| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is purH [H]
Identifier: 239616698
GI number: 239616698
Start: 316091
End: 317470
Strand: Direct
Name: purH [H]
Synonym: Kole_0291
Alternate gene names: 239616698
Gene position: 316091-317470 (Clockwise)
Preceding gene: 239616696
Following gene: 239616700
Centisome position: 13.73
GC content: 39.06
Gene sequence:
>1380_bases TTGAATATCCACAAGGTTTTTGTAAGCGCCAGAATTACCGATGGTCTGGAAAACCTCTGTTCAAAACTGATATCAAAAGG TGCTGAAATCATCGCCGATGAAAGCACCTACGCATTTCTTAAGTTGAAAAAGATCACTGTTAAAAACCTTCGGGAATTCT TTGAAACCGAAGTAGCAGACGATTTTGCTCTTCAAAGAAGGATTGTTTCATGTTTGTCGGGAGCAAATGAAGAAAAAGCC ACCTGTGGTAGTAATAATAAACACATTGATCTATTGGTGGTGAACTTCGAACCATTCTCCACATACGTTGAAAAGACCGG CAACGAAACCGAATTGGTAGAACATATAGATTCTTTCAAGCCTTCACTGGTATTATCAGCAGCAAAAAATTATAGAAATG TTGTGGTTTTGTGTGATCCTGAAGATTACGAAGACGTGCTCGAGGACCTCGAATATTACGGTGATGTGTCACTGCAGCGG AGACGAAAACTGGCTCTGAAAGCGCTTTATCTTTTATCTGCATATACTTCGGAAATCTATAGTGTGTTCTCTGAGATCTT TGCCGAGGAAAAATACAATTATCTTATTCTCGAAAAAATTATGCCACTTATGTTCGGAGAGATGTCGTTAAAAAAATCTA CCCTTTACAAAGTGAGCGGAATTTGCGGGATTCTCGATGACGTCCACATAGCCAATCCATCAGTGGCCATGAATCACTCC CATATTCGCAGCGTCCTCCAATTTATGAGGCTCTATTACTTCTTCGGAGACGTCTCAGCCTTTATATCAGACGGAAAATT GATCGAGGTATCTTTAAGAGGCAACATGGAAACAATTCACCATGGTGAAAGCGTCATGTATGGTTCGTCATTTCCAATTA GTTACCCAATGATAAAAAGATTATACGCAACAGGTGTAAAAAGCTTCTGTGGAGTATTCGAAAAAGAGGCTGTCAGATAT GCTCACGATAACGATATCCTCCTGCTCACAATACCGGAAAGGAATTCTCTTTCAGTTGCAAAATTCAATTTTGTGGGTTT TGAGAACTATATAGCCCTAGAAGAAAACAAATTCCCGAAAATGGATAGATTTTCCTCGACAGAAAAACTCGCAGTTATTA CCTCATACTTTAATCCAAAAATTTCCCTCGCACTGGTTGAAACTGACAATGAACATTCTATAACGATCAATGTAGACTCT GAAAACAGGCTCAGAACAGCTATTTTCGGATTTAATTCCTTGAATGGATATGTCCTGGCCTGTAATGTTGATCTGAGTGA TGAAACGGTAGAACTTTTGAGATCAAAAGGAGTCAACAAAATGTATCTGCCATGCGTTAGCAAAACCTACAACTCAGTAG ACATTATTCCTATAATCTGA
Upstream 100 bases:
>100_bases AATACATGAACTATTGCTTCAAATTTACACAAATTCAGAGAAGAAAGTCAAGGAAAACACGTTCACGTTTGATAAAATTT CTTTGACTGGGGGTGAAACT
Downstream 100 bases:
>100_bases GTTCAAGCGGTTGAATATAACCCTTCGAGGTATTATAATGATTATGCACCATGCTAGGCGGGGAGCTGGCGGTTCCCTGT ACCCGAAATCCGCCATATGC
Product: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)-like protein
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MNIHKVFVSARITDGLENLCSKLISKGAEIIADESTYAFLKLKKITVKNLREFFETEVADDFALQRRIVSCLSGANEEKA TCGSNNKHIDLLVVNFEPFSTYVEKTGNETELVEHIDSFKPSLVLSAAKNYRNVVVLCDPEDYEDVLEDLEYYGDVSLQR RRKLALKALYLLSAYTSEIYSVFSEIFAEEKYNYLILEKIMPLMFGEMSLKKSTLYKVSGICGILDDVHIANPSVAMNHS HIRSVLQFMRLYYFFGDVSAFISDGKLIEVSLRGNMETIHHGESVMYGSSFPISYPMIKRLYATGVKSFCGVFEKEAVRY AHDNDILLLTIPERNSLSVAKFNFVGFENYIALEENKFPKMDRFSSTEKLAVITSYFNPKISLALVETDNEHSITINVDS ENRLRTAIFGFNSLNGYVLACNVDLSDETVELLRSKGVNKMYLPCVSKTYNSVDIIPII
Sequences:
>Translated_459_residues MNIHKVFVSARITDGLENLCSKLISKGAEIIADESTYAFLKLKKITVKNLREFFETEVADDFALQRRIVSCLSGANEEKA TCGSNNKHIDLLVVNFEPFSTYVEKTGNETELVEHIDSFKPSLVLSAAKNYRNVVVLCDPEDYEDVLEDLEYYGDVSLQR RRKLALKALYLLSAYTSEIYSVFSEIFAEEKYNYLILEKIMPLMFGEMSLKKSTLYKVSGICGILDDVHIANPSVAMNHS HIRSVLQFMRLYYFFGDVSAFISDGKLIEVSLRGNMETIHHGESVMYGSSFPISYPMIKRLYATGVKSFCGVFEKEAVRY AHDNDILLLTIPERNSLSVAKFNFVGFENYIALEENKFPKMDRFSSTEKLAVITSYFNPKISLALVETDNEHSITINVDS ENRLRTAIFGFNSLNGYVLACNVDLSDETVELLRSKGVNKMYLPCVSKTYNSVDIIPII >Mature_459_residues MNIHKVFVSARITDGLENLCSKLISKGAEIIADESTYAFLKLKKITVKNLREFFETEVADDFALQRRIVSCLSGANEEKA TCGSNNKHIDLLVVNFEPFSTYVEKTGNETELVEHIDSFKPSLVLSAAKNYRNVVVLCDPEDYEDVLEDLEYYGDVSLQR RRKLALKALYLLSAYTSEIYSVFSEIFAEEKYNYLILEKIMPLMFGEMSLKKSTLYKVSGICGILDDVHIANPSVAMNHS HIRSVLQFMRLYYFFGDVSAFISDGKLIEVSLRGNMETIHHGESVMYGSSFPISYPMIKRLYATGVKSFCGVFEKEAVRY AHDNDILLLTIPERNSLSVAKFNFVGFENYIALEENKFPKMDRFSSTEKLAVITSYFNPKISLALVETDNEHSITINVDS ENRLRTAIFGFNSLNGYVLACNVDLSDETVELLRSKGVNKMYLPCVSKTYNSVDIIPII
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Escherichia coli, GI1790439, Length=102, Percent_Identity=35.2941176470588, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323056, Length=119, Percent_Identity=35.2941176470588, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6323768, Length=102, Percent_Identity=37.2549019607843, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 52023; Mature: 52023
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIHKVFVSARITDGLENLCSKLISKGAEIIADESTYAFLKLKKITVKNLREFFETEVAD CCHHEEEEEEHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHH DFALQRRIVSCLSGANEEKATCGSNNKHIDLLVVNFEPFSTYVEKTGNETELVEHIDSFK HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHCCCCHHHHHHHHHHCC PSLVLSAAKNYRNVVVLCDPEDYEDVLEDLEYYGDVSLQRRRKLALKALYLLSAYTSEIY CHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SVFSEIFAEEKYNYLILEKIMPLMFGEMSLKKSTLYKVSGICGILDDVHIANPSVAMNHS HHHHHHHHHCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEECCCCEEECHH HIRSVLQFMRLYYFFGDVSAFISDGKLIEVSLRGNMETIHHGESVMYGSSFPISYPMIKR HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCEEEECCCCCCCHHHHHH LYATGVKSFCGVFEKEAVRYAHDNDILLLTIPERNSLSVAKFNFVGFENYIALEENKFPK HHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCC MDRFSSTEKLAVITSYFNPKISLALVETDNEHSITINVDSENRLRTAIFGFNSLNGYVLA CCCCCCCCEEEEEEEECCCEEEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCEEEE CNVDLSDETVELLRSKGVNKMYLPCVSKTYNSVDIIPII EEECCCHHHHHHHHHCCCCEEEECCHHCCCCCEEEEEEC >Mature Secondary Structure MNIHKVFVSARITDGLENLCSKLISKGAEIIADESTYAFLKLKKITVKNLREFFETEVAD CCHHEEEEEEHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHH DFALQRRIVSCLSGANEEKATCGSNNKHIDLLVVNFEPFSTYVEKTGNETELVEHIDSFK HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHCCCCHHHHHHHHHHCC PSLVLSAAKNYRNVVVLCDPEDYEDVLEDLEYYGDVSLQRRRKLALKALYLLSAYTSEIY CHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SVFSEIFAEEKYNYLILEKIMPLMFGEMSLKKSTLYKVSGICGILDDVHIANPSVAMNHS HHHHHHHHHCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEECCCCEEECHH HIRSVLQFMRLYYFFGDVSAFISDGKLIEVSLRGNMETIHHGESVMYGSSFPISYPMIKR HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCEEEECCCCCCCHHHHHH LYATGVKSFCGVFEKEAVRYAHDNDILLLTIPERNSLSVAKFNFVGFENYIALEENKFPK HHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCC MDRFSSTEKLAVITSYFNPKISLALVETDNEHSITINVDSENRLRTAIFGFNSLNGYVLA CCCCCCCCEEEEEEEECCCEEEEEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCEEEE CNVDLSDETVELLRSKGVNKMYLPCVSKTYNSVDIIPII EEECCCHHHHHHHHHCCCCEEEECCHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA