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The map label for this gene is 239617059

Identifier: 239617059

GI number: 239617059

Start: 702543

End: 702812

Strand: Reverse

Name: 239617059

Synonym: Kole_0661

Alternate gene names: NA

Gene position: 702812-702543 (Counterclockwise)

Preceding gene: 239617060

Following gene: 239617057

Centisome position: 30.53

GC content: 35.19

Gene sequence:

>270_bases
GTGTACGTTTTGATTGTGTACGACATAGGAGAGAAGCGGGTAAACAGAGTCTTGAAAGTTTGCCGCCGTTATCTAGATTG
GGTACAAAACTCTGTACTTGAAGGCGAAATAACCAAAACAAATCTTGAAACGTTGAAATCACAGCTAAAACGCATAATAA
AAGTTGAAGAAGATTCTGTTCGAATATACAAGCTTCGGACTGAGAATGATGTTAATCTCGAAATACTCGGAATAGATAAA
AAACAAGTATTTGATGATGGAATTATTTAA

Upstream 100 bases:

>100_bases
AAAAGAAATGTTTCATACAGATATCTCATAAGGCTTGAGCTCTATAAGATAGAAAAACATATTACAGGGGAAAAAGAATA
TATCCCATGGAGAGGTTAAA

Downstream 100 bases:

>100_bases
GGTACCACCAAGAACACAGATTCAATTCCTGTCATTTGAATTCTCCAGAATTCTTATGTTCCTTTCTTCTCCGTTATTGC
ATTTTAATCTTTTATCACGG

Product: CRISPR-associated protein Cas2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MYVLIVYDIGEKRVNRVLKVCRRYLDWVQNSVLEGEITKTNLETLKSQLKRIIKVEEDSVRIYKLRTENDVNLEILGIDK
KQVFDDGII

Sequences:

>Translated_89_residues
MYVLIVYDIGEKRVNRVLKVCRRYLDWVQNSVLEGEITKTNLETLKSQLKRIIKVEEDSVRIYKLRTENDVNLEILGIDK
KQVFDDGII
>Mature_89_residues
MYVLIVYDIGEKRVNRVLKVCRRYLDWVQNSVLEGEITKTNLETLKSQLKRIIKVEEDSVRIYKLRTENDVNLEILGIDK
KQVFDDGII

Specific function: Unknown

COG id: COG1343

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021127
- InterPro:   IPR000640
- InterPro:   IPR019199 [H]

Pfam domain/function: PF09827 CRISPR_Cas2 [H]

EC number: NA

Molecular weight: Translated: 10526; Mature: 10526

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVLIVYDIGEKRVNRVLKVCRRYLDWVQNSVLEGEITKTNLETLKSQLKRIIKVEEDSV
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCE
RIYKLRTENDVNLEILGIDKKQVFDDGII
EEEEEECCCCCEEEEEECCHHHHHCCCCC
>Mature Secondary Structure
MYVLIVYDIGEKRVNRVLKVCRRYLDWVQNSVLEGEITKTNLETLKSQLKRIIKVEEDSV
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCE
RIYKLRTENDVNLEILGIDKKQVFDDGII
EEEEEECCCCCEEEEEECCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]