| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617016
Identifier: 239617016
GI number: 239617016
Start: 662199
End: 662870
Strand: Reverse
Name: 239617016
Synonym: Kole_0616
Alternate gene names: NA
Gene position: 662870-662199 (Counterclockwise)
Preceding gene: 239617017
Following gene: 239617011
Centisome position: 28.79
GC content: 35.27
Gene sequence:
>672_bases GTGGATACAATAAGACTAATGAAATCTTTAAAAGAAGAATCTTCAAACATCGGAACATCCCAGAGGTCTGTTGTTATATC AAAAATAGCTAACAAGTATTATAAAGAAGCTCCGAAATCCGATGAGGAGCTTCTTAAATTTTGTGAGCAGTTGATTGCTG CTAATAATATGGATTTGTTTTCTATTGCAACGCTGTGGATCAAAAAAAGAACAACTATAATTGATATAAAACATTTTCCG GTTATCGAAGGTTGGCTTTTCAAGTATATTCATCATTGGGGTACATGCGACCAATTATGTTACAGGGTTCTCAGTCCTTT TGTGTACAAGTATTCTGAATTATTTTCGAATGTTTTGAAGTGGGCAGAATCGGAAAGAACGTATGTTAGAAGAGCGGCGC CGGTTTCTTTAATTCGTAATGGTGTAAAATCCAGTTTCGTTGTAGAATATGATTTAGACAAGGTTCTAATTGTTGTTGAG AACTTGGAAGACGATCCGCACCATCACATTCAGAAGGCAGTGGGATGGTTACTTAAGTATTCTTATCTAACATATCCAGA TGAAATACTTGATTACTTGCGAAAAAATGTGAAGTCGCTTTCTCGTACAACCTTTAGATACGCATTGGAAAAGGTACCTA AAGAAATTAGACAGGAAATGATGAAGTTATAA
Upstream 100 bases:
>100_bases ATGCATAATGTAGCAAAAGACTACCCACTTATCCTTTTGATACATGGGGATGAAAATACTGAAGTTCCGTTTCAGTCAAG ATATATTTGGAGGGTAATTT
Downstream 100 bases:
>100_bases GATGATAGCACTAATCACGGTAGATTGTCTTGTTTAATATAGTTCTTATAAACTCGGTTTTTTTCTCGCAGTAGCTATCG ACATCATGGCGGTAAGTCTC
Product: DNA alkylation repair enzyme
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MDTIRLMKSLKEESSNIGTSQRSVVISKIANKYYKEAPKSDEELLKFCEQLIAANNMDLFSIATLWIKKRTTIIDIKHFP VIEGWLFKYIHHWGTCDQLCYRVLSPFVYKYSELFSNVLKWAESERTYVRRAAPVSLIRNGVKSSFVVEYDLDKVLIVVE NLEDDPHHHIQKAVGWLLKYSYLTYPDEILDYLRKNVKSLSRTTFRYALEKVPKEIRQEMMKL
Sequences:
>Translated_223_residues MDTIRLMKSLKEESSNIGTSQRSVVISKIANKYYKEAPKSDEELLKFCEQLIAANNMDLFSIATLWIKKRTTIIDIKHFP VIEGWLFKYIHHWGTCDQLCYRVLSPFVYKYSELFSNVLKWAESERTYVRRAAPVSLIRNGVKSSFVVEYDLDKVLIVVE NLEDDPHHHIQKAVGWLLKYSYLTYPDEILDYLRKNVKSLSRTTFRYALEKVPKEIRQEMMKL >Mature_223_residues MDTIRLMKSLKEESSNIGTSQRSVVISKIANKYYKEAPKSDEELLKFCEQLIAANNMDLFSIATLWIKKRTTIIDIKHFP VIEGWLFKYIHHWGTCDQLCYRVLSPFVYKYSELFSNVLKWAESERTYVRRAAPVSLIRNGVKSSFVVEYDLDKVLIVVE NLEDDPHHHIQKAVGWLLKYSYLTYPDEILDYLRKNVKSLSRTTFRYALEKVPKEIRQEMMKL
Specific function: Unknown
COG id: COG4912
COG function: function code L; Predicted DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26324; Mature: 26324
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIRLMKSLKEESSNIGTSQRSVVISKIANKYYKEAPKSDEELLKFCEQLIAANNMDLF CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHH SIATLWIKKRTTIIDIKHFPVIEGWLFKYIHHWGTCDQLCYRVLSPFVYKYSELFSNVLK HHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH WAESERTYVRRAAPVSLIRNGVKSSFVVEYDLDKVLIVVENLEDDPHHHIQKAVGWLLKY HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHH SYLTYPDEILDYLRKNVKSLSRTTFRYALEKVPKEIRQEMMKL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDTIRLMKSLKEESSNIGTSQRSVVISKIANKYYKEAPKSDEELLKFCEQLIAANNMDLF CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHH SIATLWIKKRTTIIDIKHFPVIEGWLFKYIHHWGTCDQLCYRVLSPFVYKYSELFSNVLK HHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH WAESERTYVRRAAPVSLIRNGVKSSFVVEYDLDKVLIVVENLEDDPHHHIQKAVGWLLKY HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHH SYLTYPDEILDYLRKNVKSLSRTTFRYALEKVPKEIRQEMMKL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA