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The map label for this gene is yhaM [C]

Identifier: 239616995

GI number: 239616995

Start: 643145

End: 644413

Strand: Reverse

Name: yhaM [C]

Synonym: Kole_0595

Alternate gene names: 239616995

Gene position: 644413-643145 (Counterclockwise)

Preceding gene: 239616996

Following gene: 239616994

Centisome position: 27.99

GC content: 43.5

Gene sequence:

>1269_bases
GTGATCAGATTGACACAGTATTTACAGTCTGGTGTAAAGCCTGCTCTAGGATGTACGGAACCCGGTGCGATAGCCTTTGC
TGTTTCAAGAGCTTGTAAAGATTTGCCTGAAGATGAGATTTTGGAGAGCATAGAAGTTAAGACCAGCATAAACATTTATA
AGAATGGAATGTATGTGGTAATCCCGGGAACTAATGGAGCAAGGGGAAACAAGATTGCCGCGGCACTTGGGGCTATTTGT
GGTGATCCTTCATTGAAGCTCCGAGCGTTGAAATCATGCAATGATAGTCATATAGAAAAAGCGAAAAGAATGATAGCTTC
AGGTAAAGTGAAGCTATCATGTCTCAGGGATAAACCCGGAGTTTATATAGACGTAACGGTTAAAACAAGGAATCATGCTG
CAAGGTGTGTTATAGACGGCGATCACACCGCTATCTCTCTGGTTGCAAGAGATGGTGTGATTGTTTTCAAAGGTTCACAA
AGGGAACGGGAAGAGCCGGTTTTTTTTGAAGGGGAAAAATTTCCAATAGATGAAATAATAGAGACTGTCGAACGCATAGA
CGCCAAGGATGTAGATTTTATATTCGAAGGAGTAAAAATGAACCTCGAAATAGCCACGTATGCTATGAATGAGGGAATAT
CACTGTGCAAGCCGGTTAAAGAAAACAACAATTCAGAGGAAGAGCTTGCTATAAGGATAAAACGCTTCTGTGCAGCGGCT
TCATTTGCAAGAATGGCTGGGGTTCCATTGCCAGTAATGAGCAGTGGAGGAAGCGGGAACCAAGGAATAGTTACGATATT
GCCTGTCGCAATTACCGGGAAATCGTATGGGAAGACTCGAGAAGAAATCGCCAAAGCCATCGCATTGAGTCATCTGGTTT
TAGGGTATATTAAAAGCAGGCTAGGGAAGGTTACTCCGACTTGCGGCGCGGCAAATGCGGCGGGTCCGGCGGCTGCGGCG
GGAATTGTGTATATGCTCAACGGCTCAACAGAGCAGATCTCTCAAGCAATGAGCACTGTTTTCTCGAGCACCCTTGGAAT
GATCTGCGACGGTGCGAAAGAAGCCTGTGCTTACAAAGTGGGTTTTTCAGGTGAAGTAGCGTATAATTCAGCTATGCTCG
CTCTGGATAAATCTTGTGTTGCTGGTCCTCAGGGTGTTGTTGGTAAAACTATCGAAGAAACAATAGAAAATATTAGAGAG
ATCAGTACAAGAACAGCGTTAGAATTGGAAAATACTATAATCGATATTTTAGAGAAGTATAACAAATAG

Upstream 100 bases:

>100_bases
TTAACCTGGTTCTACGTGTTAGAATGATACCAAAGTCGGGTTTCTTATAGATAGATGACGCTAATCCATAAAAACAGAAA
GTATAGAGGGGAGAATAACG

Downstream 100 bases:

>100_bases
CGAAAGGAGGATGAAAGAATGTTCGATCCAGCAACATTTATATTTCAGCTCTTTTGGATGATACTGATATTCTCAATGTT
CATTCCATTTATGAGATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MIRLTQYLQSGVKPALGCTEPGAIAFAVSRACKDLPEDEILESIEVKTSINIYKNGMYVVIPGTNGARGNKIAAALGAIC
GDPSLKLRALKSCNDSHIEKAKRMIASGKVKLSCLRDKPGVYIDVTVKTRNHAARCVIDGDHTAISLVARDGVIVFKGSQ
REREEPVFFEGEKFPIDEIIETVERIDAKDVDFIFEGVKMNLEIATYAMNEGISLCKPVKENNNSEEELAIRIKRFCAAA
SFARMAGVPLPVMSSGGSGNQGIVTILPVAITGKSYGKTREEIAKAIALSHLVLGYIKSRLGKVTPTCGAANAAGPAAAA
GIVYMLNGSTEQISQAMSTVFSSTLGMICDGAKEACAYKVGFSGEVAYNSAMLALDKSCVAGPQGVVGKTIEETIENIRE
ISTRTALELENTIIDILEKYNK

Sequences:

>Translated_422_residues
MIRLTQYLQSGVKPALGCTEPGAIAFAVSRACKDLPEDEILESIEVKTSINIYKNGMYVVIPGTNGARGNKIAAALGAIC
GDPSLKLRALKSCNDSHIEKAKRMIASGKVKLSCLRDKPGVYIDVTVKTRNHAARCVIDGDHTAISLVARDGVIVFKGSQ
REREEPVFFEGEKFPIDEIIETVERIDAKDVDFIFEGVKMNLEIATYAMNEGISLCKPVKENNNSEEELAIRIKRFCAAA
SFARMAGVPLPVMSSGGSGNQGIVTILPVAITGKSYGKTREEIAKAIALSHLVLGYIKSRLGKVTPTCGAANAAGPAAAA
GIVYMLNGSTEQISQAMSTVFSSTLGMICDGAKEACAYKVGFSGEVAYNSAMLALDKSCVAGPQGVVGKTIEETIENIRE
ISTRTALELENTIIDILEKYNK
>Mature_422_residues
MIRLTQYLQSGVKPALGCTEPGAIAFAVSRACKDLPEDEILESIEVKTSINIYKNGMYVVIPGTNGARGNKIAAALGAIC
GDPSLKLRALKSCNDSHIEKAKRMIASGKVKLSCLRDKPGVYIDVTVKTRNHAARCVIDGDHTAISLVARDGVIVFKGSQ
REREEPVFFEGEKFPIDEIIETVERIDAKDVDFIFEGVKMNLEIATYAMNEGISLCKPVKENNNSEEELAIRIKRFCAAA
SFARMAGVPLPVMSSGGSGNQGIVTILPVAITGKSYGKTREEIAKAIALSHLVLGYIKSRLGKVTPTCGAANAAGPAAAA
GIVYMLNGSTEQISQAMSTVFSSTLGMICDGAKEACAYKVGFSGEVAYNSAMLALDKSCVAGPQGVVGKTIEETIENIRE
ISTRTALELENTIIDILEKYNK

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family

Homologues:

Organism=Escherichia coli, GI48994923, Length=426, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y595_KOSOT (C5CEY4)

Other databases:

- EMBL:   CP001634
- RefSeq:   YP_002940317.1
- GeneID:   7968789
- GenomeReviews:   CP001634_GR
- KEGG:   kol:Kole_0595
- ProtClustDB:   CLSK2814020
- HAMAP:   MF_01845
- InterPro:   IPR005130
- InterPro:   IPR021144
- PIRSF:   PIRSF006054

Pfam domain/function: PF03313 SDH_alpha

EC number: NA

Molecular weight: Translated: 45082; Mature: 45082

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLTQYLQSGVKPALGCTEPGAIAFAVSRACKDLPEDEILESIEVKTSINIYKNGMYVV
CCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEECCEEEE
IPGTNGARGNKIAAALGAICGDPSLKLRALKSCNDSHIEKAKRMIASGKVKLSCLRDKPG
EECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCC
VYIDVTVKTRNHAARCVIDGDHTAISLVARDGVIVFKGSQREREEPVFFEGEKFPIDEII
EEEEEEEEECCCCEEEEEECCCCEEEEEEECCEEEEECCCCCCCCCCEECCCCCCHHHHH
ETVERIDAKDVDFIFEGVKMNLEIATYAMNEGISLCKPVKENNNSEEELAIRIKRFCAAA
HHHHHCCCCCHHHHHHCCEEEEEEEEEEHHCCCHHHCCHHCCCCCHHHHHHHHHHHHHHH
SFARMAGVPLPVMSSGGSGNQGIVTILPVAITGKSYGKTREEIAKAIALSHLVLGYIKSR
HHHHHCCCCCCEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGKVTPTCGAANAAGPAAAAGIVYMLNGSTEQISQAMSTVFSSTLGMICDGAKEACAYKV
HCCCCCCCCCCCCCCCHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEE
GFSGEVAYNSAMLALDKSCVAGPQGVVGKTIEETIENIREISTRTALELENTIIDILEKY
CCCCCCHHCCCCEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NK
CC
>Mature Secondary Structure
MIRLTQYLQSGVKPALGCTEPGAIAFAVSRACKDLPEDEILESIEVKTSINIYKNGMYVV
CCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEECCEEEE
IPGTNGARGNKIAAALGAICGDPSLKLRALKSCNDSHIEKAKRMIASGKVKLSCLRDKPG
EECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCCC
VYIDVTVKTRNHAARCVIDGDHTAISLVARDGVIVFKGSQREREEPVFFEGEKFPIDEII
EEEEEEEEECCCCEEEEEECCCCEEEEEEECCEEEEECCCCCCCCCCEECCCCCCHHHHH
ETVERIDAKDVDFIFEGVKMNLEIATYAMNEGISLCKPVKENNNSEEELAIRIKRFCAAA
HHHHHCCCCCHHHHHHCCEEEEEEEEEEHHCCCHHHCCHHCCCCCHHHHHHHHHHHHHHH
SFARMAGVPLPVMSSGGSGNQGIVTILPVAITGKSYGKTREEIAKAIALSHLVLGYIKSR
HHHHHCCCCCCEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
LGKVTPTCGAANAAGPAAAAGIVYMLNGSTEQISQAMSTVFSSTLGMICDGAKEACAYKV
HCCCCCCCCCCCCCCCHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEE
GFSGEVAYNSAMLALDKSCVAGPQGVVGKTIEETIENIREISTRTALELENTIIDILEKY
CCCCCCHHCCCCEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA