAAAAGTTTGAAG
CACAGAATCCAGATATTGAAATCAAAGTCGAGATTCTTCCCTGGGGAGGAAGAGCAGAGAAGCTTCTTACGGCTGTGGCG
GCAAAAAGGCCACCAGATGTGGCATACCTGAATGAGTTCTTCCTTCAGATGTTTGCAGCACGTGGAGCTCTCATTCCTCT
GGAAAAGTACTTATCCAGGGAAGCTCTGGCAAGGTATCCGGAATCCCTTATCGATGCGGTAACCTATAACGGACACGTTT
ATTTAGCACCGGCTCTTGTCTCTACGGTCGGATATTTGTACAACCTCAGGGTTCTCAAGAAAGTTGGCTGGGATGTCAAC
AAGCTTCCTGAAACCTGGGACGACCTTCTCAAACTCTGCAAAATGGTCAAAGAATACGCGATGAAAACAGGAGAAAAGAT
CTGGACAATTGGCTATCCGGCATCAATGGAAGATACGCTTAACATGACCCTTTATCCACTCATCTGGCAGGCAGGTGGAG
ACGTCCTCACTCCTGATCTTAAAAAGGCTGCTTTCAATAGCTGGGCGGGCATTAAAGCTTTGACCTTTGTCAAGTTATTG
TTTGACGAGGGTTACGCTCCAAAAGATCTCATACAGGCTGGTCTCTCAACGAATTACTTCCTCAACGATGAAATAGCCAT
GTGGTTTGGAGCCGATGCCTGGGGTGTTTCACAGCTTCTGGCAGAAGATCCTAATTTGGCTGATTATGCGAAATTCGGAC
CAATCCTGAAGGAAAACAAGAAGATAACTTACGGTACAATGGGTGCCTGGGCTATATTCAGGGGTTCGAGAAATCCCAAA
GCAGCAGCAAAATGGGTTGAATTCCTCATATCCCCTGAAAATAACACTTTCTACAATAAGACGATAGGATACATGTCCCC
GTTAAAAGGCGCGCCACCTCTATATGCTGACAACCCTTTCCTTGGAGTTCTTGAAACTCAGAAGGTCTTTACCCGCGGAG
GTCTTATCGTAAAGGACGAAAGAAGGGTTATGGATGTTATAAAAGAAGCCCAGCAGGCTGTTATAGTTGGGCAAAAGACA
GTCATAGAAGCGCTTAACGATGCTGAAAAAGAAGTTAACTTTATACTCGAAGGTTTCTGA

Upstream 100 bases:

>100_bases
AAAAATATATCACCAAGGGGATAGCCATAGATCTTAAGTAAATGGGTGGGGTAATGAAAACACGAAAGAAGGTTCAACTC
TATTTTGGAGGTGGTATGTT

Downstream 100 bases:

>100_bases
TCTCGGCACGTGGCGGGGTGTGCTTTCATGTTATGGGGGCACACCCCGCCTTATTTCTAGTGTGCAACTGCTTTGAAAGA
GCCGAAAGGCTCAAAGGAGA

Product: extracellular solute-binding protein family 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSKKFGVLLISLLLVGIFSTLALGAKVTVTQWNFPLLANEMEVLWKPLIEKFEAQNPDIEIKVEILPWGGRAEKLLTAVA
AKRPPDVAYLNEFFLQMFAARGALIPLEKYLSREALARYPESLIDAVTYNGHVYLAPALVSTVGYLYNLRVLKKVGWDVN
KLPETWDDLLKLCKMVKEYAMKTGEKIWTIGYPASMEDTLNMTLYPLIWQAGGDVLTPDLKKAAFNSWAGIKALTFVKLL
FDEGYAPKDLIQAGLSTNYFLNDEIAMWFGADAWGVSQLLAEDPNLADYAKFGPILKENKKITYGTMGAWAIFRGSRNPK
AAAKWVEFLISPENNTFYNKTIGYMSPLKGAPPLYADNPFLGVLETQKVFTRGGLIVKDERRVMDVIKEAQQAVIVGQKT
VIEALNDAEKEVNFILEGF

Sequences:

>Translated_419_residues
MSKKFGVLLISLLLVGIFSTLALGAKVTVTQWNFPLLANEMEVLWKPLIEKFEAQNPDIEIKVEILPWGGRAEKLLTAVA
AKRPPDVAYLNEFFLQMFAARGALIPLEKYLSREALARYPESLIDAVTYNGHVYLAPALVSTVGYLYNLRVLKKVGWDVN
KLPETWDDLLKLCKMVKEYAMKTGEKIWTIGYPASMEDTLNMTLYPLIWQAGGDVLTPDLKKAAFNSWAGIKALTFVKLL
FDEGYAPKDLIQAGLSTNYFLNDEIAMWFGADAWGVSQLLAEDPNLADYAKFGPILKENKKITYGTMGAWAIFRGSRNPK
AAAKWVEFLISPENNTFYNKTIGYMSPLKGAPPLYADNPFLGVLETQKVFTRGGLIVKDERRVMDVIKEAQQAVIVGQKT
VIEALNDAEKEVNFILEGF
>Mature_418_residues
SKKFGVLLISLLLVGIFSTLALGAKVTVTQWNFPLLANEMEVLWKPLIEKFEAQNPDIEIKVEILPWGGRAEKLLTAVAA
KRPPDVAYLNEFFLQMFAARGALIPLEKYLSREALARYPESLIDAVTYNGHVYLAPALVSTVGYLYNLRVLKKVGWDVNK
LPETWDDLLKLCKMVKEYAMKTGEKIWTIGYPASMEDTLNMTLYPLIWQAGGDVLTPDLKKAAFNSWAGIKALTFVKLLF
DEGYAPKDLIQAGLSTNYFLNDEIAMWFGADAWGVSQLLAEDPNLADYAKFGPILKENKKITYGTMGAWAIFRGSRNPKA
AAKWVEFLISPENNTFYNKTIGYMSPLKGAPPLYADNPFLGVLETQKVFTRGGLIVKDERRVMDVIKEAQQAVIVGQKTV
IEALNDAEKEVNFILEGF

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46914; Mature: 46783

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKFGVLLISLLLVGIFSTLALGAKVTVTQWNFPLLANEMEVLWKPLIEKFEAQNPDIE
CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEE
IKVEILPWGGRAEKLLTAVAAKRPPDVAYLNEFFLQMFAARGALIPLEKYLSREALARYP
EEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCH
ESLIDAVTYNGHVYLAPALVSTVGYLYNLRVLKKVGWDVNKLPETWDDLLKLCKMVKEYA
HHHHHHHEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH
MKTGEKIWTIGYPASMEDTLNMTLYPLIWQAGGDVLTPDLKKAAFNSWAGIKALTFVKLL
HHCCCEEEEECCCCCCCHHCCCEEEEHHEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHH
FDEGYAPKDLIQAGLSTNYFLNDEIAMWFGADAWGVSQLLAEDPNLADYAKFGPILKENK
HHCCCCCHHHHHHCCCCCEEECCCEEEEECCCHHHHHHHHHCCCCHHHHHHHCCHHHCCC
KITYGTMGAWAIFRGSRNPKAAAKWVEFLISPENNTFYNKTIGYMSPLKGAPPLYADNPF
EEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
LGVLETQKVFTRGGLIVKDERRVMDVIKEAQQAVIVGQKTVIEALNDAEKEVNFILEGF
EEEHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKKFGVLLISLLLVGIFSTLALGAKVTVTQWNFPLLANEMEVLWKPLIEKFEAQNPDIE
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEE
IKVEILPWGGRAEKLLTAVAAKRPPDVAYLNEFFLQMFAARGALIPLEKYLSREALARYP
EEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCH
ESLIDAVTYNGHVYLAPALVSTVGYLYNLRVLKKVGWDVNKLPETWDDLLKLCKMVKEYA
HHHHHHHEECCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHH
MKTGEKIWTIGYPASMEDTLNMTLYPLIWQAGGDVLTPDLKKAAFNSWAGIKALTFVKLL
HHCCCEEEEECCCCCCCHHCCCEEEEHHEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHH
FDEGYAPKDLIQAGLSTNYFLNDEIAMWFGADAWGVSQLLAEDPNLADYAKFGPILKENK
HHCCCCCHHHHHHCCCCCEEECCCEEEEECCCHHHHHHHHHCCCCHHHHHHHCCHHHCCC
KITYGTMGAWAIFRGSRNPKAAAKWVEFLISPENNTFYNKTIGYMSPLKGAPPLYADNPF
EEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
LGVLETQKVFTRGGLIVKDERRVMDVIKEAQQAVIVGQKTVIEALNDAEKEVNFILEGF
EEEHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA