Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
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Accession | NC_012785 |
Length | 2,302,126 |
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The map label for this gene is 239617057
Identifier: 239617057
GI number: 239617057
Start: 699700
End: 700374
Strand: Reverse
Name: 239617057
Synonym: Kole_0659
Alternate gene names: NA
Gene position: 700374-699700 (Counterclockwise)
Preceding gene: 239617059
Following gene: 239617044
Centisome position: 30.42
GC content: 41.04
Gene sequence:
>675_bases ATGACAGTGTATGAGATGTTAAAAGAAATGGCTGATAACTTTAAAAGCAAGGTAGAACCAGATTACACCTTTCTGGCACA GTTAAATGTAGAAGATACGAATGAATCGTTCTACATCAAGATTGATAATGGCGAGGTTATCCTGGGCAAAGGTGTAAATA ACGAAGCCGATGTTATTTTAACTACAACTTATGATGTTTTGCGCCAGATATACGAAGGGAAGTTCAACGCAATTACAGCT GCTGCGAAAGCCAATTATCTGGATAAAGCGCCTCTGGACTGGAGATTTTCGAATAATAAGAAGATTACTCCTGATACTAT TGCCCGATTCAATTATCTTGGTATGCACCTTTTCAACAGAAGTGATCCTGAAAAGGTTTTGTTGGATGAAGAACATTCAA GGGTTGTTCACGGAGGACATGCTATAGGTTTGTACTATGCCACGGGGCTCAGAAGCGCCTGGTATATGCTGAAAAAGGGT GAGAGTTTGAATCAGGAAGGCGATACGAATCCATTTCATCAAGCGATGATTTTTATTGAAGGCGAGGGTTTTGCTAAGAT TGGGGATAAGACTGTAAAGGTAAAGAAAGGCGAGTCGTATTACATTCCACCGAATACGAGTCACGTAGTCTGGACAGAAA GCGATGAACCATTGGTATTGATCTGGCTCGCCTGA
Upstream 100 bases:
>100_bases GAAAACATTGGACTATTCAAGTAAAGACTAAGTAACAATATATTATTGCTTAGGAAAACTGTCCTGTAATTCTGAAAATA AATTAAGGAGGATTTGAGAA
Downstream 100 bases:
>100_bases GGAAAAGGTGCCTGATAAGCCATTATTTTCATAAGTTTTTAGGAAGTAAAAACGCCCTTCAGCAATTTATTTGCATGAAG GGCGTTTTGATCAAATTATC
Product: Cupin 2 conserved barrel domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTVYEMLKEMADNFKSKVEPDYTFLAQLNVEDTNESFYIKIDNGEVILGKGVNNEADVILTTTYDVLRQIYEGKFNAITA AAKANYLDKAPLDWRFSNNKKITPDTIARFNYLGMHLFNRSDPEKVLLDEEHSRVVHGGHAIGLYYATGLRSAWYMLKKG ESLNQEGDTNPFHQAMIFIEGEGFAKIGDKTVKVKKGESYYIPPNTSHVVWTESDEPLVLIWLA
Sequences:
>Translated_224_residues MTVYEMLKEMADNFKSKVEPDYTFLAQLNVEDTNESFYIKIDNGEVILGKGVNNEADVILTTTYDVLRQIYEGKFNAITA AAKANYLDKAPLDWRFSNNKKITPDTIARFNYLGMHLFNRSDPEKVLLDEEHSRVVHGGHAIGLYYATGLRSAWYMLKKG ESLNQEGDTNPFHQAMIFIEGEGFAKIGDKTVKVKKGESYYIPPNTSHVVWTESDEPLVLIWLA >Mature_223_residues TVYEMLKEMADNFKSKVEPDYTFLAQLNVEDTNESFYIKIDNGEVILGKGVNNEADVILTTTYDVLRQIYEGKFNAITAA AKANYLDKAPLDWRFSNNKKITPDTIARFNYLGMHLFNRSDPEKVLLDEEHSRVVHGGHAIGLYYATGLRSAWYMLKKGE SLNQEGDTNPFHQAMIFIEGEGFAKIGDKTVKVKKGESYYIPPNTSHVVWTESDEPLVLIWLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25484; Mature: 25353
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVYEMLKEMADNFKSKVEPDYTFLAQLNVEDTNESFYIKIDNGEVILGKGVNNEADVIL CCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEECCCCEEEECCCCCCCCEEE TTTYDVLRQIYEGKFNAITAAAKANYLDKAPLDWRFSNNKKITPDTIARFNYLGMHLFNR EEHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCEEECCCCEECHHHHHHHHHHEEEEECC SDPEKVLLDEEHSRVVHGGHAIGLYYATGLRSAWYMLKKGESLNQEGDTNPFHQAMIFIE CCCCEEEECCCCCEEEECCEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEE GEGFAKIGDKTVKVKKGESYYIPPNTSHVVWTESDEPLVLIWLA CCCCEECCCEEEEEECCCEEEECCCCCEEEEECCCCCEEEEEEC >Mature Secondary Structure TVYEMLKEMADNFKSKVEPDYTFLAQLNVEDTNESFYIKIDNGEVILGKGVNNEADVIL CHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEECCCCEEEECCCCCCCCEEE TTTYDVLRQIYEGKFNAITAAAKANYLDKAPLDWRFSNNKKITPDTIARFNYLGMHLFNR EEHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCEEECCCCEECHHHHHHHHHHEEEEECC SDPEKVLLDEEHSRVVHGGHAIGLYYATGLRSAWYMLKKGESLNQEGDTNPFHQAMIFIE CCCCEEEECCCCCEEEECCEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEE GEGFAKIGDKTVKVKKGESYYIPPNTSHVVWTESDEPLVLIWLA CCCCEECCCEEEEEECCCEEEECCCCCEEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA