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The map label for this gene is yqfA [C]

Identifier: 239617011

GI number: 239617011

Start: 657498

End: 658199

Strand: Reverse

Name: yqfA [C]

Synonym: Kole_0611

Alternate gene names: 239617011

Gene position: 658199-657498 (Counterclockwise)

Preceding gene: 239617016

Following gene: 239617008

Centisome position: 28.59

GC content: 40.03

Gene sequence:

>702_bases
TTGAGTTTAAAAGATAAAAGCAAGATGGATAAAATGATTTCTTCGGAAGAGTCTAATGAATACGTGAATTCCATTACGCA
CCTTGTTGGTGCTGTTCTTTCTATTGCTGGATTGGTGGTTCTTATTGTTTTTTCAGCTCTTCAGCACAAATGGGTTCATC
TGATAAGCTTCAGTATTTATGGCTTTACGGTGTTTTTGTCAATGCTTGCCAGCAGTCTTTTGCATTTCTTCCTGCTTTTT
AATAAATATCACAGGGTTTTCGGGATTCTTGATCACAGCGCAATATATTTGCTTATAGCTGGGACGTACACACCTTTCTG
TCTTGCCGTGGTTGGTGGTGTACTTGGTTGGACGGTTTTTGGGATCATATGGGGACTGGCGATACTCAACATCGTTATCA
AGTCTGTGTTTTTCAACAAGATACCAAAAAGTATTTCCACAGTCGGATACATTGCTATGGGCTGGTTATCGATAGTTTTG
GTTTACAGTGTTTATGTGCGTTTGGGACTTTTGAGTATTATCCTTATGATCCTTGGGGGATTATTCTACACGGTTGGCGC
AGGGATATTTTTCGCCGGGAAGCCTAATCCAAAACCACCTTATTTTGGGAATCACGAAATCTGGCATATTATGGTACTTC
TGGGCAATATAACATTCTTTGCCGTAATGGTGTTTTTTGTTCTTCCTTATCCTGGTCCCTGA

Upstream 100 bases:

>100_bases
AAGACTCTCGGATCTCGATTGTCGCGCATAACCTACAACCGACAACTCACAACGATGATGAGCGCAGCCATGTGCGAATC
TATGAAAGGAGTTAACTGAT

Downstream 100 bases:

>100_bases
TCTTTAAAAGCTTATAGGTCTTTCAAAAAGAATGTTTCGACCTCTTGTTTATACGGCATTGAATTTGCGGCGCCATATCT
GGTAGCTACTATGGCAGCTT

Product: channel protein, hemolysin III family

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSLKDKSKMDKMISSEESNEYVNSITHLVGAVLSIAGLVVLIVFSALQHKWVHLISFSIYGFTVFLSMLASSLLHFFLLF
NKYHRVFGILDHSAIYLLIAGTYTPFCLAVVGGVLGWTVFGIIWGLAILNIVIKSVFFNKIPKSISTVGYIAMGWLSIVL
VYSVYVRLGLLSIILMILGGLFYTVGAGIFFAGKPNPKPPYFGNHEIWHIMVLLGNITFFAVMVFFVLPYPGP

Sequences:

>Translated_233_residues
MSLKDKSKMDKMISSEESNEYVNSITHLVGAVLSIAGLVVLIVFSALQHKWVHLISFSIYGFTVFLSMLASSLLHFFLLF
NKYHRVFGILDHSAIYLLIAGTYTPFCLAVVGGVLGWTVFGIIWGLAILNIVIKSVFFNKIPKSISTVGYIAMGWLSIVL
VYSVYVRLGLLSIILMILGGLFYTVGAGIFFAGKPNPKPPYFGNHEIWHIMVLLGNITFFAVMVFFVLPYPGP
>Mature_232_residues
SLKDKSKMDKMISSEESNEYVNSITHLVGAVLSIAGLVVLIVFSALQHKWVHLISFSIYGFTVFLSMLASSLLHFFLLFN
KYHRVFGILDHSAIYLLIAGTYTPFCLAVVGGVLGWTVFGIIWGLAILNIVIKSVFFNKIPKSISTVGYIAMGWLSIVLV
YSVYVRLGLLSIILMILGGLFYTVGAGIFFAGKPNPKPPYFGNHEIWHIMVLLGNITFFAVMVFFVLPYPGP

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=211, Percent_Identity=38.3886255924171, Blast_Score=115, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI71996356, Length=228, Percent_Identity=31.140350877193, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 25853; Mature: 25722

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKDKSKMDKMISSEESNEYVNSITHLVGAVLSIAGLVVLIVFSALQHKWVHLISFSIY
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFTVFLSMLASSLLHFFLLFNKYHRVFGILDHSAIYLLIAGTYTPFCLAVVGGVLGWTVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHH
GIIWGLAILNIVIKSVFFNKIPKSISTVGYIAMGWLSIVLVYSVYVRLGLLSIILMILGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFYTVGAGIFFAGKPNPKPPYFGNHEIWHIMVLLGNITFFAVMVFFVLPYPGP
HHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLKDKSKMDKMISSEESNEYVNSITHLVGAVLSIAGLVVLIVFSALQHKWVHLISFSIY
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFTVFLSMLASSLLHFFLLFNKYHRVFGILDHSAIYLLIAGTYTPFCLAVVGGVLGWTVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHH
GIIWGLAILNIVIKSVFFNKIPKSISTVGYIAMGWLSIVLVYSVYVRLGLLSIILMILGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFYTVGAGIFFAGKPNPKPPYFGNHEIWHIMVLLGNITFFAVMVFFVLPYPGP
HHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]